ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A2455:A1968

Extra

PDB:
ATOM 1 O3' A A2454 -70.011 -65.712 -4.156 1.00 0.79 O
ATOM 2 P G A2455 -69.838 -66.246 -5.638 1.00 16.50 P
ATOM 3 OP1 G A2455 -69.557 -67.693 -5.497 1.00 16.50 O
ATOM 4 OP2 G A2455 -68.865 -65.378 -6.336 1.00 16.50 O
ATOM 5 O5' G A2455 -71.286 -66.001 -6.260 1.00 5.35 O
ATOM 6 C5' G A2455 -71.868 -64.674 -6.236 1.00 5.35 C
ATOM 7 C4' G A2455 -71.381 -63.893 -7.425 1.00 5.35 C
ATOM 8 O4' G A2455 -72.276 -64.123 -8.538 1.00 5.35 O
ATOM 9 C3' G A2455 -71.325 -62.381 -7.352 1.00 5.35 C
ATOM 10 O3' G A2455 -70.167 -61.936 -6.649 1.00 5.35 O
ATOM 11 C2' G A2455 -71.244 -62.031 -8.832 1.00 5.35 C
ATOM 12 O2' G A2455 -69.954 -62.354 -9.334 1.00 5.35 O
ATOM 13 C1' G A2455 -72.212 -63.039 -9.437 1.00 5.35 C
ATOM 14 N9 G A2455 -73.555 -62.510 -9.613 1.00 0.79 N
ATOM 15 C8 G A2455 -74.721 -63.018 -9.102 1.00 0.79 C
ATOM 16 N7 G A2455 -75.766 -62.303 -9.403 1.00 0.79 N
ATOM 17 C5 G A2455 -75.257 -61.259 -10.161 1.00 0.79 C
ATOM 18 C6 G A2455 -75.910 -60.140 -10.754 1.00 0.79 C
ATOM 19 O6 G A2455 -77.104 -59.819 -10.693 1.00 0.79 O
ATOM 20 N1 G A2455 -75.021 -59.345 -11.457 1.00 0.79 N
ATOM 21 C2 G A2455 -73.681 -59.579 -11.561 1.00 0.79 C
ATOM 22 N2 G A2455 -72.993 -58.700 -12.281 1.00 0.79 N
ATOM 23 N3 G A2455 -73.054 -60.599 -10.998 1.00 0.79 N
ATOM 24 C4 G A2455 -73.898 -61.390 -10.318 1.00 0.79 C
ATOM 25 P C A2456 -70.267 -60.660 -5.663 1.00 0.79 P
ATOM 26 OP1 C A2456 -69.145 -60.783 -4.703 1.00 0.79 O
ATOM 27 OP2 C A2456 -71.650 -60.481 -5.165 1.00 0.79 O
ATOM 28 O5' C A2456 -69.973 -59.434 -6.616 1.00 0.79 O
TER

