Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DUQ:D8:D9
Extra
PDB:
ATOM 1 O3' G A 7 -2.705 14.674 5.345 1.00 64.63 O
ATOM 2 P U A 8 -2.078 16.172 5.462 1.00 63.62 P
ATOM 3 OP1 U A 8 -1.201 16.346 6.649 1.00 61.05 O
ATOM 4 OP2 U A 8 -3.224 17.088 5.265 1.00 50.18 O
ATOM 5 O5' U A 8 -1.130 16.289 4.188 1.00 47.62 O
ATOM 6 C5' U A 8 -1.098 15.278 3.171 1.00 55.49 C
ATOM 7 C4' U A 8 0.335 14.981 2.796 1.00 52.38 C
ATOM 8 O4' U A 8 0.929 16.146 2.188 1.00 60.47 O
ATOM 9 C3' U A 8 1.177 14.647 4.007 1.00 52.13 C
ATOM 10 O3' U A 8 1.125 13.228 4.263 1.00 67.03 O
ATOM 11 C2' U A 8 2.525 15.353 3.814 1.00 56.80 C
ATOM 12 O2' U A 8 3.653 14.556 3.547 1.00 72.20 O
ATOM 13 C1' U A 8 2.251 16.312 2.650 1.00 60.27 C
ATOM 14 N1 U A 8 2.492 17.743 2.884 1.00 60.19 N
ATOM 15 C2 U A 8 3.743 18.221 2.587 1.00 63.50 C
ATOM 16 O2 U A 8 4.632 17.493 2.181 1.00 69.11 O
ATOM 17 N3 U A 8 3.918 19.578 2.781 1.00 59.29 N
ATOM 18 C4 U A 8 2.978 20.475 3.240 1.00 52.02 C
ATOM 19 O4 U A 8 3.265 21.661 3.340 1.00 48.37 O
ATOM 20 C5 U A 8 1.709 19.897 3.540 1.00 61.75 C
ATOM 21 C6 U A 8 1.514 18.580 3.357 1.00 68.50 C
ATOM 22 P A A 9 1.905 12.143 3.314 1.00 55.25 P
ATOM 23 OP1 A A 9 3.085 12.659 2.598 1.00 65.14 O
ATOM 24 OP2 A A 9 0.871 11.419 2.544 1.00 53.50 O
ATOM 25 O5' A A 9 2.552 11.227 4.431 1.00 53.04 O
TER
ATOM 1 O3' U B 8 1.125 13.228 4.263 1.00 67.03 O
ATOM 2 P A B 9 1.905 12.143 3.314 1.00 55.25 P
ATOM 3 OP1 A B 9 3.085 12.659 2.598 1.00 65.14 O
ATOM 4 OP2 A B 9 0.871 11.419 2.544 1.00 53.50 O
ATOM 5 O5' A B 9 2.552 11.227 4.431 1.00 53.04 O
ATOM 6 C5' A B 9 3.552 11.786 5.281 1.00 64.25 C
ATOM 7 C4' A B 9 3.767 10.929 6.499 1.00 65.13 C
ATOM 8 O4' A B 9 2.670 11.068 7.434 1.00 66.09 O
ATOM 9 C3' A B 9 3.842 9.444 6.222 1.00 59.31 C
ATOM 10 O3' A B 9 5.142 9.123 5.776 1.00 54.94 O
ATOM 11 C2' A B 9 3.536 8.855 7.590 1.00 57.43 C
ATOM 12 O2' A B 9 4.670 8.782 8.428 1.00 55.14 O
ATOM 13 C1' A B 9 2.494 9.845 8.126 1.00 56.66 C
ATOM 14 N9 A B 9 1.146 9.376 7.846 1.00 52.59 N
ATOM 15 C8 A B 9 0.281 9.806 6.876 1.00 54.16 C
ATOM 16 N7 A B 9 -0.844 9.135 6.840 1.00 52.80 N
ATOM 17 C5 A B 9 -0.714 8.218 7.870 1.00 43.45 C
ATOM 18 C6 A B 9 -1.556 7.215 8.341 1.00 46.52 C
ATOM 19 N6 A B 9 -2.768 6.978 7.832 1.00 34.56 N
ATOM 20 N1 A B 9 -1.116 6.453 9.372 1.00 39.88 N
ATOM 21 C2 A B 9 0.091 6.713 9.891 1.00 51.59 C
ATOM 22 N3 A B 9 0.973 7.642 9.534 1.00 39.14 N
ATOM 23 C4 A B 9 0.503 8.363 8.504 1.00 48.38 C
