Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01917:01905
Extra
PDB:
ATOM 1 O3' G A1916 116.664 104.410 101.001 1.00 61.53 O
ATOM 2 P G A1917 117.406 105.752 101.463 1.00 61.31 P
ATOM 3 OP1 G A1917 118.840 105.647 101.090 1.00 60.23 O
ATOM 4 OP2 G A1917 117.028 106.007 102.879 1.00 58.51 O
ATOM 5 O5' G A1917 116.677 106.859 100.574 1.00 62.89 O
ATOM 6 C5' G A1917 117.403 107.941 99.984 1.00 61.77 C
ATOM 7 C4' G A1917 116.796 109.272 100.382 1.00 61.20 C
ATOM 8 O4' G A1917 115.553 109.514 99.664 1.00 59.72 O
ATOM 9 C3' G A1917 116.452 109.488 101.863 1.00 60.41 C
ATOM 10 O3' G A1917 116.822 110.824 102.192 1.00 61.86 O
ATOM 11 C2' G A1917 114.926 109.458 101.849 1.00 59.16 C
ATOM 12 O2' G A1917 114.365 110.165 102.937 1.00 59.12 O
ATOM 13 C1' G A1917 114.689 110.194 100.538 1.00 59.74 C
ATOM 14 N9 G A1917 113.350 110.289 99.965 1.00 59.63 N
ATOM 15 C8 G A1917 112.256 109.504 100.227 1.00 59.95 C
ATOM 16 N7 G A1917 111.189 109.885 99.579 1.00 59.81 N
ATOM 17 C5 G A1917 111.609 110.978 98.834 1.00 59.86 C
ATOM 18 C6 G A1917 110.891 111.813 97.937 1.00 60.46 C
ATOM 19 O6 G A1917 109.703 111.744 97.603 1.00 60.42 O
ATOM 20 N1 G A1917 111.701 112.811 97.409 1.00 60.38 N
ATOM 21 C2 G A1917 113.027 112.985 97.699 1.00 59.68 C
ATOM 22 N2 G A1917 113.633 114.016 97.093 1.00 58.70 N
ATOM 23 N3 G A1917 113.709 112.210 98.524 1.00 59.19 N
ATOM 24 C4 G A1917 112.940 111.236 99.055 1.00 58.94 C
ATOM 25 P U A1918 117.124 111.232 103.716 1.00 65.10 P
ATOM 26 OP1 U A1918 117.295 110.005 104.543 1.00 66.20 O
ATOM 27 OP2 U A1918 116.120 112.251 104.126 1.00 63.50 O
ATOM 28 O5' U A1918 118.534 111.965 103.598 1.00 65.01 O
TER
ATOM 1 O3' C B1904 111.039 105.943 99.085 1.00 69.76 O
ATOM 2 P G B1905 110.044 106.471 100.231 1.00 73.03 P
ATOM 3 OP1 G B1905 109.181 107.555 99.688 1.00 73.68 O
ATOM 4 OP2 G B1905 110.853 106.717 101.460 1.00 71.65 O
ATOM 5 O5' G B1905 109.094 105.225 100.492 1.00 75.82 O
ATOM 6 C5' G B1905 109.372 104.308 101.550 1.00 80.74 C
ATOM 7 C4' G B1905 108.726 102.982 101.271 1.00 83.06 C
ATOM 8 O4' G B1905 109.248 102.439 100.029 1.00 82.60 O
ATOM 9 C3' G B1905 109.064 101.919 102.296 1.00 85.77 C
ATOM 10 O3' G B1905 108.274 102.022 103.464 1.00 90.09 O
ATOM 11 C2' G B1905 108.831 100.638 101.516 1.00 85.88 C
ATOM 12 O2' G B1905 107.462 100.300 101.402 1.00 88.10 O
ATOM 13 C1' G B1905 109.402 101.034 100.154 1.00 83.97 C
ATOM 14 N9 G B1905 110.825 100.722 100.082 1.00 82.93 N
ATOM 15 C8 G B1905 111.878 101.528 100.443 1.00 82.13 C
ATOM 16 N7 G B1905 113.039 100.958 100.274 1.00 81.62 N
ATOM 17 C5 G B1905 112.734 99.703 99.769 1.00 82.45 C
ATOM 18 C6 G B1905 113.583 98.634 99.386 1.00 82.76 C
ATOM 19 O6 G B1905 114.820 98.583 99.407 1.00 82.03 O
ATOM 20 N1 G B1905 112.852 97.539 98.938 1.00 82.79 N
ATOM 21 C2 G B1905 111.482 97.481 98.869 1.00 83.59 C
ATOM 22 N2 G B1905 110.957 96.333 98.437 1.00 85.13 N
ATOM 23 N3 G B1905 110.684 98.473 99.206 1.00 83.41 N
ATOM 24 C4 G B1905 111.371 99.544 99.647 1.00 82.92 C
