ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A1846:A1822

Extra

PDB:
ATOM 1 O3' G A1845 -39.623 124.162 116.509 1.00 5.36 O
ATOM 2 P G A1846 -38.712 122.926 116.025 1.00 22.69 P
ATOM 3 OP1 G A1846 -37.365 123.415 115.596 1.00 18.13 O
ATOM 4 OP2 G A1846 -39.524 122.083 115.096 1.00 18.50 O
ATOM 5 O5' G A1846 -38.484 122.090 117.356 1.00 34.84 O
ATOM 6 C5' G A1846 -37.708 122.631 118.427 1.00 34.84 C
ATOM 7 C4' G A1846 -36.406 121.893 118.531 1.00 34.84 C
ATOM 8 O4' G A1846 -35.573 122.506 119.543 1.00 34.84 O
ATOM 9 C3' G A1846 -36.535 120.428 118.923 1.00 34.84 C
ATOM 10 O3' G A1846 -35.451 119.757 118.282 1.00 34.84 O
ATOM 11 C2' G A1846 -36.283 120.467 120.422 1.00 34.84 C
ATOM 12 O2' G A1846 -35.843 119.236 120.938 1.00 34.84 O
ATOM 13 C1' G A1846 -35.189 121.528 120.480 1.00 34.84 C
ATOM 14 N9 G A1846 -34.942 122.185 121.754 1.00 0.79 N
ATOM 15 C8 G A1846 -35.864 122.636 122.659 1.00 0.79 C
ATOM 16 N7 G A1846 -35.318 123.242 123.676 1.00 0.79 N
ATOM 17 C5 G A1846 -33.955 123.171 123.429 1.00 0.79 C
ATOM 18 C6 G A1846 -32.865 123.667 124.173 1.00 0.79 C
ATOM 19 O6 G A1846 -32.874 124.276 125.251 1.00 0.79 O
ATOM 20 N1 G A1846 -31.656 123.389 123.556 1.00 0.79 N
ATOM 21 C2 G A1846 -31.510 122.703 122.388 1.00 0.79 C
ATOM 22 N2 G A1846 -30.248 122.527 121.970 1.00 0.79 N
ATOM 23 N3 G A1846 -32.518 122.228 121.686 1.00 0.79 N
ATOM 24 C4 G A1846 -33.707 122.506 122.261 1.00 0.79 C
ATOM 25 P U A1847 -35.480 118.171 118.099 1.00 2.78 P
ATOM 26 OP1 U A1847 -36.857 117.814 117.675 1.00 23.25 O
ATOM 27 OP2 U A1847 -34.895 117.516 119.300 1.00 23.35 O
ATOM 28 O5' U A1847 -34.439 117.947 116.916 1.00 24.76 O
TER

ATOM 1 O3' C B1821 -39.821 125.066 122.289 1.00 16.99 O
ATOM 2 P G B1822 -40.048 123.474 122.322 1.00 21.57 P
ATOM 3 OP1 G B1822 -40.238 123.141 123.758 1.00 58.09 O
ATOM 4 OP2 G B1822 -38.995 122.774 121.541 1.00 58.09 O
ATOM 5 O5' G B1822 -41.445 123.342 121.564 1.00 22.24 O
ATOM 6 C5' G B1822 -42.440 122.362 121.945 1.00 22.24 C
ATOM 7 C4' G B1822 -43.656 123.039 122.565 1.00 22.24 C
ATOM 8 O4' G B1822 -44.094 124.161 121.751 1.00 22.24 O
ATOM 9 C3' G B1822 -44.906 122.178 122.689 1.00 22.24 C
ATOM 10 O3' G B1822 -44.917 121.340 123.827 1.00 22.24 O
ATOM 11 C2' G B1822 -46.017 123.207 122.779 1.00 22.24 C
ATOM 12 O2' G B1822 -46.176 123.704 124.090 1.00 22.24 O
ATOM 13 C1' G B1822 -45.505 124.294 121.837 1.00 22.24 C
ATOM 14 N9 G B1822 -46.079 124.091 120.513 1.00 24.86 N
ATOM 15 C8 G B1822 -45.464 123.563 119.408 1.00 24.86 C
ATOM 16 N7 G B1822 -46.269 123.438 118.390 1.00 24.86 N
ATOM 17 C5 G B1822 -47.479 123.931 118.849 1.00 24.86 C
ATOM 18 C6 G B1822 -48.726 124.047 118.196 1.00 24.86 C
ATOM 19 O6 G B1822 -49.027 123.722 117.045 1.00 24.86 O
ATOM 20 N1 G B1822 -49.684 124.605 119.026 1.00 24.86 N
ATOM 21 C2 G B1822 -49.467 124.997 120.319 1.00 24.86 C
ATOM 22 N2 G B1822 -50.516 125.519 120.961 1.00 24.86 N
ATOM 23 N3 G B1822 -48.311 124.889 120.938 1.00 24.86 N
ATOM 24 C4 G B1822 -47.370 124.352 120.150 1.00 24.86 C
ATOM 25 P G B1823 -45.730 119.958 123.777 1.00 44.83 P
ATOM 26 OP1 G B1823 -45.544 119.350 125.110 1.00 28.16 O
ATOM 27 OP2 G B1823 -45.303 119.208 122.570 1.00 28.16 O
ATOM 28 O5' G B1823 -47.254 120.408 123.610 1.00 67.17 O
TER

Atoms:
OP1: (-37.365,123.415,115.596)
OP2: (-39.524,122.083,115.096)
C3': (-36.535,120.428,118.923)
C1': (-35.189,121.528,120.480)
C5': (-37.708,122.631,118.427)
O6: (-32.874,124.276,125.251)
O4': (-35.573,122.506,119.543)
C8: (-35.864,122.636,122.659)
C2: (-31.510,122.703,122.388)
C6: (-32.865,123.667,124.173)
C5: (-33.955,123.171,123.429)
C4: (-33.707,122.506,122.261)
P: (-38.712,122.926,116.025)
C4': (-36.406,121.893,118.531)
C2': (-36.283,120.467,120.422)
O2': (-35.843,119.236,120.938)
N1: (-31.656,123.389,123.556)
N2: (-30.248,122.527,121.970)
N3: (-32.518,122.228,121.686)
N7: (-35.318,123.242,123.676)
N9: (-34.942,122.185,121.754)
O5': (-38.484,122.090,117.356)
O3': (-35.451,119.757,118.282)
OP1: (-40.238,123.141,123.758)
OP2: (-38.995,122.774,121.541)
C3': (-44.906,122.178,122.689)
C1': (-45.505,124.294,121.837)
C5': (-42.440,122.362,121.945)
O6: (-49.027,123.722,117.045)
O4': (-44.094,124.161,121.751)
C8: (-45.464,123.563,119.408)
C2: (-49.467,124.997,120.319)
C6: (-48.726,124.047,118.196)
C5: (-47.479,123.931,118.849)
C4: (-47.370,124.352,120.150)
P: (-40.048,123.474,122.322)
C4': (-43.656,123.039,122.565)
C2': (-46.017,123.207,122.779)
O2': (-46.176,123.704,124.090)
N1: (-49.684,124.605,119.026)
N2: (-50.516,125.519,120.961)
N3: (-48.311,124.889,120.938)
N7: (-46.269,123.438,118.390)
N9: (-46.079,124.091,120.513)
O5': (-41.445,123.342,121.564)
O3': (-44.917,121.340,123.827)
Image (generated by PyMOL):
PyMOL image
show in jmol