Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01917:01905
Extra
PDB:
ATOM 1 O3' G A1916 116.933 104.560 101.354 1.00 69.91 O
ATOM 2 P G A1917 117.750 105.828 101.893 1.00 68.60 P
ATOM 3 OP1 G A1917 119.134 105.737 101.355 1.00 69.27 O
ATOM 4 OP2 G A1917 117.534 105.949 103.354 1.00 67.40 O
ATOM 5 O5' G A1917 116.976 107.047 101.216 1.00 70.95 O
ATOM 6 C5' G A1917 117.686 108.072 100.510 1.00 71.34 C
ATOM 7 C4' G A1917 117.156 109.435 100.886 1.00 70.28 C
ATOM 8 O4' G A1917 115.924 109.700 100.163 1.00 69.12 O
ATOM 9 C3' G A1917 116.819 109.676 102.365 1.00 70.32 C
ATOM 10 O3' G A1917 117.208 111.007 102.691 1.00 71.14 O
ATOM 11 C2' G A1917 115.295 109.664 102.354 1.00 70.03 C
ATOM 12 O2' G A1917 114.747 110.368 103.454 1.00 70.80 O
ATOM 13 C1' G A1917 115.063 110.386 101.031 1.00 69.93 C
ATOM 14 N9 G A1917 113.729 110.480 100.445 1.00 69.25 N
ATOM 15 C8 G A1917 112.627 109.713 100.719 1.00 68.93 C
ATOM 16 N7 G A1917 111.568 110.092 100.062 1.00 70.01 N
ATOM 17 C5 G A1917 112.000 111.167 99.298 1.00 70.17 C
ATOM 18 C6 G A1917 111.292 111.999 98.390 1.00 70.61 C
ATOM 19 O6 G A1917 110.102 111.955 98.076 1.00 72.24 O
ATOM 20 N1 G A1917 112.116 112.965 97.829 1.00 69.68 N
ATOM 21 C2 G A1917 113.443 113.119 98.105 1.00 68.92 C
ATOM 22 N2 G A1917 114.064 114.109 97.459 1.00 67.75 N
ATOM 23 N3 G A1917 114.113 112.360 98.952 1.00 69.65 N
ATOM 24 C4 G A1917 113.332 111.410 99.510 1.00 69.40 C
ATOM 25 P U A1918 117.403 111.449 104.226 1.00 72.41 P
ATOM 26 OP1 U A1918 117.503 110.237 105.089 1.00 73.08 O
ATOM 27 OP2 U A1918 116.379 112.478 104.539 1.00 71.26 O
ATOM 28 O5' U A1918 118.823 112.172 104.182 1.00 73.30 O
TER
ATOM 1 O3' C B1904 111.696 106.155 99.445 1.00 80.24 O
ATOM 2 P G B1905 110.590 106.476 100.560 1.00 82.58 P
ATOM 3 OP1 G B1905 109.633 107.474 100.013 1.00 82.73 O
ATOM 4 OP2 G B1905 111.277 106.746 101.852 1.00 81.27 O
ATOM 5 O5' G B1905 109.811 105.100 100.695 1.00 85.73 O
ATOM 6 C5' G B1905 110.045 104.242 101.810 1.00 90.58 C
ATOM 7 C4' G B1905 109.299 102.954 101.634 1.00 93.37 C
ATOM 8 O4' G B1905 109.726 102.322 100.402 1.00 93.15 O
ATOM 9 C3' G B1905 109.609 101.927 102.703 1.00 95.87 C
ATOM 10 O3' G B1905 108.854 102.132 103.882 1.00100.63 O
ATOM 11 C2' G B1905 109.297 100.624 101.995 1.00 95.68 C
ATOM 12 O2' G B1905 107.909 100.358 101.923 1.00 96.30 O
ATOM 13 C1' G B1905 109.860 100.925 100.606 1.00 94.94 C
ATOM 14 N9 G B1905 111.281 100.601 100.527 1.00 95.48 N
ATOM 15 C8 G B1905 112.336 101.378 100.945 1.00 95.17 C
ATOM 16 N7 G B1905 113.495 100.815 100.746 1.00 95.30 N
ATOM 17 C5 G B1905 113.189 99.595 100.164 1.00 95.45 C
ATOM 18 C6 G B1905 114.036 98.552 99.721 1.00 95.75 C
ATOM 19 O6 G B1905 115.270 98.495 99.753 1.00 95.82 O
ATOM 20 N1 G B1905 113.308 97.492 99.196 1.00 95.99 N
ATOM 21 C2 G B1905 111.940 97.443 99.109 1.00 96.64 C
ATOM 22 N2 G B1905 111.418 96.331 98.589 1.00 98.15 N
ATOM 23 N3 G B1905 111.141 98.410 99.508 1.00 96.83 N
ATOM 24 C4 G B1905 111.827 99.448 100.023 1.00 95.98 C