ATOM 25 P G B1906 108.811 101.377 104.828 1.00 93.79 P
ATOM 26 OP1 G B1906 107.948 101.883 105.927 1.00 93.68 O
ATOM 27 OP2 G B1906 110.284 101.578 104.899 1.00 93.35 O
ATOM 28 O5' G B1906 108.540 99.820 104.621 1.00 96.03 O
TER
ATOM 2 P G A1917 117.406 105.752 101.463 1.00 61.31 P
ATOM 3 OP1 G A1917 118.840 105.647 101.090 1.00 60.23 O
ATOM 4 OP2 G A1917 117.028 106.007 102.879 1.00 58.51 O
ATOM 5 O5' G A1917 116.677 106.859 100.574 1.00 62.89 O
ATOM 6 C5' G A1917 117.403 107.941 99.984 1.00 61.77 C
ATOM 7 C4' G A1917 116.796 109.272 100.382 1.00 61.20 C
ATOM 8 O4' G A1917 115.553 109.514 99.664 1.00 59.72 O
ATOM 9 C3' G A1917 116.452 109.488 101.863 1.00 60.41 C
ATOM 10 O3' G A1917 116.822 110.824 102.192 1.00 61.86 O
ATOM 11 C2' G A1917 114.926 109.458 101.849 1.00 59.16 C
ATOM 12 O2' G A1917 114.365 110.165 102.937 1.00 59.12 O
ATOM 13 C1' G A1917 114.689 110.194 100.538 1.00 59.74 C
ATOM 14 N9 G A1917 113.350 110.289 99.965 1.00 59.63 N
ATOM 15 C8 G A1917 112.256 109.504 100.227 1.00 59.95 C
ATOM 16 N7 G A1917 111.189 109.885 99.579 1.00 59.81 N
ATOM 17 C5 G A1917 111.609 110.978 98.834 1.00 59.86 C
ATOM 18 C6 G A1917 110.891 111.813 97.937 1.00 60.46 C
ATOM 19 O6 G A1917 109.703 111.744 97.603 1.00 60.42 O
ATOM 20 N1 G A1917 111.701 112.811 97.409 1.00 60.38 N
ATOM 21 C2 G A1917 113.027 112.985 97.699 1.00 59.68 C
ATOM 22 N2 G A1917 113.633 114.016 97.093 1.00 58.70 N
ATOM 23 N3 G A1917 113.709 112.210 98.524 1.00 59.19 N
ATOM 24 C4 G A1917 112.940 111.236 99.055 1.00 58.94 C
ATOM 25 P U A1918 117.124 111.232 103.716 1.00 65.10 P
ATOM 26 OP1 U A1918 117.295 110.005 104.543 1.00 66.20 O
ATOM 27 OP2 U A1918 116.120 112.251 104.126 1.00 63.50 O
ATOM 28 O5' U A1918 118.534 111.965 103.598 1.00 65.01 O
TER
ATOM 1 O3' C B1904 111.039 105.943 99.085 1.00 69.76 O
ATOM 2 P G B1905 110.044 106.471 100.231 1.00 73.03 P
ATOM 3 OP1 G B1905 109.181 107.555 99.688 1.00 73.68 O
ATOM 4 OP2 G B1905 110.853 106.717 101.460 1.00 71.65 O
ATOM 5 O5' G B1905 109.094 105.225 100.492 1.00 75.82 O
ATOM 6 C5' G B1905 109.372 104.308 101.550 1.00 80.74 C
ATOM 7 C4' G B1905 108.726 102.982 101.271 1.00 83.06 C
ATOM 8 O4' G B1905 109.248 102.439 100.029 1.00 82.60 O
ATOM 9 C3' G B1905 109.064 101.919 102.296 1.00 85.77 C
ATOM 10 O3' G B1905 108.274 102.022 103.464 1.00 90.09 O
ATOM 11 C2' G B1905 108.831 100.638 101.516 1.00 85.88 C
ATOM 12 O2' G B1905 107.462 100.300 101.402 1.00 88.10 O
ATOM 13 C1' G B1905 109.402 101.034 100.154 1.00 83.97 C
ATOM 14 N9 G B1905 110.825 100.722 100.082 1.00 82.93 N
ATOM 15 C8 G B1905 111.878 101.528 100.443 1.00 82.13 C
ATOM 16 N7 G B1905 113.039 100.958 100.274 1.00 81.62 N
ATOM 17 C5 G B1905 112.734 99.703 99.769 1.00 82.45 C
ATOM 18 C6 G B1905 113.583 98.634 99.386 1.00 82.76 C
ATOM 19 O6 G B1905 114.820 98.583 99.407 1.00 82.03 O
ATOM 20 N1 G B1905 112.852 97.539 98.938 1.00 82.79 N
ATOM 21 C2 G B1905 111.482 97.481 98.869 1.00 83.59 C
ATOM 22 N2 G B1905 110.957 96.333 98.437 1.00 85.13 N
ATOM 23 N3 G B1905 110.684 98.473 99.206 1.00 83.41 N