ATOM 24 P C B 10 5.384 7.780 4.942 1.00 56.70 P
ATOM 25 OP1 C B 10 6.359 8.075 3.863 1.00 65.81 O
ATOM 26 OP2 C B 10 4.034 7.260 4.604 1.00 51.18 O
ATOM 27 O5' C B 10 6.128 6.832 5.979 1.00 44.51 O
TER
ATOM 2 P U A 8 -2.078 16.172 5.462 1.00 63.62 P
ATOM 3 OP1 U A 8 -1.201 16.346 6.649 1.00 61.05 O
ATOM 4 OP2 U A 8 -3.224 17.088 5.265 1.00 50.18 O
ATOM 5 O5' U A 8 -1.130 16.289 4.188 1.00 47.62 O
ATOM 6 C5' U A 8 -1.098 15.278 3.171 1.00 55.49 C
ATOM 7 C4' U A 8 0.335 14.981 2.796 1.00 52.38 C
ATOM 8 O4' U A 8 0.929 16.146 2.188 1.00 60.47 O
ATOM 9 C3' U A 8 1.177 14.647 4.007 1.00 52.13 C
ATOM 10 O3' U A 8 1.125 13.228 4.263 1.00 67.03 O
ATOM 11 C2' U A 8 2.525 15.353 3.814 1.00 56.80 C
ATOM 12 O2' U A 8 3.653 14.556 3.547 1.00 72.20 O
ATOM 13 C1' U A 8 2.251 16.312 2.650 1.00 60.27 C
ATOM 14 N1 U A 8 2.492 17.743 2.884 1.00 60.19 N
ATOM 15 C2 U A 8 3.743 18.221 2.587 1.00 63.50 C
ATOM 16 O2 U A 8 4.632 17.493 2.181 1.00 69.11 O
ATOM 17 N3 U A 8 3.918 19.578 2.781 1.00 59.29 N
ATOM 18 C4 U A 8 2.978 20.475 3.240 1.00 52.02 C
ATOM 19 O4 U A 8 3.265 21.661 3.340 1.00 48.37 O
ATOM 20 C5 U A 8 1.709 19.897 3.540 1.00 61.75 C
ATOM 21 C6 U A 8 1.514 18.580 3.357 1.00 68.50 C
ATOM 22 P A A 9 1.905 12.143 3.314 1.00 55.25 P
ATOM 23 OP1 A A 9 3.085 12.659 2.598 1.00 65.14 O
ATOM 24 OP2 A A 9 0.871 11.419 2.544 1.00 53.50 O
ATOM 25 O5' A A 9 2.552 11.227 4.431 1.00 53.04 O
TER
ATOM 1 O3' U B 8 1.125 13.228 4.263 1.00 67.03 O
ATOM 2 P A B 9 1.905 12.143 3.314 1.00 55.25 P
ATOM 3 OP1 A B 9 3.085 12.659 2.598 1.00 65.14 O
ATOM 4 OP2 A B 9 0.871 11.419 2.544 1.00 53.50 O
ATOM 5 O5' A B 9 2.552 11.227 4.431 1.00 53.04 O
ATOM 6 C5' A B 9 3.552 11.786 5.281 1.00 64.25 C
ATOM 7 C4' A B 9 3.767 10.929 6.499 1.00 65.13 C
ATOM 8 O4' A B 9 2.670 11.068 7.434 1.00 66.09 O
ATOM 9 C3' A B 9 3.842 9.444 6.222 1.00 59.31 C
ATOM 10 O3' A B 9 5.142 9.123 5.776 1.00 54.94 O
ATOM 11 C2' A B 9 3.536 8.855 7.590 1.00 57.43 C
ATOM 12 O2' A B 9 4.670 8.782 8.428 1.00 55.14 O
ATOM 13 C1' A B 9 2.494 9.845 8.126 1.00 56.66 C
ATOM 14 N9 A B 9 1.146 9.376 7.846 1.00 52.59 N
ATOM 15 C8 A B 9 0.281 9.806 6.876 1.00 54.16 C
ATOM 16 N7 A B 9 -0.844 9.135 6.840 1.00 52.80 N
ATOM 17 C5 A B 9 -0.714 8.218 7.870 1.00 43.45 C
ATOM 18 C6 A B 9 -1.556 7.215 8.341 1.00 46.52 C
ATOM 19 N6 A B 9 -2.768 6.978 7.832 1.00 34.56 N
ATOM 20 N1 A B 9 -1.116 6.453 9.372 1.00 39.88 N
ATOM 21 C2 A B 9 0.091 6.713 9.891 1.00 51.59 C
