Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A79:A32
Extra
PDB:
ATOM 1 O3' G A 78 6.724 -40.377 3.607 1.00 61.74 O
ATOM 2 P G A 79 5.689 -39.203 3.280 1.00 61.90 P
ATOM 3 OP1 G A 79 4.753 -39.709 2.248 1.00 62.67 O
ATOM 4 OP2 G A 79 6.458 -37.956 3.062 1.00 61.52 O
ATOM 5 O5' G A 79 4.890 -39.018 4.653 1.00 61.52 O
ATOM 6 C5' G A 79 4.030 -40.040 5.148 1.00 61.72 C
ATOM 7 C4' G A 79 3.644 -39.750 6.587 1.00 61.20 C
ATOM 8 O4' G A 79 4.827 -39.743 7.429 1.00 60.74 O
ATOM 9 C3' G A 79 3.021 -38.383 6.827 1.00 61.06 C
ATOM 10 O3' G A 79 1.641 -38.380 6.477 1.00 61.49 O
ATOM 11 C2' G A 79 3.271 -38.228 8.323 1.00 60.23 C
ATOM 12 O2' G A 79 2.427 -39.040 9.115 1.00 59.73 O
ATOM 13 C1' G A 79 4.705 -38.735 8.416 1.00 60.35 C
ATOM 14 N9 G A 79 5.705 -37.697 8.170 1.00 60.93 N
ATOM 15 C8 G A 79 6.294 -37.390 6.966 1.00 62.08 C
ATOM 16 N7 G A 79 7.154 -36.414 7.030 1.00 62.38 N
ATOM 17 C5 G A 79 7.138 -36.044 8.365 1.00 61.50 C
ATOM 18 C6 G A 79 7.876 -35.033 9.025 1.00 61.48 C
ATOM 19 O6 G A 79 8.704 -34.259 8.525 1.00 62.28 O
ATOM 20 N1 G A 79 7.577 -34.971 10.388 1.00 60.82 N
ATOM 21 C2 G A 79 6.673 -35.796 11.024 1.00 60.12 C
ATOM 22 N2 G A 79 6.517 -35.595 12.339 1.00 59.59 N
ATOM 23 N3 G A 79 5.974 -36.751 10.415 1.00 60.14 N
ATOM 24 C4 G A 79 6.252 -36.821 9.086 1.00 60.85 C
ATOM 25 P A A 80 1.138 -37.576 5.184 1.00 62.07 P
ATOM 26 OP1 A A 80 1.415 -38.401 3.987 1.00 63.09 O
ATOM 27 OP2 A A 80 1.667 -36.194 5.251 1.00 61.91 O
ATOM 28 O5' A A 80 -0.442 -37.517 5.420 1.00 61.52 O
TER
ATOM 1 O3' G B 31 -1.554 -42.188 15.521 1.00 53.78 O
ATOM 2 P A B 32 -2.948 -41.415 15.425 1.00 54.25 P
ATOM 3 OP1 A B 32 -2.839 -40.228 16.304 1.00 54.07 O
ATOM 4 OP2 A B 32 -4.036 -42.403 15.625 1.00 54.07 O
ATOM 5 O5' A B 32 -2.992 -40.883 13.914 1.00 54.96 O
ATOM 6 C5' A B 32 -3.147 -41.788 12.826 1.00 56.21 C
ATOM 7 C4' A B 32 -2.097 -41.535 11.756 1.00 57.38 C
ATOM 8 O4' A B 32 -1.676 -40.148 11.771 1.00 57.53 O
ATOM 9 C3' A B 32 -0.806 -42.337 11.869 1.00 58.08 C
ATOM 10 O3' A B 32 -0.297 -42.532 10.567 1.00 59.71 O
ATOM 11 C2' A B 32 0.111 -41.390 12.634 1.00 57.67 C
ATOM 12 O2' A B 32 1.483 -41.673 12.424 1.00 57.78 O
ATOM 13 C1' A B 32 -0.281 -40.064 11.987 1.00 57.54 C
ATOM 14 N9 A B 32 -0.031 -38.869 12.790 1.00 57.21 N
ATOM 15 C8 A B 32 -0.721 -38.468 13.902 1.00 56.78 C
ATOM 16 N7 A B 32 -0.286 -37.345 14.421 1.00 56.60 N
ATOM 17 C5 A B 32 0.761 -36.982 13.591 1.00 56.90 C
ATOM 18 C6 A B 32 1.642 -35.880 13.600 1.00 56.78 C
ATOM 19 N6 A B 32 1.587 -34.913 14.519 1.00 57.08 N
ATOM 20 N1 A B 32 2.580 -35.808 12.629 1.00 56.61 N
ATOM 21 C2 A B 32 2.629 -36.780 11.709 1.00 56.87 C
ATOM 22 N3 A B 32 1.856 -37.863 11.597 1.00 57.16 N
ATOM 23 C4 A B 32 0.932 -37.908 12.576 1.00 57.17 C