ATOM 24 C4 G B1905 111.371 99.544 99.647 1.00 82.92 C
ATOM 25 P G B1906 108.811 101.377 104.828 1.00 93.79 P
ATOM 26 OP1 G B1906 107.948 101.883 105.927 1.00 93.68 O
ATOM 27 OP2 G B1906 110.284 101.578 104.899 1.00 93.35 O
ATOM 28 O5' G B1906 108.540 99.820 104.621 1.00 96.03 O
TER
Atoms:
OP1: (118.840,105.647,101.090)
OP2: (117.028,106.007,102.879)
C3': (116.452,109.488,101.863)
C1': (114.689,110.194,100.538)
C5': (117.403,107.941,99.984)
O6: (109.703,111.744,97.603)
O4': (115.553,109.514,99.664)
C8: (112.256,109.504,100.227)
C2: (113.027,112.985,97.699)
C6: (110.891,111.813,97.937)
C5: (111.609,110.978,98.834)
C4: (112.940,111.236,99.055)
P: (117.406,105.752,101.463)
C4': (116.796,109.272,100.382)
C2': (114.926,109.458,101.849)
O2': (114.365,110.165,102.937)
N1: (111.701,112.811,97.409)
N2: (113.633,114.016,97.093)
N3: (113.709,112.210,98.524)
N7: (111.189,109.885,99.579)
N9: (113.350,110.289,99.965)
O5': (116.677,106.859,100.574)
O3': (116.822,110.824,102.192)
OP2: (117.028,106.007,102.879)
C3': (116.452,109.488,101.863)
C1': (114.689,110.194,100.538)
C5': (117.403,107.941,99.984)
O6: (109.703,111.744,97.603)
O4': (115.553,109.514,99.664)
C8: (112.256,109.504,100.227)
C2: (113.027,112.985,97.699)
C6: (110.891,111.813,97.937)
C5: (111.609,110.978,98.834)
C4: (112.940,111.236,99.055)
P: (117.406,105.752,101.463)
C4': (116.796,109.272,100.382)
C2': (114.926,109.458,101.849)
O2': (114.365,110.165,102.937)
N1: (111.701,112.811,97.409)
N2: (113.633,114.016,97.093)
N3: (113.709,112.210,98.524)
N7: (111.189,109.885,99.579)
N9: (113.350,110.289,99.965)
O5': (116.677,106.859,100.574)
O3': (116.822,110.824,102.192)
OP1: (109.181,107.555,99.688)
OP2: (110.853,106.717,101.460)
C3': (109.064,101.919,102.296)
C1': (109.402,101.034,100.154)
C5': (109.372,104.308,101.550)
O6: (114.820,98.583,99.407)
O4': (109.248,102.439,100.029)
C8: (111.878,101.528,100.443)
C2: (111.482,97.481,98.869)
C6: (113.583,98.634,99.386)
C5: (112.734,99.703,99.769)
C4: (111.371,99.544,99.647)
P: (110.044,106.471,100.231)
C4': (108.726,102.982,101.271)
C2': (108.831,100.638,101.516)
O2': (107.462,100.300,101.402)
N1: (112.852,97.539,98.938)
N2: (110.957,96.333,98.437)
N3: (110.684,98.473,99.206)
N7: (113.039,100.958,100.274)
N9: (110.825,100.722,100.082)
O5': (109.094,105.225,100.492)
O3': (108.274,102.022,103.464)
OP2: (110.853,106.717,101.460)
C3': (109.064,101.919,102.296)
C1': (109.402,101.034,100.154)
C5': (109.372,104.308,101.550)
O6: (114.820,98.583,99.407)
O4': (109.248,102.439,100.029)
C8: (111.878,101.528,100.443)
C2: (111.482,97.481,98.869)
C6: (113.583,98.634,99.386)
C5: (112.734,99.703,99.769)
C4: (111.371,99.544,99.647)
P: (110.044,106.471,100.231)
C4': (108.726,102.982,101.271)
C2': (108.831,100.638,101.516)
O2': (107.462,100.300,101.402)
N1: (112.852,97.539,98.938)
N2: (110.957,96.333,98.437)
N3: (110.684,98.473,99.206)
N7: (113.039,100.958,100.274)
N9: (110.825,100.722,100.082)
O5': (109.094,105.225,100.492)
O3': (108.274,102.022,103.464)
Image (generated by PyMOL):