Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A258:A620
Extra
PDB:
ATOM 1 O3' G A 257 -86.743 -64.719 81.801 1.00 0.01 O
ATOM 2 P G A 258 -85.395 -65.349 82.432 1.00 0.01 P
ATOM 3 OP1 G A 258 -85.687 -65.647 83.856 1.00 0.01 O
ATOM 4 OP2 G A 258 -84.271 -64.429 82.114 1.00 0.01 O
ATOM 5 O5' G A 258 -85.231 -66.703 81.623 1.00 0.01 O
ATOM 6 C5' G A 258 -86.163 -67.739 81.800 1.00 0.01 C
ATOM 7 C4' G A 258 -85.944 -68.863 80.835 1.00 0.01 C
ATOM 8 O4' G A 258 -86.063 -68.402 79.470 1.00 0.01 O
ATOM 9 C3' G A 258 -84.591 -69.542 80.840 1.00 0.01 C
ATOM 10 O3' G A 258 -84.392 -70.362 81.963 1.00 0.01 O
ATOM 11 C2' G A 258 -84.699 -70.327 79.566 1.00 0.01 C
ATOM 12 O2' G A 258 -85.622 -71.399 79.743 1.00 0.01 O
ATOM 13 C1' G A 258 -85.329 -69.274 78.645 1.00 0.01 C
ATOM 14 N9 G A 258 -84.305 -68.501 77.962 1.00 0.01 N
ATOM 15 C8 G A 258 -83.893 -67.224 78.179 1.00 0.01 C
ATOM 16 N7 G A 258 -82.909 -66.886 77.399 1.00 0.01 N
ATOM 17 C5 G A 258 -82.662 -68.022 76.657 1.00 0.01 C
ATOM 18 C6 G A 258 -81.720 -68.304 75.647 1.00 0.01 C
ATOM 19 O6 G A 258 -80.870 -67.581 75.157 1.00 0.01 O
ATOM 20 N1 G A 258 -81.812 -69.590 75.163 1.00 0.01 N
ATOM 21 C2 G A 258 -82.720 -70.497 75.607 1.00 0.01 C
ATOM 22 N2 G A 258 -82.684 -71.694 75.021 1.00 0.01 N
ATOM 23 N3 G A 258 -83.600 -70.258 76.558 1.00 0.01 N
ATOM 24 C4 G A 258 -83.511 -69.016 77.017 1.00 0.01 C
ATOM 25 P G A 259 -82.917 -70.730 82.463 1.00 0.01 P
ATOM 26 OP1 G A 259 -83.067 -71.464 83.737 1.00 0.01 O
ATOM 27 OP2 G A 259 -82.111 -69.498 82.441 1.00 0.01 O
ATOM 28 O5' G A 259 -82.420 -71.708 81.340 1.00 0.01 O
TER
ATOM 1 O3' G B 619 -88.178 -79.097 78.362 1.00 0.01 O
ATOM 2 P A B 620 -88.291 -77.718 79.156 1.00 0.01 P
ATOM 3 OP1 A B 620 -88.425 -78.059 80.602 1.00 0.01 O
ATOM 4 OP2 A B 620 -89.374 -76.944 78.490 1.00 0.01 O
ATOM 5 O5' A B 620 -86.889 -76.999 78.919 1.00 0.01 O
ATOM 6 C5' A B 620 -86.642 -75.739 79.536 1.00 0.01 C
ATOM 7 C4' A B 620 -85.796 -74.805 78.684 1.00 0.01 C
ATOM 8 O4' A B 620 -84.714 -75.528 78.075 1.00 0.01 O
ATOM 9 C3' A B 620 -86.458 -74.139 77.488 1.00 0.01 C
ATOM 10 O3' A B 620 -87.319 -73.088 77.815 1.00 0.01 O
ATOM 11 C2' A B 620 -85.264 -73.691 76.706 1.00 0.01 C
ATOM 12 O2' A B 620 -84.645 -72.607 77.348 1.00 0.01 O
ATOM 13 C1' A B 620 -84.370 -74.897 76.862 1.00 0.01 C
ATOM 14 N9 A B 620 -84.557 -75.834 75.751 1.00 0.01 N
ATOM 15 C8 A B 620 -85.100 -77.083 75.660 1.00 0.01 C
ATOM 16 N7 A B 620 -85.047 -77.549 74.432 1.00 0.01 N
ATOM 17 C5 A B 620 -84.426 -76.544 73.693 1.00 0.01 C
ATOM 18 C6 A B 620 -84.067 -76.394 72.341 1.00 0.01 C
ATOM 19 N6 A B 620 -84.267 -77.281 71.378 1.00 0.01 N
ATOM 20 N1 A B 620 -83.465 -75.255 71.986 1.00 0.01 N
ATOM 21 C2 A B 620 -83.235 -74.339 72.926 1.00 0.01 C
ATOM 22 N3 A B 620 -83.540 -74.346 74.198 1.00 0.01 N
ATOM 23 C4 A B 620 -84.133 -75.487 74.510 1.00 0.01 C
ATOM 24 P G B 621 -88.877 -73.291 77.642 1.00 0.01 P
