Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01917:01905
Extra
PDB:
ATOM 1 O3' G A1916 116.668 104.343 100.922 1.00 65.49 O
ATOM 2 P G A1917 117.419 105.656 101.439 1.00 63.91 P
ATOM 3 OP1 G A1917 118.836 105.595 101.001 1.00 62.93 O
ATOM 4 OP2 G A1917 117.097 105.807 102.879 1.00 62.99 O
ATOM 5 O5' G A1917 116.652 106.811 100.651 1.00 67.30 O
ATOM 6 C5' G A1917 117.368 107.843 99.951 1.00 68.06 C
ATOM 7 C4' G A1917 116.833 109.208 100.331 1.00 68.00 C
ATOM 8 O4' G A1917 115.607 109.499 99.602 1.00 67.65 O
ATOM 9 C3' G A1917 116.481 109.431 101.808 1.00 67.61 C
ATOM 10 O3' G A1917 116.839 110.772 102.121 1.00 67.38 O
ATOM 11 C2' G A1917 114.957 109.391 101.781 1.00 67.22 C
ATOM 12 O2' G A1917 114.373 110.069 102.872 1.00 70.27 O
ATOM 13 C1' G A1917 114.732 110.154 100.484 1.00 67.11 C
ATOM 14 N9 G A1917 113.402 110.243 99.895 1.00 66.36 N
ATOM 15 C8 G A1917 112.310 109.455 100.145 1.00 67.14 C
ATOM 16 N7 G A1917 111.259 109.812 99.461 1.00 67.94 N
ATOM 17 C5 G A1917 111.689 110.896 98.709 1.00 67.44 C
ATOM 18 C6 G A1917 110.991 111.704 97.776 1.00 67.77 C
ATOM 19 O6 G A1917 109.819 111.610 97.402 1.00 69.46 O
ATOM 20 N1 G A1917 111.801 112.707 97.260 1.00 66.79 N
ATOM 21 C2 G A1917 113.110 112.905 97.590 1.00 66.48 C
ATOM 22 N2 G A1917 113.718 113.937 96.993 1.00 66.18 N
ATOM 23 N3 G A1917 113.775 112.152 98.445 1.00 66.91 N
ATOM 24 C4 G A1917 113.005 111.174 98.966 1.00 66.43 C
ATOM 25 P U A1918 117.166 111.194 103.633 1.00 68.01 P
ATOM 26 OP1 U A1918 117.309 109.982 104.482 1.00 68.83 O
ATOM 27 OP2 U A1918 116.187 112.243 104.026 1.00 66.07 O
ATOM 28 O5' U A1918 118.593 111.885 103.475 1.00 68.48 O
TER
ATOM 1 O3' C B1904 111.325 106.007 99.028 1.00 79.12 O
ATOM 2 P G B1905 110.288 106.491 100.156 1.00 82.38 P
ATOM 3 OP1 G B1905 109.389 107.538 99.599 1.00 82.45 O
ATOM 4 OP2 G B1905 111.057 106.767 101.403 1.00 82.04 O
ATOM 5 O5' G B1905 109.392 105.203 100.395 1.00 85.57 O
ATOM 6 C5' G B1905 109.688 104.295 101.459 1.00 90.65 C
ATOM 7 C4' G B1905 108.988 102.988 101.224 1.00 93.52 C
ATOM 8 O4' G B1905 109.481 102.395 99.997 1.00 92.63 O
ATOM 9 C3' G B1905 109.260 101.936 102.280 1.00 95.66 C
ATOM 10 O3' G B1905 108.417 102.101 103.404 1.00 99.54 O
ATOM 11 C2' G B1905 108.988 100.647 101.527 1.00 95.51 C
ATOM 12 O2' G B1905 107.608 100.358 101.411 1.00 97.24 O
ATOM 13 C1' G B1905 109.572 100.991 100.156 1.00 94.28 C
ATOM 14 N9 G B1905 110.978 100.621 100.068 1.00 94.14 N
ATOM 15 C8 G B1905 112.067 101.377 100.431 1.00 93.94 C
ATOM 16 N7 G B1905 113.201 100.765 100.231 1.00 93.84 N
ATOM 17 C5 G B1905 112.837 99.535 99.706 1.00 93.94 C
ATOM 18 C6 G B1905 113.634 98.448 99.289 1.00 94.13 C
ATOM 19 O6 G B1905 114.869 98.352 99.290 1.00 93.97 O
ATOM 20 N1 G B1905 112.852 97.393 98.828 1.00 94.26 N
ATOM 21 C2 G B1905 111.478 97.389 98.780 1.00 94.46 C
ATOM 22 N2 G B1905 110.896 96.276 98.331 1.00 95.85 N
ATOM 23 N3 G B1905 110.729 98.402 99.153 1.00 94.20 N
ATOM 24 C4 G B1905 111.468 99.433 99.604 1.00 94.23 C
