ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02468:01953

Extra

PDB:
ATOM 1 O3' C A2467 101.591 119.032 97.135 1.00 47.31 O
ATOM 2 P G A2468 101.908 117.585 96.509 1.00 47.42 P
ATOM 3 OP1 G A2468 103.380 117.411 96.614 1.00 51.63 O
ATOM 4 OP2 G A2468 101.252 117.463 95.185 1.00 47.30 O
ATOM 5 O5' G A2468 101.214 116.576 97.526 1.00 47.68 O
ATOM 6 C5' G A2468 101.723 116.404 98.862 1.00 44.84 C
ATOM 7 C4' G A2468 100.847 115.444 99.632 1.00 45.23 C
ATOM 8 O4' G A2468 99.555 116.052 99.899 1.00 44.55 O
ATOM 9 C3' G A2468 100.505 114.160 98.894 1.00 46.28 C
ATOM 10 O3' G A2468 101.539 113.203 98.999 1.00 48.47 O
ATOM 11 C2' G A2468 99.225 113.729 99.585 1.00 44.07 C
ATOM 12 O2' G A2468 99.493 113.176 100.851 1.00 44.37 O
ATOM 13 C1' G A2468 98.529 115.078 99.767 1.00 44.36 C
ATOM 14 N9 G A2468 97.724 115.447 98.605 1.00 45.40 N
ATOM 15 C8 G A2468 98.147 116.159 97.507 1.00 44.10 C
ATOM 16 N7 G A2468 97.204 116.356 96.630 1.00 44.93 N
ATOM 17 C5 G A2468 96.089 115.730 97.173 1.00 43.63 C
ATOM 18 C6 G A2468 94.763 115.603 96.664 1.00 42.73 C
ATOM 19 O6 G A2468 94.301 116.035 95.605 1.00 38.45 O
ATOM 20 N1 G A2468 93.949 114.885 97.529 1.00 42.25 N
ATOM 21 C2 G A2468 94.352 114.351 98.730 1.00 44.53 C
ATOM 22 N2 G A2468 93.414 113.686 99.425 1.00 43.01 N
ATOM 23 N3 G A2468 95.585 114.461 99.217 1.00 45.66 N
ATOM 24 C4 G A2468 96.393 115.159 98.391 1.00 44.37 C
ATOM 25 P U A2469 101.771 112.160 97.809 1.00 50.27 P
ATOM 26 OP1 U A2469 102.966 111.363 98.167 1.00 52.47 O
ATOM 27 OP2 U A2469 101.739 112.888 96.514 1.00 51.13 O
ATOM 28 O5' U A2469 100.484 111.223 97.871 1.00 51.69 O
TER

ATOM 1 O3' C B1952 100.972 106.119 106.350 1.00 75.14 O
ATOM 2 P A B1953 101.447 105.885 104.830 1.00 75.41 P
ATOM 3 OP1 A B1953 100.247 105.653 103.981 1.00 74.41 O
ATOM 4 OP2 A B1953 102.536 104.872 104.860 1.00 75.25 O
ATOM 5 O5' A B1953 102.084 107.284 104.420 1.00 75.22 O
ATOM 6 C5' A B1953 102.814 107.438 103.193 1.00 72.74 C
ATOM 7 C4' A B1953 102.551 108.803 102.601 1.00 71.46 C
ATOM 8 O4' A B1953 101.199 108.862 102.070 1.00 70.01 O
ATOM 9 C3' A B1953 102.675 109.980 103.560 1.00 70.48 C
ATOM 10 O3' A B1953 103.129 111.096 102.816 1.00 71.58 O
ATOM 11 C2' A B1953 101.229 110.204 103.998 1.00 69.47 C
ATOM 12 O2' A B1953 100.979 111.530 104.427 1.00 68.73 O
ATOM 13 C1' A B1953 100.479 109.904 102.701 1.00 67.94 C
ATOM 14 N9 A B1953 99.097 109.453 102.862 1.00 66.39 N
ATOM 15 C8 A B1953 98.661 108.241 103.340 1.00 65.97 C
ATOM 16 N7 A B1953 97.359 108.100 103.310 1.00 66.11 N
ATOM 17 C5 A B1953 96.905 109.303 102.790 1.00 65.12 C
ATOM 18 C6 A B1953 95.618 109.777 102.500 1.00 65.86 C
ATOM 19 N6 A B1953 94.509 109.059 102.693 1.00 67.74 N
ATOM 20 N1 A B1953 95.505 111.027 101.995 1.00 65.03 N
ATOM 21 C2 A B1953 96.620 111.737 101.797 1.00 64.12 C
ATOM 22 N3 A B1953 97.885 111.398 102.027 1.00 63.71 N
ATOM 23 C4 A B1953 97.962 110.153 102.526 1.00 64.86 C
ATOM 24 P U B1954 104.502 111.815 103.217 1.00 72.46 P
ATOM 25 OP1 U B1954 105.626 111.113 102.530 1.00 70.81 O
ATOM 26 OP2 U B1954 104.528 111.979 104.689 1.00 72.69 O
ATOM 27 O5' U B1954 104.328 113.274 102.610 1.00 70.93 O
TER

Atoms:
OP1: (103.380,117.411,96.614)
OP2: (101.252,117.463,95.185)
C3': (100.505,114.160,98.894)
C1': (98.529,115.078,99.767)
C5': (101.723,116.404,98.862)
O6: (94.301,116.035,95.605)
O4': (99.555,116.052,99.899)
C8: (98.147,116.159,97.507)
C2: (94.352,114.351,98.730)
C6: (94.763,115.603,96.664)
C5: (96.089,115.730,97.173)
C4: (96.393,115.159,98.391)
P: (101.908,117.585,96.509)
C4': (100.847,115.444,99.632)
C2': (99.225,113.729,99.585)
O2': (99.493,113.176,100.851)
N1: (93.949,114.885,97.529)
N2: (93.414,113.686,99.425)
N3: (95.585,114.461,99.217)
N7: (97.204,116.356,96.630)
N9: (97.724,115.447,98.605)
O5': (101.214,116.576,97.526)
O3': (101.539,113.203,98.999)
OP1: (100.247,105.653,103.981)
OP2: (102.536,104.872,104.860)
C3': (102.675,109.980,103.560)
C1': (100.479,109.904,102.701)
C5': (102.814,107.438,103.193)
O4': (101.199,108.862,102.070)
C8: (98.661,108.241,103.340)
O2': (100.979,111.530,104.427)
C6: (95.618,109.777,102.500)
C5: (96.905,109.303,102.790)
C4: (97.962,110.153,102.526)
P: (101.447,105.885,104.830)
C4': (102.551,108.803,102.601)
C2': (101.229,110.204,103.998)
C2: (96.620,111.737,101.797)
N1: (95.505,111.027,101.995)
N3: (97.885,111.398,102.027)
N6: (94.509,109.059,102.693)
N7: (97.359,108.100,103.310)
N9: (99.097,109.453,102.862)
O5': (102.084,107.284,104.420)
O3': (103.129,111.096,102.816)
Image (generated by PyMOL):
PyMOL image
show in jmol