ATOM 22 N3 A B 9 0.973 7.642 9.534 1.00 39.14 N
ATOM 23 C4 A B 9 0.503 8.363 8.504 1.00 48.38 C
ATOM 24 P C B 10 5.384 7.780 4.942 1.00 56.70 P
ATOM 25 OP1 C B 10 6.359 8.075 3.863 1.00 65.81 O
ATOM 26 OP2 C B 10 4.034 7.260 4.604 1.00 51.18 O
ATOM 27 O5' C B 10 6.128 6.832 5.979 1.00 44.51 O
TER
Atoms:
C4: (2.978,20.475,3.240)
N3: (3.918,19.578,2.781)
OP1: (-1.201,16.346,6.649)
OP2: (-3.224,17.088,5.265)
C2: (3.743,18.221,2.587)
C1': (2.251,16.312,2.650)
C3': (1.177,14.647,4.007)
O5': (-1.130,16.289,4.188)
O4': (0.929,16.146,2.188)
C5': (-1.098,15.278,3.171)
P: (-2.078,16.172,5.462)
C4': (0.335,14.981,2.796)
C2': (2.525,15.353,3.814)
O2': (3.653,14.556,3.547)
N1: (2.492,17.743,2.884)
O4: (3.265,21.661,3.340)
O2: (4.632,17.493,2.181)
C6: (1.514,18.580,3.357)
C5: (1.709,19.897,3.540)
O3': (1.125,13.228,4.263)
N3: (3.918,19.578,2.781)
OP1: (-1.201,16.346,6.649)
OP2: (-3.224,17.088,5.265)
C2: (3.743,18.221,2.587)
C1': (2.251,16.312,2.650)
C3': (1.177,14.647,4.007)
O5': (-1.130,16.289,4.188)
O4': (0.929,16.146,2.188)
C5': (-1.098,15.278,3.171)
P: (-2.078,16.172,5.462)
C4': (0.335,14.981,2.796)
C2': (2.525,15.353,3.814)
O2': (3.653,14.556,3.547)
N1: (2.492,17.743,2.884)
O4: (3.265,21.661,3.340)
O2: (4.632,17.493,2.181)
C6: (1.514,18.580,3.357)
C5: (1.709,19.897,3.540)
O3': (1.125,13.228,4.263)
OP1: (3.085,12.659,2.598)
OP2: (0.871,11.419,2.544)
C3': (3.842,9.444,6.222)
C1': (2.494,9.845,8.126)
C5': (3.552,11.786,5.281)
O4': (2.670,11.068,7.434)
C8: (0.281,9.806,6.876)
O2': (4.670,8.782,8.428)
C6: (-1.556,7.215,8.341)
C5: (-0.714,8.218,7.870)
C4: (0.503,8.363,8.504)
P: (1.905,12.143,3.314)
C4': (3.767,10.929,6.499)
C2': (3.536,8.855,7.590)
C2: (0.091,6.713,9.891)
N1: (-1.116,6.453,9.372)
N3: (0.973,7.642,9.534)
N6: (-2.768,6.978,7.832)
N7: (-0.844,9.135,6.840)
N9: (1.146,9.376,7.846)
O5': (2.552,11.227,4.431)
O3': (5.142,9.123,5.776)
OP2: (0.871,11.419,2.544)
C3': (3.842,9.444,6.222)
C1': (2.494,9.845,8.126)
C5': (3.552,11.786,5.281)
O4': (2.670,11.068,7.434)
C8: (0.281,9.806,6.876)
O2': (4.670,8.782,8.428)
C6: (-1.556,7.215,8.341)
C5: (-0.714,8.218,7.870)
C4: (0.503,8.363,8.504)
P: (1.905,12.143,3.314)
C4': (3.767,10.929,6.499)
C2': (3.536,8.855,7.590)
C2: (0.091,6.713,9.891)
N1: (-1.116,6.453,9.372)
N3: (0.973,7.642,9.534)
N6: (-2.768,6.978,7.832)
N7: (-0.844,9.135,6.840)
N9: (1.146,9.376,7.846)
O5': (2.552,11.227,4.431)
O3': (5.142,9.123,5.776)
Image (generated by PyMOL):