Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1239:A1236
Extra
PDB:
ATOM 1 O3' U A1238 -93.953 138.271 56.157 1.00 71.01 O
ATOM 2 P G A1239 -95.517 137.984 55.993 1.00 70.18 P
ATOM 3 OP1 G A1239 -95.659 136.576 55.548 1.00 70.18 O
ATOM 4 OP2 G A1239 -96.063 139.064 55.140 1.00 70.18 O
ATOM 5 O5' G A1239 -96.067 138.142 57.476 1.00 70.18 O
ATOM 6 C5' G A1239 -95.677 137.245 58.504 1.00 70.18 C
ATOM 7 C4' G A1239 -96.492 137.472 59.743 1.00 70.18 C
ATOM 8 O4' G A1239 -96.412 138.874 60.117 1.00 70.18 O
ATOM 9 C3' G A1239 -97.981 137.196 59.597 1.00 70.18 C
ATOM 10 O3' G A1239 -98.308 135.833 59.806 1.00 70.18 O
ATOM 11 C2' G A1239 -98.606 138.137 60.612 1.00 70.18 C
ATOM 12 O2' G A1239 -98.525 137.593 61.920 1.00 70.18 O
ATOM 13 C1' G A1239 -97.676 139.346 60.516 1.00 70.18 C
ATOM 14 N9 G A1239 -98.136 140.328 59.510 1.00 70.13 N
ATOM 15 C8 G A1239 -97.654 140.438 58.227 1.00 70.13 C
ATOM 16 N7 G A1239 -98.214 141.388 57.533 1.00 70.13 N
ATOM 17 C5 G A1239 -99.130 141.958 58.408 1.00 70.13 C
ATOM 18 C6 G A1239 -100.035 143.047 58.208 1.00 70.13 C
ATOM 19 O6 G A1239 -100.207 143.734 57.184 1.00 70.13 O
ATOM 20 N1 G A1239 -100.783 143.302 59.364 1.00 70.13 N
ATOM 21 C2 G A1239 -100.673 142.602 60.540 1.00 70.13 C
ATOM 22 N2 G A1239 -101.473 143.002 61.527 1.00 70.13 N
ATOM 23 N3 G A1239 -99.839 141.594 60.743 1.00 70.13 N
ATOM 24 C4 G A1239 -99.094 141.320 59.642 1.00 70.13 C
ATOM 25 P G A1240 -99.628 135.205 59.140 1.00 69.54 P
ATOM 26 OP1 G A1240 -99.549 133.740 59.316 1.00 69.54 O
ATOM 27 OP2 G A1240 -99.723 135.757 57.760 1.00 69.54 O
ATOM 28 O5' G A1240 -100.795 135.792 60.055 1.00 69.54 O
TER
ATOM 1 O3' C B1235 -94.721 137.599 69.472 1.00 55.90 O
ATOM 2 P A B1236 -93.605 138.741 69.505 1.00 50.76 P
ATOM 3 OP1 A B1236 -92.304 138.070 69.679 1.00 50.76 O
ATOM 4 OP2 A B1236 -94.045 139.732 70.529 1.00 50.76 O
ATOM 5 O5' A B1236 -93.696 139.384 68.039 1.00 50.76 O
ATOM 6 C5' A B1236 -92.811 138.988 66.996 1.00 50.76 C
ATOM 7 C4' A B1236 -93.545 138.277 65.882 1.00 50.76 C
ATOM 8 O4' A B1236 -94.738 137.641 66.406 1.00 50.76 O
ATOM 9 C3' A B1236 -94.075 139.149 64.756 1.00 50.76 C
ATOM 10 O3' A B1236 -93.088 139.506 63.815 1.00 50.76 O
ATOM 11 C2' A B1236 -95.177 138.286 64.173 1.00 50.76 C
ATOM 12 O2' A B1236 -94.632 137.227 63.393 1.00 50.76 O
ATOM 13 C1' A B1236 -95.776 137.698 65.442 1.00 50.76 C
ATOM 14 N9 A B1236 -96.880 138.537 65.975 1.00 51.55 N
ATOM 15 C8 A B1236 -96.995 139.067 67.249 1.00 51.55 C
ATOM 16 N7 A B1236 -98.083 139.777 67.457 1.00 51.55 N
ATOM 17 C5 A B1236 -98.741 139.715 66.237 1.00 51.55 C
ATOM 18 C6 A B1236 -99.953 140.273 65.815 1.00 51.55 C
ATOM 19 N6 A B1236 -100.704 141.008 66.630 1.00 51.55 N
ATOM 20 N1 A B1236 -100.364 140.053 64.547 1.00 51.55 N
ATOM 21 C2 A B1236 -99.583 139.307 63.759 1.00 51.55 C
ATOM 22 N3 A B1236 -98.414 138.723 64.040 1.00 51.55 N
ATOM 23 C4 A B1236 -98.031 138.961 65.314 1.00 51.55 C