ATOM 25 P G B1906 109.388 101.528 105.268 1.00104.32 P
ATOM 26 OP1 G B1906 108.522 102.070 106.348 1.00104.18 O
ATOM 27 OP2 G B1906 110.863 101.742 105.333 1.00104.19 O
ATOM 28 O5' G B1906 109.119 99.962 105.113 1.00105.85 O
TER
ATOM 2 P G A1917 117.750 105.828 101.893 1.00 68.60 P
ATOM 3 OP1 G A1917 119.134 105.737 101.355 1.00 69.27 O
ATOM 4 OP2 G A1917 117.534 105.949 103.354 1.00 67.40 O
ATOM 5 O5' G A1917 116.976 107.047 101.216 1.00 70.95 O
ATOM 6 C5' G A1917 117.686 108.072 100.510 1.00 71.34 C
ATOM 7 C4' G A1917 117.156 109.435 100.886 1.00 70.28 C
ATOM 8 O4' G A1917 115.924 109.700 100.163 1.00 69.12 O
ATOM 9 C3' G A1917 116.819 109.676 102.365 1.00 70.32 C
ATOM 10 O3' G A1917 117.208 111.007 102.691 1.00 71.14 O
ATOM 11 C2' G A1917 115.295 109.664 102.354 1.00 70.03 C
ATOM 12 O2' G A1917 114.747 110.368 103.454 1.00 70.80 O
ATOM 13 C1' G A1917 115.063 110.386 101.031 1.00 69.93 C
ATOM 14 N9 G A1917 113.729 110.480 100.445 1.00 69.25 N
ATOM 15 C8 G A1917 112.627 109.713 100.719 1.00 68.93 C
ATOM 16 N7 G A1917 111.568 110.092 100.062 1.00 70.01 N
ATOM 17 C5 G A1917 112.000 111.167 99.298 1.00 70.17 C
ATOM 18 C6 G A1917 111.292 111.999 98.390 1.00 70.61 C
ATOM 19 O6 G A1917 110.102 111.955 98.076 1.00 72.24 O
ATOM 20 N1 G A1917 112.116 112.965 97.829 1.00 69.68 N
ATOM 21 C2 G A1917 113.443 113.119 98.105 1.00 68.92 C
ATOM 22 N2 G A1917 114.064 114.109 97.459 1.00 67.75 N
ATOM 23 N3 G A1917 114.113 112.360 98.952 1.00 69.65 N
ATOM 24 C4 G A1917 113.332 111.410 99.510 1.00 69.40 C
ATOM 25 P U A1918 117.403 111.449 104.226 1.00 72.41 P
ATOM 26 OP1 U A1918 117.503 110.237 105.089 1.00 73.08 O
ATOM 27 OP2 U A1918 116.379 112.478 104.539 1.00 71.26 O
ATOM 28 O5' U A1918 118.823 112.172 104.182 1.00 73.30 O
TER
ATOM 1 O3' C B1904 111.696 106.155 99.445 1.00 80.24 O
ATOM 2 P G B1905 110.590 106.476 100.560 1.00 82.58 P
ATOM 3 OP1 G B1905 109.633 107.474 100.013 1.00 82.73 O
ATOM 4 OP2 G B1905 111.277 106.746 101.852 1.00 81.27 O
ATOM 5 O5' G B1905 109.811 105.100 100.695 1.00 85.73 O
ATOM 6 C5' G B1905 110.045 104.242 101.810 1.00 90.58 C
ATOM 7 C4' G B1905 109.299 102.954 101.634 1.00 93.37 C
ATOM 8 O4' G B1905 109.726 102.322 100.402 1.00 93.15 O
ATOM 9 C3' G B1905 109.609 101.927 102.703 1.00 95.87 C
ATOM 10 O3' G B1905 108.854 102.132 103.882 1.00100.63 O
ATOM 11 C2' G B1905 109.297 100.624 101.995 1.00 95.68 C
ATOM 12 O2' G B1905 107.909 100.358 101.923 1.00 96.30 O
ATOM 13 C1' G B1905 109.860 100.925 100.606 1.00 94.94 C
ATOM 14 N9 G B1905 111.281 100.601 100.527 1.00 95.48 N
ATOM 15 C8 G B1905 112.336 101.378 100.945 1.00 95.17 C
ATOM 16 N7 G B1905 113.495 100.815 100.746 1.00 95.30 N
ATOM 17 C5 G B1905 113.189 99.595 100.164 1.00 95.45 C
ATOM 18 C6 G B1905 114.036 98.552 99.721 1.00 95.75 C
ATOM 19 O6 G B1905 115.270 98.495 99.753 1.00 95.82 O
ATOM 20 N1 G B1905 113.308 97.492 99.196 1.00 95.99 N
ATOM 21 C2 G B1905 111.940 97.443 99.109 1.00 96.64 C
ATOM 22 N2 G B1905 111.418 96.331 98.589 1.00 98.15 N
ATOM 23 N3 G B1905 111.141 98.410 99.508 1.00 96.83 N
