Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0188:0189
Extra
PDB:
ATOM 1 O3' A A 187 66.359 78.794 15.730 1.00 69.63 O
ATOM 2 P C A 188 67.536 78.616 14.650 1.00 72.37 P
ATOM 3 OP1 C A 188 67.957 77.188 14.692 1.00 73.52 O
ATOM 4 OP2 C A 188 68.564 79.685 14.815 1.00 72.93 O
ATOM 5 O5' C A 188 66.762 78.838 13.276 1.00 71.72 O
ATOM 6 C5' C A 188 67.188 79.831 12.345 1.00 73.29 C
ATOM 7 C4' C A 188 66.016 80.307 11.524 1.00 74.32 C
ATOM 8 O4' C A 188 65.411 79.156 10.860 1.00 77.31 O
ATOM 9 C3' C A 188 64.883 81.011 12.274 1.00 72.82 C
ATOM 10 O3' C A 188 64.312 82.009 11.446 1.00 67.63 O
ATOM 11 C2' C A 188 63.843 79.911 12.430 1.00 76.02 C
ATOM 12 O2' C A 188 62.520 80.412 12.523 1.00 75.61 O
ATOM 13 C1' C A 188 64.024 79.143 11.123 1.00 79.30 C
ATOM 14 N1 C A 188 63.540 77.746 11.160 1.00 84.06 N
ATOM 15 C2 C A 188 62.732 77.290 10.101 1.00 86.39 C
ATOM 16 O2 C A 188 62.515 78.046 9.126 1.00 86.62 O
ATOM 17 N3 C A 188 62.214 76.037 10.162 1.00 88.21 N
ATOM 18 C4 C A 188 62.481 75.250 11.211 1.00 88.06 C
ATOM 19 N4 C A 188 61.920 74.035 11.236 1.00 89.74 N
ATOM 20 C5 C A 188 63.330 75.674 12.278 1.00 86.55 C
ATOM 21 C6 C A 188 63.835 76.915 12.212 1.00 85.09 C
ATOM 22 P G A 189 64.438 83.549 11.860 1.00 64.24 P
ATOM 23 OP1 G A 189 63.549 84.347 10.957 1.00 63.39 O
ATOM 24 OP2 G A 189 65.897 83.861 11.939 1.00 64.36 O
ATOM 25 O5' G A 189 63.841 83.631 13.335 1.00 61.09 O
TER
ATOM 1 O3' C B 188 64.312 82.009 11.446 1.00 67.63 O
ATOM 2 P G B 189 64.438 83.549 11.860 1.00 64.24 P
ATOM 3 OP1 G B 189 63.549 84.347 10.957 1.00 63.39 O
ATOM 4 OP2 G B 189 65.897 83.861 11.939 1.00 64.36 O
ATOM 5 O5' G B 189 63.841 83.631 13.335 1.00 61.09 O
ATOM 6 C5' G B 189 62.418 83.701 13.569 1.00 54.62 C
ATOM 7 C4' G B 189 62.139 84.322 14.922 1.00 50.69 C
ATOM 8 O4' G B 189 63.085 83.781 15.889 1.00 48.77 O
ATOM 9 C3' G B 189 62.375 85.816 15.035 1.00 48.66 C
ATOM 10 O3' G B 189 61.274 86.558 14.542 1.00 47.01 O
ATOM 11 C2' G B 189 62.559 85.994 16.533 1.00 47.50 C
ATOM 12 O2' G B 189 61.330 85.906 17.226 1.00 44.44 O
ATOM 13 C1' G B 189 63.404 84.767 16.857 1.00 46.23 C
ATOM 14 N9 G B 189 64.843 85.034 16.803 1.00 45.93 N
ATOM 15 C8 G B 189 65.785 84.430 15.999 1.00 46.67 C
ATOM 16 N7 G B 189 67.004 84.848 16.234 1.00 45.70 N
ATOM 17 C5 G B 189 66.853 85.792 17.242 1.00 45.01 C
ATOM 18 C6 G B 189 67.820 86.560 17.931 1.00 45.12 C
ATOM 19 O6 G B 189 69.049 86.542 17.805 1.00 48.39 O
ATOM 20 N1 G B 189 67.233 87.401 18.874 1.00 43.48 N
ATOM 21 C2 G B 189 65.889 87.478 19.135 1.00 43.88 C
ATOM 22 N2 G B 189 65.517 88.346 20.088 1.00 43.77 N
ATOM 23 N3 G B 189 64.977 86.754 18.513 1.00 44.13 N
ATOM 24 C4 G B 189 65.524 85.936 17.588 1.00 45.24 C
