Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1421:A1422
Extra
PDB:
ATOM 1 O3' A A1420 -20.569 -13.896 27.837 1.00 0.14 O
ATOM 2 P C A1421 -20.403 -13.622 26.249 1.00 4.06 P
ATOM 3 OP1 C A1421 -19.167 -14.319 25.793 1.00 4.06 O
ATOM 4 OP2 C A1421 -20.510 -12.160 26.047 1.00 4.06 O
ATOM 5 O5' C A1421 -21.684 -14.333 25.643 1.00 4.06 O
ATOM 6 C5' C A1421 -21.671 -14.878 24.332 1.00 4.06 C
ATOM 7 C4' C A1421 -22.538 -16.116 24.228 1.00 4.06 C
ATOM 8 O4' C A1421 -22.577 -16.803 25.520 1.00 4.06 O
ATOM 9 C3' C A1421 -24.003 -15.882 23.827 1.00 4.06 C
ATOM 10 O3' C A1421 -24.380 -16.869 22.868 1.00 4.06 O
ATOM 11 C2' C A1421 -24.768 -16.108 25.143 1.00 4.06 C
ATOM 12 O2' C A1421 -26.100 -16.538 24.994 1.00 4.06 O
ATOM 13 C1' C A1421 -23.913 -17.182 25.788 1.00 4.06 C
ATOM 14 N1 C A1421 -24.101 -17.356 27.248 1.00 3.82 N
ATOM 15 C2 C A1421 -23.636 -18.569 27.777 1.00 3.82 C
ATOM 16 O2 C A1421 -23.085 -19.401 27.028 1.00 3.82 O
ATOM 17 N3 C A1421 -23.781 -18.817 29.102 1.00 3.82 N
ATOM 18 C4 C A1421 -24.402 -17.935 29.889 1.00 3.82 C
ATOM 19 N4 C A1421 -24.507 -18.258 31.181 1.00 3.82 N
ATOM 20 C5 C A1421 -24.897 -16.696 29.371 1.00 3.82 C
ATOM 21 C6 C A1421 -24.733 -16.454 28.054 1.00 3.82 C
ATOM 22 P G A1422 -24.364 -16.523 21.293 1.00 0.01 P
ATOM 23 OP1 G A1422 -23.894 -17.724 20.579 1.00 0.01 O
ATOM 24 OP2 G A1422 -23.606 -15.266 21.129 1.00 0.01 O
ATOM 25 O5' G A1422 -25.907 -16.262 20.987 1.00 0.01 O
TER
ATOM 1 O3' C B1421 -24.380 -16.869 22.868 1.00 4.06 O
ATOM 2 P G B1422 -24.364 -16.523 21.293 1.00 0.01 P
ATOM 3 OP1 G B1422 -23.894 -17.724 20.579 1.00 0.01 O
ATOM 4 OP2 G B1422 -23.606 -15.266 21.129 1.00 0.01 O
ATOM 5 O5' G B1422 -25.907 -16.262 20.987 1.00 0.01 O
ATOM 6 C5' G B1422 -26.918 -17.125 21.492 1.00 0.01 C
ATOM 7 C4' G B1422 -28.206 -16.959 20.728 1.00 0.01 C
ATOM 8 O4' G B1422 -28.835 -15.725 21.124 1.00 0.01 O
ATOM 9 C3' G B1422 -28.069 -16.868 19.215 1.00 0.01 C
ATOM 10 O3' G B1422 -28.056 -18.144 18.598 1.00 0.01 O
ATOM 11 C2' G B1422 -29.250 -16.013 18.822 1.00 0.01 C
ATOM 12 O2' G B1422 -30.424 -16.777 18.775 1.00 0.01 O
ATOM 13 C1' G B1422 -29.346 -15.061 20.005 1.00 0.01 C
ATOM 14 N9 G B1422 -28.547 -13.835 19.784 1.00 0.10 N
ATOM 15 C8 G B1422 -27.352 -13.461 20.348 1.00 0.10 C
ATOM 16 N7 G B1422 -26.886 -12.326 19.907 1.00 0.10 N
ATOM 17 C5 G B1422 -27.842 -11.925 19.003 1.00 0.10 C
ATOM 18 C6 G B1422 -27.898 -10.775 18.192 1.00 0.10 C
ATOM 19 O6 G B1422 -27.052 -9.867 18.159 1.00 0.10 O
ATOM 20 N1 G B1422 -29.038 -10.753 17.379 1.00 0.10 N
ATOM 21 C2 G B1422 -29.995 -11.729 17.386 1.00 0.10 C
ATOM 22 N2 G B1422 -31.054 -11.588 16.572 1.00 0.10 N
ATOM 23 N3 G B1422 -29.946 -12.801 18.146 1.00 0.10 N
ATOM 24 C4 G B1422 -28.855 -12.833 18.913 1.00 0.10 C
ATOM 25 P G B1423 -27.320 -18.406 17.181 1.00 0.01 P