ATOM 24 P A B 33 -0.594 -43.850 9.716 1.00 61.32 P
ATOM 25 OP1 A B 33 -2.054 -43.933 9.476 1.00 60.93 O
ATOM 26 OP2 A B 33 0.138 -44.976 10.341 1.00 61.74 O
ATOM 27 O5' A B 33 0.169 -43.532 8.345 1.00 62.48 O
TER
ATOM 2 P G A 79 5.689 -39.203 3.280 1.00 61.90 P
ATOM 3 OP1 G A 79 4.753 -39.709 2.248 1.00 62.67 O
ATOM 4 OP2 G A 79 6.458 -37.956 3.062 1.00 61.52 O
ATOM 5 O5' G A 79 4.890 -39.018 4.653 1.00 61.52 O
ATOM 6 C5' G A 79 4.030 -40.040 5.148 1.00 61.72 C
ATOM 7 C4' G A 79 3.644 -39.750 6.587 1.00 61.20 C
ATOM 8 O4' G A 79 4.827 -39.743 7.429 1.00 60.74 O
ATOM 9 C3' G A 79 3.021 -38.383 6.827 1.00 61.06 C
ATOM 10 O3' G A 79 1.641 -38.380 6.477 1.00 61.49 O
ATOM 11 C2' G A 79 3.271 -38.228 8.323 1.00 60.23 C
ATOM 12 O2' G A 79 2.427 -39.040 9.115 1.00 59.73 O
ATOM 13 C1' G A 79 4.705 -38.735 8.416 1.00 60.35 C
ATOM 14 N9 G A 79 5.705 -37.697 8.170 1.00 60.93 N
ATOM 15 C8 G A 79 6.294 -37.390 6.966 1.00 62.08 C
ATOM 16 N7 G A 79 7.154 -36.414 7.030 1.00 62.38 N
ATOM 17 C5 G A 79 7.138 -36.044 8.365 1.00 61.50 C
ATOM 18 C6 G A 79 7.876 -35.033 9.025 1.00 61.48 C
ATOM 19 O6 G A 79 8.704 -34.259 8.525 1.00 62.28 O
ATOM 20 N1 G A 79 7.577 -34.971 10.388 1.00 60.82 N
ATOM 21 C2 G A 79 6.673 -35.796 11.024 1.00 60.12 C
ATOM 22 N2 G A 79 6.517 -35.595 12.339 1.00 59.59 N
ATOM 23 N3 G A 79 5.974 -36.751 10.415 1.00 60.14 N
ATOM 24 C4 G A 79 6.252 -36.821 9.086 1.00 60.85 C
ATOM 25 P A A 80 1.138 -37.576 5.184 1.00 62.07 P
ATOM 26 OP1 A A 80 1.415 -38.401 3.987 1.00 63.09 O
ATOM 27 OP2 A A 80 1.667 -36.194 5.251 1.00 61.91 O
ATOM 28 O5' A A 80 -0.442 -37.517 5.420 1.00 61.52 O
TER
ATOM 1 O3' G B 31 -1.554 -42.188 15.521 1.00 53.78 O
ATOM 2 P A B 32 -2.948 -41.415 15.425 1.00 54.25 P
ATOM 3 OP1 A B 32 -2.839 -40.228 16.304 1.00 54.07 O
ATOM 4 OP2 A B 32 -4.036 -42.403 15.625 1.00 54.07 O
ATOM 5 O5' A B 32 -2.992 -40.883 13.914 1.00 54.96 O
ATOM 6 C5' A B 32 -3.147 -41.788 12.826 1.00 56.21 C
ATOM 7 C4' A B 32 -2.097 -41.535 11.756 1.00 57.38 C
ATOM 8 O4' A B 32 -1.676 -40.148 11.771 1.00 57.53 O
ATOM 9 C3' A B 32 -0.806 -42.337 11.869 1.00 58.08 C
ATOM 10 O3' A B 32 -0.297 -42.532 10.567 1.00 59.71 O
ATOM 11 C2' A B 32 0.111 -41.390 12.634 1.00 57.67 C
ATOM 12 O2' A B 32 1.483 -41.673 12.424 1.00 57.78 O
ATOM 13 C1' A B 32 -0.281 -40.064 11.987 1.00 57.54 C
ATOM 14 N9 A B 32 -0.031 -38.869 12.790 1.00 57.21 N
ATOM 15 C8 A B 32 -0.721 -38.468 13.902 1.00 56.78 C
ATOM 16 N7 A B 32 -0.286 -37.345 14.421 1.00 56.60 N
ATOM 17 C5 A B 32 0.761 -36.982 13.591 1.00 56.90 C
ATOM 18 C6 A B 32 1.642 -35.880 13.600 1.00 56.78 C
ATOM 19 N6 A B 32 1.587 -34.913 14.519 1.00 57.08 N
ATOM 20 N1 A B 32 2.580 -35.808 12.629 1.00 56.61 N
ATOM 21 C2 A B 32 2.629 -36.780 11.709 1.00 56.87 C