ATOM 25 P U B 190 61.537 87.961 13.819 1.00 47.66 P
ATOM 26 OP1 U B 190 60.290 88.350 13.119 1.00 46.44 O
ATOM 27 OP2 U B 190 62.815 87.843 13.052 1.00 44.47 O
ATOM 28 O5' U B 190 61.789 88.969 15.030 1.00 49.37 O
TER
ATOM 2 P C A 188 67.536 78.616 14.650 1.00 72.37 P
ATOM 3 OP1 C A 188 67.957 77.188 14.692 1.00 73.52 O
ATOM 4 OP2 C A 188 68.564 79.685 14.815 1.00 72.93 O
ATOM 5 O5' C A 188 66.762 78.838 13.276 1.00 71.72 O
ATOM 6 C5' C A 188 67.188 79.831 12.345 1.00 73.29 C
ATOM 7 C4' C A 188 66.016 80.307 11.524 1.00 74.32 C
ATOM 8 O4' C A 188 65.411 79.156 10.860 1.00 77.31 O
ATOM 9 C3' C A 188 64.883 81.011 12.274 1.00 72.82 C
ATOM 10 O3' C A 188 64.312 82.009 11.446 1.00 67.63 O
ATOM 11 C2' C A 188 63.843 79.911 12.430 1.00 76.02 C
ATOM 12 O2' C A 188 62.520 80.412 12.523 1.00 75.61 O
ATOM 13 C1' C A 188 64.024 79.143 11.123 1.00 79.30 C
ATOM 14 N1 C A 188 63.540 77.746 11.160 1.00 84.06 N
ATOM 15 C2 C A 188 62.732 77.290 10.101 1.00 86.39 C
ATOM 16 O2 C A 188 62.515 78.046 9.126 1.00 86.62 O
ATOM 17 N3 C A 188 62.214 76.037 10.162 1.00 88.21 N
ATOM 18 C4 C A 188 62.481 75.250 11.211 1.00 88.06 C
ATOM 19 N4 C A 188 61.920 74.035 11.236 1.00 89.74 N
ATOM 20 C5 C A 188 63.330 75.674 12.278 1.00 86.55 C
ATOM 21 C6 C A 188 63.835 76.915 12.212 1.00 85.09 C
ATOM 22 P G A 189 64.438 83.549 11.860 1.00 64.24 P
ATOM 23 OP1 G A 189 63.549 84.347 10.957 1.00 63.39 O
ATOM 24 OP2 G A 189 65.897 83.861 11.939 1.00 64.36 O
ATOM 25 O5' G A 189 63.841 83.631 13.335 1.00 61.09 O
TER
ATOM 1 O3' C B 188 64.312 82.009 11.446 1.00 67.63 O
ATOM 2 P G B 189 64.438 83.549 11.860 1.00 64.24 P
ATOM 3 OP1 G B 189 63.549 84.347 10.957 1.00 63.39 O
ATOM 4 OP2 G B 189 65.897 83.861 11.939 1.00 64.36 O
ATOM 5 O5' G B 189 63.841 83.631 13.335 1.00 61.09 O
ATOM 6 C5' G B 189 62.418 83.701 13.569 1.00 54.62 C
ATOM 7 C4' G B 189 62.139 84.322 14.922 1.00 50.69 C
ATOM 8 O4' G B 189 63.085 83.781 15.889 1.00 48.77 O
ATOM 9 C3' G B 189 62.375 85.816 15.035 1.00 48.66 C
ATOM 10 O3' G B 189 61.274 86.558 14.542 1.00 47.01 O
ATOM 11 C2' G B 189 62.559 85.994 16.533 1.00 47.50 C
ATOM 12 O2' G B 189 61.330 85.906 17.226 1.00 44.44 O
ATOM 13 C1' G B 189 63.404 84.767 16.857 1.00 46.23 C
ATOM 14 N9 G B 189 64.843 85.034 16.803 1.00 45.93 N
ATOM 15 C8 G B 189 65.785 84.430 15.999 1.00 46.67 C
ATOM 16 N7 G B 189 67.004 84.848 16.234 1.00 45.70 N
ATOM 17 C5 G B 189 66.853 85.792 17.242 1.00 45.01 C
ATOM 18 C6 G B 189 67.820 86.560 17.931 1.00 45.12 C
ATOM 19 O6 G B 189 69.049 86.542 17.805 1.00 48.39 O
ATOM 20 N1 G B 189 67.233 87.401 18.874 1.00 43.48 N
ATOM 21 C2 G B 189 65.889 87.478 19.135 1.00 43.88 C
ATOM 22 N2 G B 189 65.517 88.346 20.088 1.00 43.77 N