ATOM 26 OP1 G B1423 -27.326 -19.853 16.970 1.00 0.01 O
ATOM 27 OP2 G B1423 -26.021 -17.702 17.170 1.00 0.01 O
ATOM 28 O5' G B1423 -28.281 -17.704 16.153 1.00 0.01 O
TER
ATOM 2 P C A1421 -20.403 -13.622 26.249 1.00 4.06 P
ATOM 3 OP1 C A1421 -19.167 -14.319 25.793 1.00 4.06 O
ATOM 4 OP2 C A1421 -20.510 -12.160 26.047 1.00 4.06 O
ATOM 5 O5' C A1421 -21.684 -14.333 25.643 1.00 4.06 O
ATOM 6 C5' C A1421 -21.671 -14.878 24.332 1.00 4.06 C
ATOM 7 C4' C A1421 -22.538 -16.116 24.228 1.00 4.06 C
ATOM 8 O4' C A1421 -22.577 -16.803 25.520 1.00 4.06 O
ATOM 9 C3' C A1421 -24.003 -15.882 23.827 1.00 4.06 C
ATOM 10 O3' C A1421 -24.380 -16.869 22.868 1.00 4.06 O
ATOM 11 C2' C A1421 -24.768 -16.108 25.143 1.00 4.06 C
ATOM 12 O2' C A1421 -26.100 -16.538 24.994 1.00 4.06 O
ATOM 13 C1' C A1421 -23.913 -17.182 25.788 1.00 4.06 C
ATOM 14 N1 C A1421 -24.101 -17.356 27.248 1.00 3.82 N
ATOM 15 C2 C A1421 -23.636 -18.569 27.777 1.00 3.82 C
ATOM 16 O2 C A1421 -23.085 -19.401 27.028 1.00 3.82 O
ATOM 17 N3 C A1421 -23.781 -18.817 29.102 1.00 3.82 N
ATOM 18 C4 C A1421 -24.402 -17.935 29.889 1.00 3.82 C
ATOM 19 N4 C A1421 -24.507 -18.258 31.181 1.00 3.82 N
ATOM 20 C5 C A1421 -24.897 -16.696 29.371 1.00 3.82 C
ATOM 21 C6 C A1421 -24.733 -16.454 28.054 1.00 3.82 C
ATOM 22 P G A1422 -24.364 -16.523 21.293 1.00 0.01 P
ATOM 23 OP1 G A1422 -23.894 -17.724 20.579 1.00 0.01 O
ATOM 24 OP2 G A1422 -23.606 -15.266 21.129 1.00 0.01 O
ATOM 25 O5' G A1422 -25.907 -16.262 20.987 1.00 0.01 O
TER
ATOM 1 O3' C B1421 -24.380 -16.869 22.868 1.00 4.06 O
ATOM 2 P G B1422 -24.364 -16.523 21.293 1.00 0.01 P
ATOM 3 OP1 G B1422 -23.894 -17.724 20.579 1.00 0.01 O
ATOM 4 OP2 G B1422 -23.606 -15.266 21.129 1.00 0.01 O
ATOM 5 O5' G B1422 -25.907 -16.262 20.987 1.00 0.01 O
ATOM 6 C5' G B1422 -26.918 -17.125 21.492 1.00 0.01 C
ATOM 7 C4' G B1422 -28.206 -16.959 20.728 1.00 0.01 C
ATOM 8 O4' G B1422 -28.835 -15.725 21.124 1.00 0.01 O
ATOM 9 C3' G B1422 -28.069 -16.868 19.215 1.00 0.01 C
ATOM 10 O3' G B1422 -28.056 -18.144 18.598 1.00 0.01 O
ATOM 11 C2' G B1422 -29.250 -16.013 18.822 1.00 0.01 C
ATOM 12 O2' G B1422 -30.424 -16.777 18.775 1.00 0.01 O
ATOM 13 C1' G B1422 -29.346 -15.061 20.005 1.00 0.01 C
ATOM 14 N9 G B1422 -28.547 -13.835 19.784 1.00 0.10 N
ATOM 15 C8 G B1422 -27.352 -13.461 20.348 1.00 0.10 C
ATOM 16 N7 G B1422 -26.886 -12.326 19.907 1.00 0.10 N
ATOM 17 C5 G B1422 -27.842 -11.925 19.003 1.00 0.10 C
ATOM 18 C6 G B1422 -27.898 -10.775 18.192 1.00 0.10 C
ATOM 19 O6 G B1422 -27.052 -9.867 18.159 1.00 0.10 O
ATOM 20 N1 G B1422 -29.038 -10.753 17.379 1.00 0.10 N
ATOM 21 C2 G B1422 -29.995 -11.729 17.386 1.00 0.10 C
ATOM 22 N2 G B1422 -31.054 -11.588 16.572 1.00 0.10 N
ATOM 23 N3 G B1422 -29.946 -12.801 18.146 1.00 0.10 N