ATOM 22 N3 A B 32 1.856 -37.863 11.597 1.00 57.16 N
ATOM 23 C4 A B 32 0.932 -37.908 12.576 1.00 57.17 C
ATOM 24 P A B 33 -0.594 -43.850 9.716 1.00 61.32 P
ATOM 25 OP1 A B 33 -2.054 -43.933 9.476 1.00 60.93 O
ATOM 26 OP2 A B 33 0.138 -44.976 10.341 1.00 61.74 O
ATOM 27 O5' A B 33 0.169 -43.532 8.345 1.00 62.48 O
TER
Atoms:
OP1: (4.753,-39.709,2.248)
OP2: (6.458,-37.956,3.062)
C3': (3.021,-38.383,6.827)
C1': (4.705,-38.735,8.416)
C5': (4.030,-40.040,5.148)
O6: (8.704,-34.259,8.525)
O4': (4.827,-39.743,7.429)
C8: (6.294,-37.390,6.966)
C2: (6.673,-35.796,11.024)
C6: (7.876,-35.033,9.025)
C5: (7.138,-36.044,8.365)
C4: (6.252,-36.821,9.086)
P: (5.689,-39.203,3.280)
C4': (3.644,-39.750,6.587)
C2': (3.271,-38.228,8.323)
O2': (2.427,-39.040,9.115)
N1: (7.577,-34.971,10.388)
N2: (6.517,-35.595,12.339)
N3: (5.974,-36.751,10.415)
N7: (7.154,-36.414,7.030)
N9: (5.705,-37.697,8.170)
O5': (4.890,-39.018,4.653)
O3': (1.641,-38.380,6.477)
OP2: (6.458,-37.956,3.062)
C3': (3.021,-38.383,6.827)
C1': (4.705,-38.735,8.416)
C5': (4.030,-40.040,5.148)
O6: (8.704,-34.259,8.525)
O4': (4.827,-39.743,7.429)
C8: (6.294,-37.390,6.966)
C2: (6.673,-35.796,11.024)
C6: (7.876,-35.033,9.025)
C5: (7.138,-36.044,8.365)
C4: (6.252,-36.821,9.086)
P: (5.689,-39.203,3.280)
C4': (3.644,-39.750,6.587)
C2': (3.271,-38.228,8.323)
O2': (2.427,-39.040,9.115)
N1: (7.577,-34.971,10.388)
N2: (6.517,-35.595,12.339)
N3: (5.974,-36.751,10.415)
N7: (7.154,-36.414,7.030)
N9: (5.705,-37.697,8.170)
O5': (4.890,-39.018,4.653)
O3': (1.641,-38.380,6.477)
OP1: (-2.839,-40.228,16.304)
OP2: (-4.036,-42.403,15.625)
C3': (-0.806,-42.337,11.869)
C1': (-0.281,-40.064,11.987)
C5': (-3.147,-41.788,12.826)
O4': (-1.676,-40.148,11.771)
C8: (-0.721,-38.468,13.902)
O2': (1.483,-41.673,12.424)
C6: (1.642,-35.880,13.600)
C5: (0.761,-36.982,13.591)
C4: (0.932,-37.908,12.576)
P: (-2.948,-41.415,15.425)
C4': (-2.097,-41.535,11.756)
C2': (0.111,-41.390,12.634)
C2: (2.629,-36.780,11.709)
N1: (2.580,-35.808,12.629)
N3: (1.856,-37.863,11.597)
N6: (1.587,-34.913,14.519)
N7: (-0.286,-37.345,14.421)
N9: (-0.031,-38.869,12.790)
O5': (-2.992,-40.883,13.914)
O3': (-0.297,-42.532,10.567)
OP2: (-4.036,-42.403,15.625)
C3': (-0.806,-42.337,11.869)
C1': (-0.281,-40.064,11.987)
C5': (-3.147,-41.788,12.826)
O4': (-1.676,-40.148,11.771)
C8: (-0.721,-38.468,13.902)
O2': (1.483,-41.673,12.424)
C6: (1.642,-35.880,13.600)
C5: (0.761,-36.982,13.591)
C4: (0.932,-37.908,12.576)
P: (-2.948,-41.415,15.425)
C4': (-2.097,-41.535,11.756)
C2': (0.111,-41.390,12.634)
C2: (2.629,-36.780,11.709)
N1: (2.580,-35.808,12.629)
N3: (1.856,-37.863,11.597)
N6: (1.587,-34.913,14.519)
N7: (-0.286,-37.345,14.421)
N9: (-0.031,-38.869,12.790)
O5': (-2.992,-40.883,13.914)
O3': (-0.297,-42.532,10.567)
Image (generated by PyMOL):