ATOM 1 O3' A B1967 -74.755 -67.979 -8.911 1.00 1.23 O
ATOM 2 P G B1968 -75.979 -66.989 -8.684 1.00 0.79 P
ATOM 3 OP1 G B1968 -76.205 -66.327 -10.001 1.00 4.17 O
ATOM 4 OP2 G B1968 -75.735 -66.184 -7.454 1.00 4.17 O
ATOM 5 O5' G B1968 -77.221 -67.922 -8.399 1.00 0.92 O
ATOM 6 C5' G B1968 -78.528 -67.483 -8.701 1.00 0.92 C
ATOM 7 C4' G B1968 -79.500 -68.611 -8.506 1.00 0.92 C
ATOM 8 O4' G B1968 -79.132 -69.743 -9.341 1.00 0.92 O
ATOM 9 C3' G B1968 -79.560 -69.203 -7.110 1.00 0.92 C
ATOM 10 O3' G B1968 -80.375 -68.430 -6.259 1.00 0.92 O
ATOM 11 C2' G B1968 -80.155 -70.580 -7.375 1.00 0.92 C
ATOM 12 O2' G B1968 -81.552 -70.508 -7.580 1.00 0.92 O
ATOM 13 C1' G B1968 -79.463 -70.957 -8.681 1.00 0.92 C
ATOM 14 N9 G B1968 -78.226 -71.656 -8.374 1.00 3.64 N
ATOM 15 C8 G B1968 -76.945 -71.176 -8.475 1.00 3.64 C
ATOM 16 N7 G B1968 -76.048 -72.014 -8.036 1.00 3.64 N
ATOM 17 C5 G B1968 -76.782 -73.119 -7.643 1.00 3.64 C
ATOM 18 C6 G B1968 -76.361 -74.334 -7.079 1.00 3.64 C
ATOM 19 O6 G B1968 -75.224 -74.684 -6.804 1.00 3.64 O
ATOM 20 N1 G B1968 -77.430 -75.183 -6.831 1.00 3.64 N
ATOM 21 C2 G B1968 -78.743 -74.888 -7.096 1.00 3.64 C
ATOM 22 N2 G B1968 -79.647 -75.827 -6.788 1.00 3.64 N
ATOM 23 N3 G B1968 -79.151 -73.749 -7.626 1.00 3.64 N
ATOM 24 C4 G B1968 -78.125 -72.918 -7.869 1.00 3.64 C
ATOM 25 P G B1969 -80.184 -68.542 -4.678 1.00 3.54 P
ATOM 26 OP1 G B1969 -81.233 -67.678 -4.076 1.00 11.89 O
ATOM 27 OP2 G B1969 -78.751 -68.312 -4.353 1.00 11.89 O
ATOM 28 O5' G B1969 -80.593 -70.040 -4.326 1.00 1.96 O
TER

Atoms:
OP1: (-69.557,-67.693,-5.497)
OP2: (-68.865,-65.378,-6.336)
C3': (-71.325,-62.381,-7.352)
C1': (-72.212,-63.039,-9.437)
C5': (-71.868,-64.674,-6.236)
O6: (-77.104,-59.819,-10.693)
O4': (-72.276,-64.123,-8.538)
C8: (-74.721,-63.018,-9.102)
C2: (-73.681,-59.579,-11.561)
C6: (-75.910,-60.140,-10.754)
C5: (-75.257,-61.259,-10.161)
C4: (-73.898,-61.390,-10.318)
P: (-69.838,-66.246,-5.638)
C4': (-71.381,-63.893,-7.425)
C2': (-71.244,-62.031,-8.832)
O2': (-69.954,-62.354,-9.334)
N1: (-75.021,-59.345,-11.457)
N2: (-72.993,-58.700,-12.281)
N3: (-73.054,-60.599,-10.998)
N7: (-75.766,-62.303,-9.403)
N9: (-73.555,-62.510,-9.613)
O5': (-71.286,-66.001,-6.260)
O3': (-70.167,-61.936,-6.649)
OP1: (-76.205,-66.327,-10.001)
OP2: (-75.735,-66.184,-7.454)
C3': (-79.560,-69.203,-7.110)
C1': (-79.463,-70.957,-8.681)
C5': (-78.528,-67.483,-8.701)
O6: (-75.224,-74.684,-6.804)
O4': (-79.132,-69.743,-9.341)
C8: (-76.945,-71.176,-8.475)
C2: (-78.743,-74.888,-7.096)
C6: (-76.361,-74.334,-7.079)
C5: (-76.782,-73.119,-7.643)
C4: (-78.125,-72.918,-7.869)
P: (-75.979,-66.989,-8.684)
C4': (-79.500,-68.611,-8.506)
C2': (-80.155,-70.580,-7.375)
O2': (-81.552,-70.508,-7.580)
N1: (-77.430,-75.183,-6.831)
N2: (-79.647,-75.827,-6.788)
N3: (-79.151,-73.749,-7.626)
N7: (-76.048,-72.014,-8.036)
N9: (-78.226,-71.656,-8.374)
O5': (-77.221,-67.922,-8.399)
O3': (-80.375,-68.430,-6.259)
Image (generated by PyMOL):
PyMOL image
show in jmol