ATOM 24 C4 G B1422 -28.855 -12.833 18.913 1.00 0.10 C
ATOM 25 P G B1423 -27.320 -18.406 17.181 1.00 0.01 P
ATOM 26 OP1 G B1423 -27.326 -19.853 16.970 1.00 0.01 O
ATOM 27 OP2 G B1423 -26.021 -17.702 17.170 1.00 0.01 O
ATOM 28 O5' G B1423 -28.281 -17.704 16.153 1.00 0.01 O
TER
Atoms:
C2: (-23.636,-18.569,27.777)
OP1: (-19.167,-14.319,25.793)
OP2: (-20.510,-12.160,26.047)
C4: (-24.402,-17.935,29.889)
O5': (-21.684,-14.333,25.643)
C3': (-24.003,-15.882,23.827)
C1': (-23.913,-17.182,25.788)
O4': (-22.577,-16.803,25.520)
C5': (-21.671,-14.878,24.332)
P: (-20.403,-13.622,26.249)
O2: (-23.085,-19.401,27.028)
C4': (-22.538,-16.116,24.228)
C2': (-24.768,-16.108,25.143)
O2': (-26.100,-16.538,24.994)
N1: (-24.101,-17.356,27.248)
N3: (-23.781,-18.817,29.102)
N4: (-24.507,-18.258,31.181)
C6: (-24.733,-16.454,28.054)
C5: (-24.897,-16.696,29.371)
O3': (-24.380,-16.869,22.868)
OP1: (-19.167,-14.319,25.793)
OP2: (-20.510,-12.160,26.047)
C4: (-24.402,-17.935,29.889)
O5': (-21.684,-14.333,25.643)
C3': (-24.003,-15.882,23.827)
C1': (-23.913,-17.182,25.788)
O4': (-22.577,-16.803,25.520)
C5': (-21.671,-14.878,24.332)
P: (-20.403,-13.622,26.249)
O2: (-23.085,-19.401,27.028)
C4': (-22.538,-16.116,24.228)
C2': (-24.768,-16.108,25.143)
O2': (-26.100,-16.538,24.994)
N1: (-24.101,-17.356,27.248)
N3: (-23.781,-18.817,29.102)
N4: (-24.507,-18.258,31.181)
C6: (-24.733,-16.454,28.054)
C5: (-24.897,-16.696,29.371)
O3': (-24.380,-16.869,22.868)
OP1: (-23.894,-17.724,20.579)
OP2: (-23.606,-15.266,21.129)
C3': (-28.069,-16.868,19.215)
C1': (-29.346,-15.061,20.005)
C5': (-26.918,-17.125,21.492)
O6: (-27.052,-9.867,18.159)
O4': (-28.835,-15.725,21.124)
C8: (-27.352,-13.461,20.348)
C2: (-29.995,-11.729,17.386)
C6: (-27.898,-10.775,18.192)
C5: (-27.842,-11.925,19.003)
C4: (-28.855,-12.833,18.913)
P: (-24.364,-16.523,21.293)
C4': (-28.206,-16.959,20.728)
C2': (-29.250,-16.013,18.822)
O2': (-30.424,-16.777,18.775)
N1: (-29.038,-10.753,17.379)
N2: (-31.054,-11.588,16.572)
N3: (-29.946,-12.801,18.146)
N7: (-26.886,-12.326,19.907)
N9: (-28.547,-13.835,19.784)
O5': (-25.907,-16.262,20.987)
O3': (-28.056,-18.144,18.598)
OP2: (-23.606,-15.266,21.129)
C3': (-28.069,-16.868,19.215)
C1': (-29.346,-15.061,20.005)
C5': (-26.918,-17.125,21.492)
O6: (-27.052,-9.867,18.159)
O4': (-28.835,-15.725,21.124)
C8: (-27.352,-13.461,20.348)
C2: (-29.995,-11.729,17.386)
C6: (-27.898,-10.775,18.192)
C5: (-27.842,-11.925,19.003)
C4: (-28.855,-12.833,18.913)
P: (-24.364,-16.523,21.293)
C4': (-28.206,-16.959,20.728)
C2': (-29.250,-16.013,18.822)
O2': (-30.424,-16.777,18.775)
N1: (-29.038,-10.753,17.379)
N2: (-31.054,-11.588,16.572)
N3: (-29.946,-12.801,18.146)
N7: (-26.886,-12.326,19.907)
N9: (-28.547,-13.835,19.784)
O5': (-25.907,-16.262,20.987)
O3': (-28.056,-18.144,18.598)
Image (generated by PyMOL):