Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1G:A520:A488
Extra
PDB:
ATOM 1 O3' G A 519 -114.102 36.373 -63.829 1.00 90.29 O
ATOM 2 P G A 520 -112.627 36.409 -64.458 1.00 90.46 P
ATOM 3 OP1 G A 520 -112.563 37.628 -65.303 1.00 93.05 O
ATOM 4 OP2 G A 520 -112.320 35.092 -65.062 1.00 82.46 O
ATOM 5 O5' G A 520 -111.674 36.578 -63.181 1.00 78.33 O
ATOM 6 C5' G A 520 -111.652 37.814 -62.508 1.00 83.36 C
ATOM 7 C4' G A 520 -110.671 37.795 -61.356 1.00 78.25 C
ATOM 8 O4' G A 520 -111.051 36.751 -60.425 1.00 82.12 O
ATOM 9 C3' G A 520 -109.222 37.508 -61.719 1.00 69.62 C
ATOM 10 O3' G A 520 -108.552 38.715 -62.102 1.00 64.14 O
ATOM 11 C2' G A 520 -108.734 37.052 -60.358 1.00 79.72 C
ATOM 12 O2' G A 520 -108.630 38.169 -59.505 1.00 79.49 O
ATOM 13 C1' G A 520 -109.883 36.167 -59.883 1.00 85.72 C
ATOM 14 N9 G A 520 -109.836 34.785 -60.354 1.00 78.23 N
ATOM 15 C8 G A 520 -110.724 34.207 -61.226 1.00 81.55 C
ATOM 16 N7 G A 520 -110.464 32.957 -61.488 1.00 82.54 N
ATOM 17 C5 G A 520 -109.329 32.683 -60.745 1.00 76.21 C
ATOM 18 C6 G A 520 -108.593 31.486 -60.643 1.00 74.32 C
ATOM 19 O6 G A 520 -108.820 30.411 -61.211 1.00 79.59 O
ATOM 20 N1 G A 520 -107.505 31.619 -59.786 1.00 79.90 N
ATOM 21 C2 G A 520 -107.182 32.776 -59.117 1.00 83.25 C
ATOM 22 N2 G A 520 -106.099 32.729 -58.331 1.00 73.06 N
ATOM 23 N3 G A 520 -107.867 33.908 -59.207 1.00 87.85 N
ATOM 24 C4 G A 520 -108.928 33.793 -60.037 1.00 80.54 C
ATOM 25 P C A 521 -107.233 38.690 -63.024 1.00 85.02 P
ATOM 26 OP1 C A 521 -106.881 40.075 -63.438 1.00 78.07 O
ATOM 27 OP2 C A 521 -107.426 37.641 -64.054 1.00 80.48 O
ATOM 28 O5' C A 521 -106.120 38.184 -62.000 1.00 88.69 O
TER
ATOM 1 O3' A B 487 -103.318 40.198 -53.558 1.00 74.40 O
ATOM 2 P A B 488 -104.602 40.954 -54.140 1.00 80.55 P
ATOM 3 OP1 A B 488 -104.189 41.865 -55.229 1.00 86.73 O
ATOM 4 OP2 A B 488 -105.371 41.450 -52.979 1.00 73.35 O
ATOM 5 O5' A B 488 -105.443 39.793 -54.815 1.00 86.56 O
ATOM 6 C5' A B 488 -106.330 40.126 -55.862 1.00 78.01 C
ATOM 7 C4' A B 488 -106.942 38.855 -56.421 1.00 88.78 C
ATOM 8 O4' A B 488 -105.892 37.901 -56.715 1.00 96.42 O
ATOM 9 C3' A B 488 -107.898 38.141 -55.477 1.00 80.88 C
ATOM 10 O3' A B 488 -109.192 38.593 -55.759 1.00 73.91 O
ATOM 11 C2' A B 488 -107.735 36.673 -55.834 1.00 86.67 C
ATOM 12 O2' A B 488 -108.608 36.291 -56.876 1.00 82.67 O
ATOM 13 C1' A B 488 -106.273 36.616 -56.278 1.00 91.74 C
ATOM 14 N9 A B 488 -105.351 36.228 -55.216 1.00 91.16 N
ATOM 15 C8 A B 488 -105.017 36.907 -54.073 1.00 84.34 C
ATOM 16 N7 A B 488 -104.147 36.277 -53.318 1.00 84.69 N
ATOM 17 C5 A B 488 -103.895 35.104 -54.017 1.00 93.33 C
ATOM 18 C6 A B 488 -103.067 33.989 -53.768 1.00 87.59 C
ATOM 19 N6 A B 488 -102.293 33.853 -52.692 1.00 93.68 N
ATOM 20 N1 A B 488 -103.058 33.000 -54.677 1.00 86.54 N
ATOM 21 C2 A B 488 -103.828 33.110 -55.766 1.00 96.60 C
ATOM 22 N3 A B 488 -104.650 34.096 -56.114 1.00 93.56 N
ATOM 23 C4 A B 488 -104.629 35.066 -55.187 1.00 93.00 C
ATOM 24 P C B 489 -109.749 39.816 -54.898 1.00103.12 P