ATOM 25 OP1 G B 621 -89.509 -72.035 78.061 1.00 0.01 O
ATOM 26 OP2 G B 621 -89.225 -74.533 78.362 1.00 0.01 O
ATOM 27 O5' G B 621 -89.053 -73.523 76.067 1.00 0.01 O
TER
ATOM 2 P G A 258 -85.395 -65.349 82.432 1.00 0.01 P
ATOM 3 OP1 G A 258 -85.687 -65.647 83.856 1.00 0.01 O
ATOM 4 OP2 G A 258 -84.271 -64.429 82.114 1.00 0.01 O
ATOM 5 O5' G A 258 -85.231 -66.703 81.623 1.00 0.01 O
ATOM 6 C5' G A 258 -86.163 -67.739 81.800 1.00 0.01 C
ATOM 7 C4' G A 258 -85.944 -68.863 80.835 1.00 0.01 C
ATOM 8 O4' G A 258 -86.063 -68.402 79.470 1.00 0.01 O
ATOM 9 C3' G A 258 -84.591 -69.542 80.840 1.00 0.01 C
ATOM 10 O3' G A 258 -84.392 -70.362 81.963 1.00 0.01 O
ATOM 11 C2' G A 258 -84.699 -70.327 79.566 1.00 0.01 C
ATOM 12 O2' G A 258 -85.622 -71.399 79.743 1.00 0.01 O
ATOM 13 C1' G A 258 -85.329 -69.274 78.645 1.00 0.01 C
ATOM 14 N9 G A 258 -84.305 -68.501 77.962 1.00 0.01 N
ATOM 15 C8 G A 258 -83.893 -67.224 78.179 1.00 0.01 C
ATOM 16 N7 G A 258 -82.909 -66.886 77.399 1.00 0.01 N
ATOM 17 C5 G A 258 -82.662 -68.022 76.657 1.00 0.01 C
ATOM 18 C6 G A 258 -81.720 -68.304 75.647 1.00 0.01 C
ATOM 19 O6 G A 258 -80.870 -67.581 75.157 1.00 0.01 O
ATOM 20 N1 G A 258 -81.812 -69.590 75.163 1.00 0.01 N
ATOM 21 C2 G A 258 -82.720 -70.497 75.607 1.00 0.01 C
ATOM 22 N2 G A 258 -82.684 -71.694 75.021 1.00 0.01 N
ATOM 23 N3 G A 258 -83.600 -70.258 76.558 1.00 0.01 N
ATOM 24 C4 G A 258 -83.511 -69.016 77.017 1.00 0.01 C
ATOM 25 P G A 259 -82.917 -70.730 82.463 1.00 0.01 P
ATOM 26 OP1 G A 259 -83.067 -71.464 83.737 1.00 0.01 O
ATOM 27 OP2 G A 259 -82.111 -69.498 82.441 1.00 0.01 O
ATOM 28 O5' G A 259 -82.420 -71.708 81.340 1.00 0.01 O
TER
ATOM 1 O3' G B 619 -88.178 -79.097 78.362 1.00 0.01 O
ATOM 2 P A B 620 -88.291 -77.718 79.156 1.00 0.01 P
ATOM 3 OP1 A B 620 -88.425 -78.059 80.602 1.00 0.01 O
ATOM 4 OP2 A B 620 -89.374 -76.944 78.490 1.00 0.01 O
ATOM 5 O5' A B 620 -86.889 -76.999 78.919 1.00 0.01 O
ATOM 6 C5' A B 620 -86.642 -75.739 79.536 1.00 0.01 C
ATOM 7 C4' A B 620 -85.796 -74.805 78.684 1.00 0.01 C
ATOM 8 O4' A B 620 -84.714 -75.528 78.075 1.00 0.01 O
ATOM 9 C3' A B 620 -86.458 -74.139 77.488 1.00 0.01 C
ATOM 10 O3' A B 620 -87.319 -73.088 77.815 1.00 0.01 O
ATOM 11 C2' A B 620 -85.264 -73.691 76.706 1.00 0.01 C
ATOM 12 O2' A B 620 -84.645 -72.607 77.348 1.00 0.01 O
ATOM 13 C1' A B 620 -84.370 -74.897 76.862 1.00 0.01 C
ATOM 14 N9 A B 620 -84.557 -75.834 75.751 1.00 0.01 N
ATOM 15 C8 A B 620 -85.100 -77.083 75.660 1.00 0.01 C
ATOM 16 N7 A B 620 -85.047 -77.549 74.432 1.00 0.01 N
ATOM 17 C5 A B 620 -84.426 -76.544 73.693 1.00 0.01 C
ATOM 18 C6 A B 620 -84.067 -76.394 72.341 1.00 0.01 C
ATOM 19 N6 A B 620 -84.267 -77.281 71.378 1.00 0.01 N
ATOM 20 N1 A B 620 -83.465 -75.255 71.986 1.00 0.01 N
ATOM 21 C2 A B 620 -83.235 -74.339 72.926 1.00 0.01 C
ATOM 22 N3 A B 620 -83.540 -74.346 74.198 1.00 0.01 N
ATOM 23 C4 A B 620 -84.133 -75.487 74.510 1.00 0.01 C