ATOM 24 P A B1237 -92.713 141.050 63.610 1.00 73.36 P
ATOM 25 OP1 A B1237 -91.402 141.097 62.903 1.00 73.36 O
ATOM 26 OP2 A B1237 -92.842 141.705 64.941 1.00 73.36 O
ATOM 27 O5' A B1237 -93.856 141.574 62.642 1.00 73.36 O
TER
ATOM 2 P G A1239 -95.517 137.984 55.993 1.00 70.18 P
ATOM 3 OP1 G A1239 -95.659 136.576 55.548 1.00 70.18 O
ATOM 4 OP2 G A1239 -96.063 139.064 55.140 1.00 70.18 O
ATOM 5 O5' G A1239 -96.067 138.142 57.476 1.00 70.18 O
ATOM 6 C5' G A1239 -95.677 137.245 58.504 1.00 70.18 C
ATOM 7 C4' G A1239 -96.492 137.472 59.743 1.00 70.18 C
ATOM 8 O4' G A1239 -96.412 138.874 60.117 1.00 70.18 O
ATOM 9 C3' G A1239 -97.981 137.196 59.597 1.00 70.18 C
ATOM 10 O3' G A1239 -98.308 135.833 59.806 1.00 70.18 O
ATOM 11 C2' G A1239 -98.606 138.137 60.612 1.00 70.18 C
ATOM 12 O2' G A1239 -98.525 137.593 61.920 1.00 70.18 O
ATOM 13 C1' G A1239 -97.676 139.346 60.516 1.00 70.18 C
ATOM 14 N9 G A1239 -98.136 140.328 59.510 1.00 70.13 N
ATOM 15 C8 G A1239 -97.654 140.438 58.227 1.00 70.13 C
ATOM 16 N7 G A1239 -98.214 141.388 57.533 1.00 70.13 N
ATOM 17 C5 G A1239 -99.130 141.958 58.408 1.00 70.13 C
ATOM 18 C6 G A1239 -100.035 143.047 58.208 1.00 70.13 C
ATOM 19 O6 G A1239 -100.207 143.734 57.184 1.00 70.13 O
ATOM 20 N1 G A1239 -100.783 143.302 59.364 1.00 70.13 N
ATOM 21 C2 G A1239 -100.673 142.602 60.540 1.00 70.13 C
ATOM 22 N2 G A1239 -101.473 143.002 61.527 1.00 70.13 N
ATOM 23 N3 G A1239 -99.839 141.594 60.743 1.00 70.13 N
ATOM 24 C4 G A1239 -99.094 141.320 59.642 1.00 70.13 C
ATOM 25 P G A1240 -99.628 135.205 59.140 1.00 69.54 P
ATOM 26 OP1 G A1240 -99.549 133.740 59.316 1.00 69.54 O
ATOM 27 OP2 G A1240 -99.723 135.757 57.760 1.00 69.54 O
ATOM 28 O5' G A1240 -100.795 135.792 60.055 1.00 69.54 O
TER
ATOM 1 O3' C B1235 -94.721 137.599 69.472 1.00 55.90 O
ATOM 2 P A B1236 -93.605 138.741 69.505 1.00 50.76 P
ATOM 3 OP1 A B1236 -92.304 138.070 69.679 1.00 50.76 O
ATOM 4 OP2 A B1236 -94.045 139.732 70.529 1.00 50.76 O
ATOM 5 O5' A B1236 -93.696 139.384 68.039 1.00 50.76 O
ATOM 6 C5' A B1236 -92.811 138.988 66.996 1.00 50.76 C
ATOM 7 C4' A B1236 -93.545 138.277 65.882 1.00 50.76 C
ATOM 8 O4' A B1236 -94.738 137.641 66.406 1.00 50.76 O
ATOM 9 C3' A B1236 -94.075 139.149 64.756 1.00 50.76 C
ATOM 10 O3' A B1236 -93.088 139.506 63.815 1.00 50.76 O
ATOM 11 C2' A B1236 -95.177 138.286 64.173 1.00 50.76 C
ATOM 12 O2' A B1236 -94.632 137.227 63.393 1.00 50.76 O
ATOM 13 C1' A B1236 -95.776 137.698 65.442 1.00 50.76 C
ATOM 14 N9 A B1236 -96.880 138.537 65.975 1.00 51.55 N
ATOM 15 C8 A B1236 -96.995 139.067 67.249 1.00 51.55 C
ATOM 16 N7 A B1236 -98.083 139.777 67.457 1.00 51.55 N
ATOM 17 C5 A B1236 -98.741 139.715 66.237 1.00 51.55 C
ATOM 18 C6 A B1236 -99.953 140.273 65.815 1.00 51.55 C
ATOM 19 N6 A B1236 -100.704 141.008 66.630 1.00 51.55 N
ATOM 20 N1 A B1236 -100.364 140.053 64.547 1.00 51.55 N
ATOM 21 C2 A B1236 -99.583 139.307 63.759 1.00 51.55 C
ATOM 22 N3 A B1236 -98.414 138.723 64.040 1.00 51.55 N
