ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01916:01905

Extra

PDB:
ATOM 1 O3' A A1915 119.580 102.263 95.404 1.00 61.54 O
ATOM 2 P G A1916 119.652 101.625 96.879 1.00 62.79 P
ATOM 3 OP1 G A1916 120.977 101.988 97.443 1.00 61.96 O
ATOM 4 OP2 G A1916 119.254 100.198 96.809 1.00 63.08 O
ATOM 5 O5' G A1916 118.530 102.406 97.694 1.00 61.40 O
ATOM 6 C5' G A1916 118.583 103.835 97.855 1.00 60.30 C
ATOM 7 C4' G A1916 117.403 104.301 98.668 1.00 60.23 C
ATOM 8 O4' G A1916 116.180 104.036 97.918 1.00 60.52 O
ATOM 9 C3' G A1916 117.246 103.573 100.006 1.00 60.52 C
ATOM 10 O3' G A1916 116.664 104.410 101.001 1.00 61.53 O
ATOM 11 C2' G A1916 116.205 102.516 99.669 1.00 60.29 C
ATOM 12 O2' G A1916 115.486 102.060 100.793 1.00 59.90 O
ATOM 13 C1' G A1916 115.297 103.311 98.740 1.00 61.16 C
ATOM 14 N9 G A1916 114.380 102.513 97.929 1.00 62.47 N
ATOM 15 C8 G A1916 113.042 102.765 97.740 1.00 62.55 C
ATOM 16 N7 G A1916 112.430 101.822 97.076 1.00 62.22 N
ATOM 17 C5 G A1916 113.428 100.903 96.787 1.00 62.90 C
ATOM 18 C6 G A1916 113.357 99.657 96.116 1.00 63.35 C
ATOM 19 O6 G A1916 112.360 99.085 95.654 1.00 62.32 O
ATOM 20 N1 G A1916 114.612 99.059 96.017 1.00 63.98 N
ATOM 21 C2 G A1916 115.780 99.587 96.512 1.00 63.24 C
ATOM 22 N2 G A1916 116.891 98.871 96.288 1.00 63.70 N
ATOM 23 N3 G A1916 115.854 100.733 97.168 1.00 63.09 N
ATOM 24 C4 G A1916 114.649 101.334 97.269 1.00 62.73 C
ATOM 25 P G A1917 117.406 105.752 101.463 1.00 61.31 P
ATOM 26 OP1 G A1917 118.840 105.647 101.090 1.00 60.23 O
ATOM 27 OP2 G A1917 117.028 106.007 102.879 1.00 58.51 O
ATOM 28 O5' G A1917 116.677 106.859 100.574 1.00 62.89 O
TER

ATOM 1 O3' C B1904 111.039 105.943 99.085 1.00 69.76 O
ATOM 2 P G B1905 110.044 106.471 100.231 1.00 73.03 P
ATOM 3 OP1 G B1905 109.181 107.555 99.688 1.00 73.68 O
ATOM 4 OP2 G B1905 110.853 106.717 101.460 1.00 71.65 O
ATOM 5 O5' G B1905 109.094 105.225 100.492 1.00 75.82 O
ATOM 6 C5' G B1905 109.372 104.308 101.550 1.00 80.74 C
ATOM 7 C4' G B1905 108.726 102.982 101.271 1.00 83.06 C
ATOM 8 O4' G B1905 109.248 102.439 100.029 1.00 82.60 O
ATOM 9 C3' G B1905 109.064 101.919 102.296 1.00 85.77 C
ATOM 10 O3' G B1905 108.274 102.022 103.464 1.00 90.09 O
ATOM 11 C2' G B1905 108.831 100.638 101.516 1.00 85.88 C
ATOM 12 O2' G B1905 107.462 100.300 101.402 1.00 88.10 O
ATOM 13 C1' G B1905 109.402 101.034 100.154 1.00 83.97 C
ATOM 14 N9 G B1905 110.825 100.722 100.082 1.00 82.93 N
ATOM 15 C8 G B1905 111.878 101.528 100.443 1.00 82.13 C
ATOM 16 N7 G B1905 113.039 100.958 100.274 1.00 81.62 N
ATOM 17 C5 G B1905 112.734 99.703 99.769 1.00 82.45 C
ATOM 18 C6 G B1905 113.583 98.634 99.386 1.00 82.76 C
ATOM 19 O6 G B1905 114.820 98.583 99.407 1.00 82.03 O
ATOM 20 N1 G B1905 112.852 97.539 98.938 1.00 82.79 N
ATOM 21 C2 G B1905 111.482 97.481 98.869 1.00 83.59 C
ATOM 22 N2 G B1905 110.957 96.333 98.437 1.00 85.13 N
ATOM 23 N3 G B1905 110.684 98.473 99.206 1.00 83.41 N
ATOM 24 C4 G B1905 111.371 99.544 99.647 1.00 82.92 C
ATOM 25 P G B1906 108.811 101.377 104.828 1.00 93.79 P
ATOM 26 OP1 G B1906 107.948 101.883 105.927 1.00 93.68 O
ATOM 27 OP2 G B1906 110.284 101.578 104.899 1.00 93.35 O
ATOM 28 O5' G B1906 108.540 99.820 104.621 1.00 96.03 O
TER

Atoms:
OP1: (120.977,101.988,97.443)
OP2: (119.254,100.198,96.809)
C3': (117.246,103.573,100.006)
C1': (115.297,103.311,98.740)
C5': (118.583,103.835,97.855)
O6: (112.360,99.085,95.654)
O4': (116.180,104.036,97.918)
C8: (113.042,102.765,97.740)
C2: (115.780,99.587,96.512)
C6: (113.357,99.657,96.116)
C5: (113.428,100.903,96.787)
C4: (114.649,101.334,97.269)
P: (119.652,101.625,96.879)
C4': (117.403,104.301,98.668)
C2': (116.205,102.516,99.669)
O2': (115.486,102.060,100.793)
N1: (114.612,99.059,96.017)
N2: (116.891,98.871,96.288)
N3: (115.854,100.733,97.168)
N7: (112.430,101.822,97.076)
N9: (114.380,102.513,97.929)
O5': (118.530,102.406,97.694)
O3': (116.664,104.410,101.001)
OP1: (109.181,107.555,99.688)
OP2: (110.853,106.717,101.460)
C3': (109.064,101.919,102.296)
C1': (109.402,101.034,100.154)
C5': (109.372,104.308,101.550)
O6: (114.820,98.583,99.407)
O4': (109.248,102.439,100.029)
C8: (111.878,101.528,100.443)
C2: (111.482,97.481,98.869)
C6: (113.583,98.634,99.386)
C5: (112.734,99.703,99.769)
C4: (111.371,99.544,99.647)
P: (110.044,106.471,100.231)
C4': (108.726,102.982,101.271)
C2': (108.831,100.638,101.516)
O2': (107.462,100.300,101.402)
N1: (112.852,97.539,98.938)
N2: (110.957,96.333,98.437)
N3: (110.684,98.473,99.206)
N7: (113.039,100.958,100.274)
N9: (110.825,100.722,100.082)
O5': (109.094,105.225,100.492)
O3': (108.274,102.022,103.464)
Image (generated by PyMOL):
PyMOL image
show in jmol