ATOM 24 C4 G B1905 111.827 99.448 100.023 1.00 95.98 C
ATOM 25 P G B1906 109.388 101.528 105.268 1.00104.32 P
ATOM 26 OP1 G B1906 108.522 102.070 106.348 1.00104.18 O
ATOM 27 OP2 G B1906 110.863 101.742 105.333 1.00104.19 O
ATOM 28 O5' G B1906 109.119 99.962 105.113 1.00105.85 O
TER
Atoms:
OP1: (119.134,105.737,101.355)
OP2: (117.534,105.949,103.354)
C3': (116.819,109.676,102.365)
C1': (115.063,110.386,101.031)
C5': (117.686,108.072,100.510)
O6: (110.102,111.955,98.076)
O4': (115.924,109.700,100.163)
C8: (112.627,109.713,100.719)
C2: (113.443,113.119,98.105)
C6: (111.292,111.999,98.390)
C5: (112.000,111.167,99.298)
C4: (113.332,111.410,99.510)
P: (117.750,105.828,101.893)
C4': (117.156,109.435,100.886)
C2': (115.295,109.664,102.354)
O2': (114.747,110.368,103.454)
N1: (112.116,112.965,97.829)
N2: (114.064,114.109,97.459)
N3: (114.113,112.360,98.952)
N7: (111.568,110.092,100.062)
N9: (113.729,110.480,100.445)
O5': (116.976,107.047,101.216)
O3': (117.208,111.007,102.691)
OP2: (117.534,105.949,103.354)
C3': (116.819,109.676,102.365)
C1': (115.063,110.386,101.031)
C5': (117.686,108.072,100.510)
O6: (110.102,111.955,98.076)
O4': (115.924,109.700,100.163)
C8: (112.627,109.713,100.719)
C2: (113.443,113.119,98.105)
C6: (111.292,111.999,98.390)
C5: (112.000,111.167,99.298)
C4: (113.332,111.410,99.510)
P: (117.750,105.828,101.893)
C4': (117.156,109.435,100.886)
C2': (115.295,109.664,102.354)
O2': (114.747,110.368,103.454)
N1: (112.116,112.965,97.829)
N2: (114.064,114.109,97.459)
N3: (114.113,112.360,98.952)
N7: (111.568,110.092,100.062)
N9: (113.729,110.480,100.445)
O5': (116.976,107.047,101.216)
O3': (117.208,111.007,102.691)
OP1: (109.633,107.474,100.013)
OP2: (111.277,106.746,101.852)
C3': (109.609,101.927,102.703)
C1': (109.860,100.925,100.606)
C5': (110.045,104.242,101.810)
O6: (115.270,98.495,99.753)
O4': (109.726,102.322,100.402)
C8: (112.336,101.378,100.945)
C2: (111.940,97.443,99.109)
C6: (114.036,98.552,99.721)
C5: (113.189,99.595,100.164)
C4: (111.827,99.448,100.023)
P: (110.590,106.476,100.560)
C4': (109.299,102.954,101.634)
C2': (109.297,100.624,101.995)
O2': (107.909,100.358,101.923)
N1: (113.308,97.492,99.196)
N2: (111.418,96.331,98.589)
N3: (111.141,98.410,99.508)
N7: (113.495,100.815,100.746)
N9: (111.281,100.601,100.527)
O5': (109.811,105.100,100.695)
O3': (108.854,102.132,103.882)
OP2: (111.277,106.746,101.852)
C3': (109.609,101.927,102.703)
C1': (109.860,100.925,100.606)
C5': (110.045,104.242,101.810)
O6: (115.270,98.495,99.753)
O4': (109.726,102.322,100.402)
C8: (112.336,101.378,100.945)
C2: (111.940,97.443,99.109)
C6: (114.036,98.552,99.721)
C5: (113.189,99.595,100.164)
C4: (111.827,99.448,100.023)
P: (110.590,106.476,100.560)
C4': (109.299,102.954,101.634)
C2': (109.297,100.624,101.995)
O2': (107.909,100.358,101.923)
N1: (113.308,97.492,99.196)
N2: (111.418,96.331,98.589)
N3: (111.141,98.410,99.508)
N7: (113.495,100.815,100.746)
N9: (111.281,100.601,100.527)
O5': (109.811,105.100,100.695)
O3': (108.854,102.132,103.882)
Image (generated by PyMOL):