ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:02048:02378

Extra

PDB:
ATOM 1 O3' A A2047 60.782 121.403 85.120 1.00 52.84 O
ATOM 2 P G A2048 61.925 122.085 86.021 1.00 53.41 P
ATOM 3 OP1 G A2048 61.300 123.186 86.818 1.00 54.56 O
ATOM 4 OP2 G A2048 63.097 122.381 85.153 1.00 55.33 O
ATOM 5 O5' G A2048 62.318 120.902 87.007 1.00 53.50 O
ATOM 6 C5' G A2048 62.618 121.141 88.379 1.00 49.46 C
ATOM 7 C4' G A2048 64.089 120.959 88.602 1.00 49.66 C
ATOM 8 O4' G A2048 64.324 120.906 90.037 1.00 49.85 O
ATOM 9 C3' G A2048 64.667 119.667 88.022 1.00 48.73 C
ATOM 10 O3' G A2048 66.006 119.896 87.598 1.00 50.16 O
ATOM 11 C2' G A2048 64.630 118.723 89.220 1.00 47.73 C
ATOM 12 O2' G A2048 65.575 117.674 89.159 1.00 45.89 O
ATOM 13 C1' G A2048 64.948 119.683 90.364 1.00 47.27 C
ATOM 14 N9 G A2048 64.461 119.235 91.664 1.00 46.00 N
ATOM 15 C8 G A2048 63.171 118.917 92.026 1.00 45.13 C
ATOM 16 N7 G A2048 63.084 118.458 93.247 1.00 45.08 N
ATOM 17 C5 G A2048 64.390 118.497 93.724 1.00 44.49 C
ATOM 18 C6 G A2048 64.928 118.100 94.977 1.00 44.85 C
ATOM 19 O6 G A2048 64.338 117.617 95.947 1.00 45.76 O
ATOM 20 N1 G A2048 66.307 118.306 95.034 1.00 44.92 N
ATOM 21 C2 G A2048 67.068 118.829 94.016 1.00 44.15 C
ATOM 22 N2 G A2048 68.380 118.950 94.249 1.00 44.78 N
ATOM 23 N3 G A2048 66.579 119.202 92.850 1.00 43.98 N
ATOM 24 C4 G A2048 65.244 119.002 92.770 1.00 45.20 C
ATOM 25 P A A2049 66.438 119.568 86.081 1.00 53.03 P
ATOM 26 OP1 A A2049 65.750 120.508 85.162 1.00 56.28 O
ATOM 27 OP2 A A2049 66.354 118.098 85.849 1.00 52.23 O
ATOM 28 O5' A A2049 67.979 119.908 86.071 1.00 53.93 O
TER

ATOM 1 O3' C B2377 60.414 117.820 90.208 1.00 44.97 O
ATOM 2 P G B2378 59.709 118.178 88.805 1.00 46.10 P
ATOM 3 OP1 G B2378 58.652 117.166 88.550 1.00 44.82 O
ATOM 4 OP2 G B2378 60.769 118.406 87.786 1.00 45.02 O
ATOM 5 O5' G B2378 58.972 119.560 89.093 1.00 45.62 O
ATOM 6 C5' G B2378 59.256 120.737 88.311 1.00 47.47 C
ATOM 7 C4' G B2378 57.970 121.345 87.810 1.00 49.36 C
ATOM 8 O4' G B2378 57.409 120.523 86.771 1.00 48.89 O
ATOM 9 C3' G B2378 56.852 121.398 88.839 1.00 51.27 C
ATOM 10 O3' G B2378 57.036 122.580 89.615 1.00 57.28 O
ATOM 11 C2' G B2378 55.575 121.455 87.983 1.00 49.79 C
ATOM 12 O2' G B2378 55.085 122.756 87.737 1.00 47.79 O
ATOM 13 C1' G B2378 56.044 120.851 86.653 1.00 49.46 C
ATOM 14 N9 G B2378 55.320 119.699 86.137 1.00 48.51 N
ATOM 15 C8 G B2378 55.357 118.407 86.598 1.00 48.23 C
ATOM 16 N7 G B2378 54.625 117.590 85.887 1.00 50.87 N
ATOM 17 C5 G B2378 54.061 118.399 84.904 1.00 51.51 C
ATOM 18 C6 G B2378 53.173 118.079 83.836 1.00 52.34 C
ATOM 19 O6 G B2378 52.681 116.985 83.546 1.00 53.31 O
ATOM 20 N1 G B2378 52.862 119.202 83.070 1.00 51.91 N
ATOM 21 C2 G B2378 53.329 120.470 83.303 1.00 50.92 C
ATOM 22 N2 G B2378 52.910 121.421 82.454 1.00 48.39 N
ATOM 23 N3 G B2378 54.149 120.783 84.298 1.00 50.91 N
ATOM 24 C4 G B2378 54.474 119.704 85.051 1.00 49.96 C
ATOM 25 P A B2379 56.696 122.583 91.183 1.00 60.23 P
ATOM 26 OP1 A B2379 55.300 122.092 91.336 1.00 62.23 O
ATOM 27 OP2 A B2379 57.061 123.934 91.702 1.00 60.28 O
ATOM 28 O5' A B2379 57.662 121.480 91.815 1.00 61.46 O
TER

Atoms:
OP1: (61.300,123.186,86.818)
OP2: (63.097,122.381,85.153)
C3': (64.667,119.667,88.022)
C1': (64.948,119.683,90.364)
C5': (62.618,121.141,88.379)
O6: (64.338,117.617,95.947)
O4': (64.324,120.906,90.037)
C8: (63.171,118.917,92.026)
C2: (67.068,118.829,94.016)
C6: (64.928,118.100,94.977)
C5: (64.390,118.497,93.724)
C4: (65.244,119.002,92.770)
P: (61.925,122.085,86.021)
C4': (64.089,120.959,88.602)
C2': (64.630,118.723,89.220)
O2': (65.575,117.674,89.159)
N1: (66.307,118.306,95.034)
N2: (68.380,118.950,94.249)
N3: (66.579,119.202,92.850)
N7: (63.084,118.458,93.247)
N9: (64.461,119.235,91.664)
O5': (62.318,120.902,87.007)
O3': (66.006,119.896,87.598)
OP1: (58.652,117.166,88.550)
OP2: (60.769,118.406,87.786)
C3': (56.852,121.398,88.839)
C1': (56.044,120.851,86.653)
C5': (59.256,120.737,88.311)
O6: (52.681,116.985,83.546)
O4': (57.409,120.523,86.771)
C8: (55.357,118.407,86.598)
C2: (53.329,120.470,83.303)
C6: (53.173,118.079,83.836)
C5: (54.061,118.399,84.904)
C4: (54.474,119.704,85.051)
P: (59.709,118.178,88.805)
C4': (57.970,121.345,87.810)
C2': (55.575,121.455,87.983)
O2': (55.085,122.756,87.737)
N1: (52.862,119.202,83.070)
N2: (52.910,121.421,82.454)
N3: (54.149,120.783,84.298)
N7: (54.625,117.590,85.887)
N9: (55.320,119.699,86.137)
O5': (58.972,119.560,89.093)
O3': (57.036,122.580,89.615)
Image (generated by PyMOL):
PyMOL image
show in jmol