ATOM 23 N3 G B 189 64.977 86.754 18.513 1.00 44.13 N
ATOM 24 C4 G B 189 65.524 85.936 17.588 1.00 45.24 C
ATOM 25 P U B 190 61.537 87.961 13.819 1.00 47.66 P
ATOM 26 OP1 U B 190 60.290 88.350 13.119 1.00 46.44 O
ATOM 27 OP2 U B 190 62.815 87.843 13.052 1.00 44.47 O
ATOM 28 O5' U B 190 61.789 88.969 15.030 1.00 49.37 O
TER
Atoms:
C2: (62.732,77.290,10.101)
OP1: (67.957,77.188,14.692)
OP2: (68.564,79.685,14.815)
C4: (62.481,75.250,11.211)
O5': (66.762,78.838,13.276)
C3': (64.883,81.011,12.274)
C1': (64.024,79.143,11.123)
O4': (65.411,79.156,10.860)
C5': (67.188,79.831,12.345)
P: (67.536,78.616,14.650)
O2: (62.515,78.046,9.126)
C4': (66.016,80.307,11.524)
C2': (63.843,79.911,12.430)
O2': (62.520,80.412,12.523)
N1: (63.540,77.746,11.160)
N3: (62.214,76.037,10.162)
N4: (61.920,74.035,11.236)
C6: (63.835,76.915,12.212)
C5: (63.330,75.674,12.278)
O3': (64.312,82.009,11.446)
OP1: (67.957,77.188,14.692)
OP2: (68.564,79.685,14.815)
C4: (62.481,75.250,11.211)
O5': (66.762,78.838,13.276)
C3': (64.883,81.011,12.274)
C1': (64.024,79.143,11.123)
O4': (65.411,79.156,10.860)
C5': (67.188,79.831,12.345)
P: (67.536,78.616,14.650)
O2: (62.515,78.046,9.126)
C4': (66.016,80.307,11.524)
C2': (63.843,79.911,12.430)
O2': (62.520,80.412,12.523)
N1: (63.540,77.746,11.160)
N3: (62.214,76.037,10.162)
N4: (61.920,74.035,11.236)
C6: (63.835,76.915,12.212)
C5: (63.330,75.674,12.278)
O3': (64.312,82.009,11.446)
OP1: (63.549,84.347,10.957)
OP2: (65.897,83.861,11.939)
C3': (62.375,85.816,15.035)
C1': (63.404,84.767,16.857)
C5': (62.418,83.701,13.569)
O6: (69.049,86.542,17.805)
O4': (63.085,83.781,15.889)
C8: (65.785,84.430,15.999)
C2: (65.889,87.478,19.135)
C6: (67.820,86.560,17.931)
C5: (66.853,85.792,17.242)
C4: (65.524,85.936,17.588)
P: (64.438,83.549,11.860)
C4': (62.139,84.322,14.922)
C2': (62.559,85.994,16.533)
O2': (61.330,85.906,17.226)
N1: (67.233,87.401,18.874)
N2: (65.517,88.346,20.088)
N3: (64.977,86.754,18.513)
N7: (67.004,84.848,16.234)
N9: (64.843,85.034,16.803)
O5': (63.841,83.631,13.335)
O3': (61.274,86.558,14.542)
OP2: (65.897,83.861,11.939)
C3': (62.375,85.816,15.035)
C1': (63.404,84.767,16.857)
C5': (62.418,83.701,13.569)
O6: (69.049,86.542,17.805)
O4': (63.085,83.781,15.889)
C8: (65.785,84.430,15.999)
C2: (65.889,87.478,19.135)
C6: (67.820,86.560,17.931)
C5: (66.853,85.792,17.242)
C4: (65.524,85.936,17.588)
P: (64.438,83.549,11.860)
C4': (62.139,84.322,14.922)
C2': (62.559,85.994,16.533)
O2': (61.330,85.906,17.226)
N1: (67.233,87.401,18.874)
N2: (65.517,88.346,20.088)
N3: (64.977,86.754,18.513)
N7: (67.004,84.848,16.234)
N9: (64.843,85.034,16.803)
O5': (63.841,83.631,13.335)
O3': (61.274,86.558,14.542)
Image (generated by PyMOL):