ATOM 23 C4 A B1236 -98.031 138.961 65.314 1.00 51.55 C
ATOM 24 P A B1237 -92.713 141.050 63.610 1.00 73.36 P
ATOM 25 OP1 A B1237 -91.402 141.097 62.903 1.00 73.36 O
ATOM 26 OP2 A B1237 -92.842 141.705 64.941 1.00 73.36 O
ATOM 27 O5' A B1237 -93.856 141.574 62.642 1.00 73.36 O
TER
Atoms:
OP1: (-95.659,136.576,55.548)
OP2: (-96.063,139.064,55.140)
C3': (-97.981,137.196,59.597)
C1': (-97.676,139.346,60.516)
C5': (-95.677,137.245,58.504)
O6: (-100.207,143.734,57.184)
O4': (-96.412,138.874,60.117)
C8: (-97.654,140.438,58.227)
C2: (-100.673,142.602,60.540)
C6: (-100.035,143.047,58.208)
C5: (-99.130,141.958,58.408)
C4: (-99.094,141.320,59.642)
P: (-95.517,137.984,55.993)
C4': (-96.492,137.472,59.743)
C2': (-98.606,138.137,60.612)
O2': (-98.525,137.593,61.920)
N1: (-100.783,143.302,59.364)
N2: (-101.473,143.002,61.527)
N3: (-99.839,141.594,60.743)
N7: (-98.214,141.388,57.533)
N9: (-98.136,140.328,59.510)
O5': (-96.067,138.142,57.476)
O3': (-98.308,135.833,59.806)
OP2: (-96.063,139.064,55.140)
C3': (-97.981,137.196,59.597)
C1': (-97.676,139.346,60.516)
C5': (-95.677,137.245,58.504)
O6: (-100.207,143.734,57.184)
O4': (-96.412,138.874,60.117)
C8: (-97.654,140.438,58.227)
C2: (-100.673,142.602,60.540)
C6: (-100.035,143.047,58.208)
C5: (-99.130,141.958,58.408)
C4: (-99.094,141.320,59.642)
P: (-95.517,137.984,55.993)
C4': (-96.492,137.472,59.743)
C2': (-98.606,138.137,60.612)
O2': (-98.525,137.593,61.920)
N1: (-100.783,143.302,59.364)
N2: (-101.473,143.002,61.527)
N3: (-99.839,141.594,60.743)
N7: (-98.214,141.388,57.533)
N9: (-98.136,140.328,59.510)
O5': (-96.067,138.142,57.476)
O3': (-98.308,135.833,59.806)
OP1: (-92.304,138.070,69.679)
OP2: (-94.045,139.732,70.529)
C3': (-94.075,139.149,64.756)
C1': (-95.776,137.698,65.442)
C5': (-92.811,138.988,66.996)
O4': (-94.738,137.641,66.406)
C8: (-96.995,139.067,67.249)
O2': (-94.632,137.227,63.393)
C6: (-99.953,140.273,65.815)
C5: (-98.741,139.715,66.237)
C4: (-98.031,138.961,65.314)
P: (-93.605,138.741,69.505)
C4': (-93.545,138.277,65.882)
C2': (-95.177,138.286,64.173)
C2: (-99.583,139.307,63.759)
N1: (-100.364,140.053,64.547)
N3: (-98.414,138.723,64.040)
N6: (-100.704,141.008,66.630)
N7: (-98.083,139.777,67.457)
N9: (-96.880,138.537,65.975)
O5': (-93.696,139.384,68.039)
O3': (-93.088,139.506,63.815)
OP2: (-94.045,139.732,70.529)
C3': (-94.075,139.149,64.756)
C1': (-95.776,137.698,65.442)
C5': (-92.811,138.988,66.996)
O4': (-94.738,137.641,66.406)
C8: (-96.995,139.067,67.249)
O2': (-94.632,137.227,63.393)
C6: (-99.953,140.273,65.815)
C5: (-98.741,139.715,66.237)
C4: (-98.031,138.961,65.314)
P: (-93.605,138.741,69.505)
C4': (-93.545,138.277,65.882)
C2': (-95.177,138.286,64.173)
C2: (-99.583,139.307,63.759)
N1: (-100.364,140.053,64.547)
N3: (-98.414,138.723,64.040)
N6: (-100.704,141.008,66.630)
N7: (-98.083,139.777,67.457)
N9: (-96.880,138.537,65.975)
O5': (-93.696,139.384,68.039)
O3': (-93.088,139.506,63.815)
Image (generated by PyMOL):