ATOM 25 P G B1906 108.853 101.476 104.810 1.00102.89 P
ATOM 26 OP1 G B1906 107.869 101.950 105.817 1.00102.59 O
ATOM 27 OP2 G B1906 110.302 101.762 105.008 1.00102.81 O
ATOM 28 O5' G B1906 108.670 99.906 104.592 1.00104.00 O
TER
ATOM 2 P G A1917 117.419 105.656 101.439 1.00 63.91 P
ATOM 3 OP1 G A1917 118.836 105.595 101.001 1.00 62.93 O
ATOM 4 OP2 G A1917 117.097 105.807 102.879 1.00 62.99 O
ATOM 5 O5' G A1917 116.652 106.811 100.651 1.00 67.30 O
ATOM 6 C5' G A1917 117.368 107.843 99.951 1.00 68.06 C
ATOM 7 C4' G A1917 116.833 109.208 100.331 1.00 68.00 C
ATOM 8 O4' G A1917 115.607 109.499 99.602 1.00 67.65 O
ATOM 9 C3' G A1917 116.481 109.431 101.808 1.00 67.61 C
ATOM 10 O3' G A1917 116.839 110.772 102.121 1.00 67.38 O
ATOM 11 C2' G A1917 114.957 109.391 101.781 1.00 67.22 C
ATOM 12 O2' G A1917 114.373 110.069 102.872 1.00 70.27 O
ATOM 13 C1' G A1917 114.732 110.154 100.484 1.00 67.11 C
ATOM 14 N9 G A1917 113.402 110.243 99.895 1.00 66.36 N
ATOM 15 C8 G A1917 112.310 109.455 100.145 1.00 67.14 C
ATOM 16 N7 G A1917 111.259 109.812 99.461 1.00 67.94 N
ATOM 17 C5 G A1917 111.689 110.896 98.709 1.00 67.44 C
ATOM 18 C6 G A1917 110.991 111.704 97.776 1.00 67.77 C
ATOM 19 O6 G A1917 109.819 111.610 97.402 1.00 69.46 O
ATOM 20 N1 G A1917 111.801 112.707 97.260 1.00 66.79 N
ATOM 21 C2 G A1917 113.110 112.905 97.590 1.00 66.48 C
ATOM 22 N2 G A1917 113.718 113.937 96.993 1.00 66.18 N
ATOM 23 N3 G A1917 113.775 112.152 98.445 1.00 66.91 N
ATOM 24 C4 G A1917 113.005 111.174 98.966 1.00 66.43 C
ATOM 25 P U A1918 117.166 111.194 103.633 1.00 68.01 P
ATOM 26 OP1 U A1918 117.309 109.982 104.482 1.00 68.83 O
ATOM 27 OP2 U A1918 116.187 112.243 104.026 1.00 66.07 O
ATOM 28 O5' U A1918 118.593 111.885 103.475 1.00 68.48 O
TER
ATOM 1 O3' C B1904 111.325 106.007 99.028 1.00 79.12 O
ATOM 2 P G B1905 110.288 106.491 100.156 1.00 82.38 P
ATOM 3 OP1 G B1905 109.389 107.538 99.599 1.00 82.45 O
ATOM 4 OP2 G B1905 111.057 106.767 101.403 1.00 82.04 O
ATOM 5 O5' G B1905 109.392 105.203 100.395 1.00 85.57 O
ATOM 6 C5' G B1905 109.688 104.295 101.459 1.00 90.65 C
ATOM 7 C4' G B1905 108.988 102.988 101.224 1.00 93.52 C
ATOM 8 O4' G B1905 109.481 102.395 99.997 1.00 92.63 O
ATOM 9 C3' G B1905 109.260 101.936 102.280 1.00 95.66 C
ATOM 10 O3' G B1905 108.417 102.101 103.404 1.00 99.54 O
ATOM 11 C2' G B1905 108.988 100.647 101.527 1.00 95.51 C
ATOM 12 O2' G B1905 107.608 100.358 101.411 1.00 97.24 O
ATOM 13 C1' G B1905 109.572 100.991 100.156 1.00 94.28 C
ATOM 14 N9 G B1905 110.978 100.621 100.068 1.00 94.14 N
ATOM 15 C8 G B1905 112.067 101.377 100.431 1.00 93.94 C
ATOM 16 N7 G B1905 113.201 100.765 100.231 1.00 93.84 N
ATOM 17 C5 G B1905 112.837 99.535 99.706 1.00 93.94 C
ATOM 18 C6 G B1905 113.634 98.448 99.289 1.00 94.13 C
ATOM 19 O6 G B1905 114.869 98.352 99.290 1.00 93.97 O
ATOM 20 N1 G B1905 112.852 97.393 98.828 1.00 94.26 N
ATOM 21 C2 G B1905 111.478 97.389 98.780 1.00 94.46 C
ATOM 22 N2 G B1905 110.896 96.276 98.331 1.00 95.85 N
ATOM 23 N3 G B1905 110.729 98.402 99.153 1.00 94.20 N
