ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01917:01905

Extra

PDB:
ATOM 1 O3' G A1916 116.444 104.039 100.804 1.00 57.29 O
ATOM 2 P G A1917 117.193 105.305 101.431 1.00 57.08 P
ATOM 3 OP1 G A1917 118.627 105.260 101.042 1.00 56.38 O
ATOM 4 OP2 G A1917 116.823 105.369 102.871 1.00 54.98 O
ATOM 5 O5' G A1917 116.454 106.509 100.694 1.00 58.59 O
ATOM 6 C5' G A1917 117.177 107.448 99.890 1.00 58.38 C
ATOM 7 C4' G A1917 116.729 108.854 100.212 1.00 58.16 C
ATOM 8 O4' G A1917 115.494 109.161 99.506 1.00 57.35 O
ATOM 9 C3' G A1917 116.431 109.147 101.690 1.00 57.75 C
ATOM 10 O3' G A1917 116.867 110.473 101.955 1.00 58.11 O
ATOM 11 C2' G A1917 114.906 109.171 101.710 1.00 57.25 C
ATOM 12 O2' G A1917 114.376 109.919 102.786 1.00 59.64 O
ATOM 13 C1' G A1917 114.670 109.881 100.385 1.00 56.80 C
ATOM 14 N9 G A1917 113.325 110.005 99.836 1.00 55.41 N
ATOM 15 C8 G A1917 112.219 109.243 100.108 1.00 55.55 C
ATOM 16 N7 G A1917 111.154 109.647 99.473 1.00 55.67 N
ATOM 17 C5 G A1917 111.590 110.734 98.730 1.00 55.59 C
ATOM 18 C6 G A1917 110.883 111.584 97.846 1.00 56.42 C
ATOM 19 O6 G A1917 109.688 111.543 97.526 1.00 56.93 O
ATOM 20 N1 G A1917 111.711 112.566 97.312 1.00 56.36 N
ATOM 21 C2 G A1917 113.047 112.708 97.590 1.00 55.69 C
ATOM 22 N2 G A1917 113.679 113.723 96.983 1.00 54.98 N
ATOM 23 N3 G A1917 113.715 111.918 98.404 1.00 55.36 N
ATOM 24 C4 G A1917 112.928 110.962 98.938 1.00 55.02 C
ATOM 25 P U A1918 117.129 110.958 103.462 1.00 59.55 P
ATOM 26 OP1 U A1918 117.291 109.777 104.342 1.00 60.60 O
ATOM 27 OP2 U A1918 116.114 111.991 103.814 1.00 57.05 O
ATOM 28 O5' U A1918 118.542 111.677 103.318 1.00 59.80 O
TER

ATOM 1 O3' C B1904 111.179 105.708 99.045 1.00 70.23 O
ATOM 2 P G B1905 110.141 106.200 100.169 1.00 73.98 P
ATOM 3 OP1 G B1905 109.326 107.315 99.619 1.00 74.14 O
ATOM 4 OP2 G B1905 110.894 106.397 101.444 1.00 73.09 O
ATOM 5 O5' G B1905 109.168 104.951 100.338 1.00 76.46 O
ATOM 6 C5' G B1905 109.373 104.004 101.394 1.00 80.48 C
ATOM 7 C4' G B1905 108.713 102.690 101.062 1.00 81.93 C
ATOM 8 O4' G B1905 109.290 102.143 99.848 1.00 81.11 O
ATOM 9 C3' G B1905 108.961 101.613 102.099 1.00 83.71 C
ATOM 10 O3' G B1905 108.070 101.729 103.191 1.00 87.22 O
ATOM 11 C2' G B1905 108.768 100.339 101.298 1.00 83.37 C
ATOM 12 O2' G B1905 107.408 100.023 101.083 1.00 86.34 O
ATOM 13 C1' G B1905 109.421 100.737 99.976 1.00 81.43 C
ATOM 14 N9 G B1905 110.842 100.418 99.972 1.00 79.76 N
ATOM 15 C8 G B1905 111.866 101.178 100.480 1.00 79.05 C
ATOM 16 N7 G B1905 113.036 100.625 100.328 1.00 78.88 N
ATOM 17 C5 G B1905 112.768 99.429 99.682 1.00 78.93 C
ATOM 18 C6 G B1905 113.643 98.404 99.251 1.00 79.07 C
ATOM 19 O6 G B1905 114.872 98.346 99.354 1.00 79.28 O
ATOM 20 N1 G B1905 112.948 97.364 98.647 1.00 79.42 N
ATOM 21 C2 G B1905 111.588 97.315 98.482 1.00 79.76 C
ATOM 22 N2 G B1905 111.103 96.220 97.904 1.00 80.20 N
ATOM 23 N3 G B1905 110.764 98.268 98.867 1.00 79.87 N
ATOM 24 C4 G B1905 111.417 99.287 99.458 1.00 79.61 C
ATOM 25 P G B1906 108.490 101.128 104.613 1.00 90.19 P
ATOM 26 OP1 G B1906 107.501 101.640 105.598 1.00 90.74 O
ATOM 27 OP2 G B1906 109.940 101.374 104.831 1.00 89.94 O
ATOM 28 O5' G B1906 108.287 99.561 104.423 1.00 92.04 O
TER

Atoms:
OP1: (118.627,105.260,101.042)
OP2: (116.823,105.369,102.871)
C3': (116.431,109.147,101.690)
C1': (114.670,109.881,100.385)
C5': (117.177,107.448,99.890)
O6: (109.688,111.543,97.526)
O4': (115.494,109.161,99.506)
C8: (112.219,109.243,100.108)
C2: (113.047,112.708,97.590)
C6: (110.883,111.584,97.846)
C5: (111.590,110.734,98.730)
C4: (112.928,110.962,98.938)
P: (117.193,105.305,101.431)
C4': (116.729,108.854,100.212)
C2': (114.906,109.171,101.710)
O2': (114.376,109.919,102.786)
N1: (111.711,112.566,97.312)
N2: (113.679,113.723,96.983)
N3: (113.715,111.918,98.404)
N7: (111.154,109.647,99.473)
N9: (113.325,110.005,99.836)
O5': (116.454,106.509,100.694)
O3': (116.867,110.473,101.955)
OP1: (109.326,107.315,99.619)
OP2: (110.894,106.397,101.444)
C3': (108.961,101.613,102.099)
C1': (109.421,100.737,99.976)
C5': (109.373,104.004,101.394)
O6: (114.872,98.346,99.354)
O4': (109.290,102.143,99.848)
C8: (111.866,101.178,100.480)
C2: (111.588,97.315,98.482)
C6: (113.643,98.404,99.251)
C5: (112.768,99.429,99.682)
C4: (111.417,99.287,99.458)
P: (110.141,106.200,100.169)
C4': (108.713,102.690,101.062)
C2': (108.768,100.339,101.298)
O2': (107.408,100.023,101.083)
N1: (112.948,97.364,98.647)
N2: (111.103,96.220,97.904)
N3: (110.764,98.268,98.867)
N7: (113.036,100.625,100.328)
N9: (110.842,100.418,99.972)
O5': (109.168,104.951,100.338)
O3': (108.070,101.729,103.191)
Image (generated by PyMOL):
PyMOL image
show in jmol