ATOM 25 OP1 C B 489 -110.620 40.657 -55.752 1.00117.43 O
ATOM 26 OP2 C B 489 -108.628 40.444 -54.164 1.00 98.87 O
ATOM 27 O5' C B 489 -110.626 38.984 -53.851 1.00 92.58 O
TER
ATOM 2 P G A 520 -112.627 36.409 -64.458 1.00 90.46 P
ATOM 3 OP1 G A 520 -112.563 37.628 -65.303 1.00 93.05 O
ATOM 4 OP2 G A 520 -112.320 35.092 -65.062 1.00 82.46 O
ATOM 5 O5' G A 520 -111.674 36.578 -63.181 1.00 78.33 O
ATOM 6 C5' G A 520 -111.652 37.814 -62.508 1.00 83.36 C
ATOM 7 C4' G A 520 -110.671 37.795 -61.356 1.00 78.25 C
ATOM 8 O4' G A 520 -111.051 36.751 -60.425 1.00 82.12 O
ATOM 9 C3' G A 520 -109.222 37.508 -61.719 1.00 69.62 C
ATOM 10 O3' G A 520 -108.552 38.715 -62.102 1.00 64.14 O
ATOM 11 C2' G A 520 -108.734 37.052 -60.358 1.00 79.72 C
ATOM 12 O2' G A 520 -108.630 38.169 -59.505 1.00 79.49 O
ATOM 13 C1' G A 520 -109.883 36.167 -59.883 1.00 85.72 C
ATOM 14 N9 G A 520 -109.836 34.785 -60.354 1.00 78.23 N
ATOM 15 C8 G A 520 -110.724 34.207 -61.226 1.00 81.55 C
ATOM 16 N7 G A 520 -110.464 32.957 -61.488 1.00 82.54 N
ATOM 17 C5 G A 520 -109.329 32.683 -60.745 1.00 76.21 C
ATOM 18 C6 G A 520 -108.593 31.486 -60.643 1.00 74.32 C
ATOM 19 O6 G A 520 -108.820 30.411 -61.211 1.00 79.59 O
ATOM 20 N1 G A 520 -107.505 31.619 -59.786 1.00 79.90 N
ATOM 21 C2 G A 520 -107.182 32.776 -59.117 1.00 83.25 C
ATOM 22 N2 G A 520 -106.099 32.729 -58.331 1.00 73.06 N
ATOM 23 N3 G A 520 -107.867 33.908 -59.207 1.00 87.85 N
ATOM 24 C4 G A 520 -108.928 33.793 -60.037 1.00 80.54 C
ATOM 25 P C A 521 -107.233 38.690 -63.024 1.00 85.02 P
ATOM 26 OP1 C A 521 -106.881 40.075 -63.438 1.00 78.07 O
ATOM 27 OP2 C A 521 -107.426 37.641 -64.054 1.00 80.48 O
ATOM 28 O5' C A 521 -106.120 38.184 -62.000 1.00 88.69 O
TER
ATOM 1 O3' A B 487 -103.318 40.198 -53.558 1.00 74.40 O
ATOM 2 P A B 488 -104.602 40.954 -54.140 1.00 80.55 P
ATOM 3 OP1 A B 488 -104.189 41.865 -55.229 1.00 86.73 O
ATOM 4 OP2 A B 488 -105.371 41.450 -52.979 1.00 73.35 O
ATOM 5 O5' A B 488 -105.443 39.793 -54.815 1.00 86.56 O
ATOM 6 C5' A B 488 -106.330 40.126 -55.862 1.00 78.01 C
ATOM 7 C4' A B 488 -106.942 38.855 -56.421 1.00 88.78 C
ATOM 8 O4' A B 488 -105.892 37.901 -56.715 1.00 96.42 O
ATOM 9 C3' A B 488 -107.898 38.141 -55.477 1.00 80.88 C
ATOM 10 O3' A B 488 -109.192 38.593 -55.759 1.00 73.91 O
ATOM 11 C2' A B 488 -107.735 36.673 -55.834 1.00 86.67 C
ATOM 12 O2' A B 488 -108.608 36.291 -56.876 1.00 82.67 O
ATOM 13 C1' A B 488 -106.273 36.616 -56.278 1.00 91.74 C
ATOM 14 N9 A B 488 -105.351 36.228 -55.216 1.00 91.16 N
ATOM 15 C8 A B 488 -105.017 36.907 -54.073 1.00 84.34 C
ATOM 16 N7 A B 488 -104.147 36.277 -53.318 1.00 84.69 N
ATOM 17 C5 A B 488 -103.895 35.104 -54.017 1.00 93.33 C
ATOM 18 C6 A B 488 -103.067 33.989 -53.768 1.00 87.59 C
ATOM 19 N6 A B 488 -102.293 33.853 -52.692 1.00 93.68 N
ATOM 20 N1 A B 488 -103.058 33.000 -54.677 1.00 86.54 N
ATOM 21 C2 A B 488 -103.828 33.110 -55.766 1.00 96.60 C
ATOM 22 N3 A B 488 -104.650 34.096 -56.114 1.00 93.56 N