ATOM 24 C4 G B1905 111.468 99.433 99.604 1.00 94.23 C
ATOM 25 P G B1906 108.853 101.476 104.810 1.00102.89 P
ATOM 26 OP1 G B1906 107.869 101.950 105.817 1.00102.59 O
ATOM 27 OP2 G B1906 110.302 101.762 105.008 1.00102.81 O
ATOM 28 O5' G B1906 108.670 99.906 104.592 1.00104.00 O
TER
Atoms:
OP1: (118.836,105.595,101.001)
OP2: (117.097,105.807,102.879)
C3': (116.481,109.431,101.808)
C1': (114.732,110.154,100.484)
C5': (117.368,107.843,99.951)
O6: (109.819,111.610,97.402)
O4': (115.607,109.499,99.602)
C8: (112.310,109.455,100.145)
C2: (113.110,112.905,97.590)
C6: (110.991,111.704,97.776)
C5: (111.689,110.896,98.709)
C4: (113.005,111.174,98.966)
P: (117.419,105.656,101.439)
C4': (116.833,109.208,100.331)
C2': (114.957,109.391,101.781)
O2': (114.373,110.069,102.872)
N1: (111.801,112.707,97.260)
N2: (113.718,113.937,96.993)
N3: (113.775,112.152,98.445)
N7: (111.259,109.812,99.461)
N9: (113.402,110.243,99.895)
O5': (116.652,106.811,100.651)
O3': (116.839,110.772,102.121)
OP2: (117.097,105.807,102.879)
C3': (116.481,109.431,101.808)
C1': (114.732,110.154,100.484)
C5': (117.368,107.843,99.951)
O6: (109.819,111.610,97.402)
O4': (115.607,109.499,99.602)
C8: (112.310,109.455,100.145)
C2: (113.110,112.905,97.590)
C6: (110.991,111.704,97.776)
C5: (111.689,110.896,98.709)
C4: (113.005,111.174,98.966)
P: (117.419,105.656,101.439)
C4': (116.833,109.208,100.331)
C2': (114.957,109.391,101.781)
O2': (114.373,110.069,102.872)
N1: (111.801,112.707,97.260)
N2: (113.718,113.937,96.993)
N3: (113.775,112.152,98.445)
N7: (111.259,109.812,99.461)
N9: (113.402,110.243,99.895)
O5': (116.652,106.811,100.651)
O3': (116.839,110.772,102.121)
OP1: (109.389,107.538,99.599)
OP2: (111.057,106.767,101.403)
C3': (109.260,101.936,102.280)
C1': (109.572,100.991,100.156)
C5': (109.688,104.295,101.459)
O6: (114.869,98.352,99.290)
O4': (109.481,102.395,99.997)
C8: (112.067,101.377,100.431)
C2: (111.478,97.389,98.780)
C6: (113.634,98.448,99.289)
C5: (112.837,99.535,99.706)
C4: (111.468,99.433,99.604)
P: (110.288,106.491,100.156)
C4': (108.988,102.988,101.224)
C2': (108.988,100.647,101.527)
O2': (107.608,100.358,101.411)
N1: (112.852,97.393,98.828)
N2: (110.896,96.276,98.331)
N3: (110.729,98.402,99.153)
N7: (113.201,100.765,100.231)
N9: (110.978,100.621,100.068)
O5': (109.392,105.203,100.395)
O3': (108.417,102.101,103.404)
OP2: (111.057,106.767,101.403)
C3': (109.260,101.936,102.280)
C1': (109.572,100.991,100.156)
C5': (109.688,104.295,101.459)
O6: (114.869,98.352,99.290)
O4': (109.481,102.395,99.997)
C8: (112.067,101.377,100.431)
C2: (111.478,97.389,98.780)
C6: (113.634,98.448,99.289)
C5: (112.837,99.535,99.706)
C4: (111.468,99.433,99.604)
P: (110.288,106.491,100.156)
C4': (108.988,102.988,101.224)
C2': (108.988,100.647,101.527)
O2': (107.608,100.358,101.411)
N1: (112.852,97.393,98.828)
N2: (110.896,96.276,98.331)
N3: (110.729,98.402,99.153)
N7: (113.201,100.765,100.231)
N9: (110.978,100.621,100.068)
O5': (109.392,105.203,100.395)
O3': (108.417,102.101,103.404)
Image (generated by PyMOL):