ATOM 24 P G B 621 -88.877 -73.291 77.642 1.00 0.01 P
ATOM 25 OP1 G B 621 -89.509 -72.035 78.061 1.00 0.01 O
ATOM 26 OP2 G B 621 -89.225 -74.533 78.362 1.00 0.01 O
ATOM 27 O5' G B 621 -89.053 -73.523 76.067 1.00 0.01 O
TER
Atoms:
OP1: (-85.687,-65.647,83.856)
OP2: (-84.271,-64.429,82.114)
C3': (-84.591,-69.542,80.840)
C1': (-85.329,-69.274,78.645)
C5': (-86.163,-67.739,81.800)
O6: (-80.870,-67.581,75.157)
O4': (-86.063,-68.402,79.470)
C8: (-83.893,-67.224,78.179)
C2: (-82.720,-70.497,75.607)
C6: (-81.720,-68.304,75.647)
C5: (-82.662,-68.022,76.657)
C4: (-83.511,-69.016,77.017)
P: (-85.395,-65.349,82.432)
C4': (-85.944,-68.863,80.835)
C2': (-84.699,-70.327,79.566)
O2': (-85.622,-71.399,79.743)
N1: (-81.812,-69.590,75.163)
N2: (-82.684,-71.694,75.021)
N3: (-83.600,-70.258,76.558)
N7: (-82.909,-66.886,77.399)
N9: (-84.305,-68.501,77.962)
O5': (-85.231,-66.703,81.623)
O3': (-84.392,-70.362,81.963)
OP2: (-84.271,-64.429,82.114)
C3': (-84.591,-69.542,80.840)
C1': (-85.329,-69.274,78.645)
C5': (-86.163,-67.739,81.800)
O6: (-80.870,-67.581,75.157)
O4': (-86.063,-68.402,79.470)
C8: (-83.893,-67.224,78.179)
C2: (-82.720,-70.497,75.607)
C6: (-81.720,-68.304,75.647)
C5: (-82.662,-68.022,76.657)
C4: (-83.511,-69.016,77.017)
P: (-85.395,-65.349,82.432)
C4': (-85.944,-68.863,80.835)
C2': (-84.699,-70.327,79.566)
O2': (-85.622,-71.399,79.743)
N1: (-81.812,-69.590,75.163)
N2: (-82.684,-71.694,75.021)
N3: (-83.600,-70.258,76.558)
N7: (-82.909,-66.886,77.399)
N9: (-84.305,-68.501,77.962)
O5': (-85.231,-66.703,81.623)
O3': (-84.392,-70.362,81.963)
OP1: (-88.425,-78.059,80.602)
OP2: (-89.374,-76.944,78.490)
C3': (-86.458,-74.139,77.488)
C1': (-84.370,-74.897,76.862)
C5': (-86.642,-75.739,79.536)
O4': (-84.714,-75.528,78.075)
C8: (-85.100,-77.083,75.660)
O2': (-84.645,-72.607,77.348)
C6: (-84.067,-76.394,72.341)
C5: (-84.426,-76.544,73.693)
C4: (-84.133,-75.487,74.510)
P: (-88.291,-77.718,79.156)
C4': (-85.796,-74.805,78.684)
C2': (-85.264,-73.691,76.706)
C2: (-83.235,-74.339,72.926)
N1: (-83.465,-75.255,71.986)
N3: (-83.540,-74.346,74.198)
N6: (-84.267,-77.281,71.378)
N7: (-85.047,-77.549,74.432)
N9: (-84.557,-75.834,75.751)
O5': (-86.889,-76.999,78.919)
O3': (-87.319,-73.088,77.815)
OP2: (-89.374,-76.944,78.490)
C3': (-86.458,-74.139,77.488)
C1': (-84.370,-74.897,76.862)
C5': (-86.642,-75.739,79.536)
O4': (-84.714,-75.528,78.075)
C8: (-85.100,-77.083,75.660)
O2': (-84.645,-72.607,77.348)
C6: (-84.067,-76.394,72.341)
C5: (-84.426,-76.544,73.693)
C4: (-84.133,-75.487,74.510)
P: (-88.291,-77.718,79.156)
C4': (-85.796,-74.805,78.684)
C2': (-85.264,-73.691,76.706)
C2: (-83.235,-74.339,72.926)
N1: (-83.465,-75.255,71.986)
N3: (-83.540,-74.346,74.198)
N6: (-84.267,-77.281,71.378)
N7: (-85.047,-77.549,74.432)
N9: (-84.557,-75.834,75.751)
O5': (-86.889,-76.999,78.919)
O3': (-87.319,-73.088,77.815)
Image (generated by PyMOL):