ATOM 23 C4 A B 488 -104.629 35.066 -55.187 1.00 93.00 C
ATOM 24 P C B 489 -109.749 39.816 -54.898 1.00103.12 P
ATOM 25 OP1 C B 489 -110.620 40.657 -55.752 1.00117.43 O
ATOM 26 OP2 C B 489 -108.628 40.444 -54.164 1.00 98.87 O
ATOM 27 O5' C B 489 -110.626 38.984 -53.851 1.00 92.58 O
TER
Atoms:
OP1: (-112.563,37.628,-65.303)
OP2: (-112.320,35.092,-65.062)
C3': (-109.222,37.508,-61.719)
C1': (-109.883,36.167,-59.883)
C5': (-111.652,37.814,-62.508)
O6: (-108.820,30.411,-61.211)
O4': (-111.051,36.751,-60.425)
C8: (-110.724,34.207,-61.226)
C2: (-107.182,32.776,-59.117)
C6: (-108.593,31.486,-60.643)
C5: (-109.329,32.683,-60.745)
C4: (-108.928,33.793,-60.037)
P: (-112.627,36.409,-64.458)
C4': (-110.671,37.795,-61.356)
C2': (-108.734,37.052,-60.358)
O2': (-108.630,38.169,-59.505)
N1: (-107.505,31.619,-59.786)
N2: (-106.099,32.729,-58.331)
N3: (-107.867,33.908,-59.207)
N7: (-110.464,32.957,-61.488)
N9: (-109.836,34.785,-60.354)
O5': (-111.674,36.578,-63.181)
O3': (-108.552,38.715,-62.102)
OP2: (-112.320,35.092,-65.062)
C3': (-109.222,37.508,-61.719)
C1': (-109.883,36.167,-59.883)
C5': (-111.652,37.814,-62.508)
O6: (-108.820,30.411,-61.211)
O4': (-111.051,36.751,-60.425)
C8: (-110.724,34.207,-61.226)
C2: (-107.182,32.776,-59.117)
C6: (-108.593,31.486,-60.643)
C5: (-109.329,32.683,-60.745)
C4: (-108.928,33.793,-60.037)
P: (-112.627,36.409,-64.458)
C4': (-110.671,37.795,-61.356)
C2': (-108.734,37.052,-60.358)
O2': (-108.630,38.169,-59.505)
N1: (-107.505,31.619,-59.786)
N2: (-106.099,32.729,-58.331)
N3: (-107.867,33.908,-59.207)
N7: (-110.464,32.957,-61.488)
N9: (-109.836,34.785,-60.354)
O5': (-111.674,36.578,-63.181)
O3': (-108.552,38.715,-62.102)
OP1: (-104.189,41.865,-55.229)
OP2: (-105.371,41.450,-52.979)
C3': (-107.898,38.141,-55.477)
C1': (-106.273,36.616,-56.278)
C5': (-106.330,40.126,-55.862)
O4': (-105.892,37.901,-56.715)
C8: (-105.017,36.907,-54.073)
O2': (-108.608,36.291,-56.876)
C6: (-103.067,33.989,-53.768)
C5: (-103.895,35.104,-54.017)
C4: (-104.629,35.066,-55.187)
P: (-104.602,40.954,-54.140)
C4': (-106.942,38.855,-56.421)
C2': (-107.735,36.673,-55.834)
C2: (-103.828,33.110,-55.766)
N1: (-103.058,33.000,-54.677)
N3: (-104.650,34.096,-56.114)
N6: (-102.293,33.853,-52.692)
N7: (-104.147,36.277,-53.318)
N9: (-105.351,36.228,-55.216)
O5': (-105.443,39.793,-54.815)
O3': (-109.192,38.593,-55.759)
OP2: (-105.371,41.450,-52.979)
C3': (-107.898,38.141,-55.477)
C1': (-106.273,36.616,-56.278)
C5': (-106.330,40.126,-55.862)
O4': (-105.892,37.901,-56.715)
C8: (-105.017,36.907,-54.073)
O2': (-108.608,36.291,-56.876)
C6: (-103.067,33.989,-53.768)
C5: (-103.895,35.104,-54.017)
C4: (-104.629,35.066,-55.187)
P: (-104.602,40.954,-54.140)
C4': (-106.942,38.855,-56.421)
C2': (-107.735,36.673,-55.834)
C2: (-103.828,33.110,-55.766)
N1: (-103.058,33.000,-54.677)
N3: (-104.650,34.096,-56.114)
N6: (-102.293,33.853,-52.692)
N7: (-104.147,36.277,-53.318)
N9: (-105.351,36.228,-55.216)
O5': (-105.443,39.793,-54.815)
O3': (-109.192,38.593,-55.759)
Image (generated by PyMOL):