Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11601:11602
Extra
PDB:
ATOM 1 O3' A A1600 8.727 23.340 133.999 1.00 56.21 O
ATOM 2 P C A1601 7.916 24.445 133.165 1.00 61.92 P
ATOM 3 OP1 C A1601 8.707 25.717 133.195 1.00 62.16 O
ATOM 4 OP2 C A1601 6.526 24.445 133.685 1.00 62.31 O
ATOM 5 O5' C A1601 7.961 23.809 131.721 1.00 61.17 O
ATOM 6 C5' C A1601 7.539 24.527 130.588 1.00 60.94 C
ATOM 7 C4' C A1601 8.328 24.116 129.401 1.00 60.28 C
ATOM 8 O4' C A1601 9.478 23.379 129.865 1.00 60.15 O
ATOM 9 C3' C A1601 7.610 23.219 128.401 1.00 59.77 C
ATOM 10 O3' C A1601 7.924 23.674 127.093 1.00 59.34 O
ATOM 11 C2' C A1601 8.255 21.842 128.629 1.00 59.46 C
ATOM 12 O2' C A1601 8.323 21.003 127.480 1.00 58.83 O
ATOM 13 C1' C A1601 9.638 22.230 129.083 1.00 59.56 C
ATOM 14 N1 C A1601 10.313 21.196 129.870 1.00 59.56 N
ATOM 15 C2 C A1601 11.693 21.180 129.840 1.00 59.40 C
ATOM 16 O2 C A1601 12.264 22.121 129.218 1.00 59.30 O
ATOM 17 N3 C A1601 12.295 20.170 130.530 1.00 59.39 N
ATOM 18 C4 C A1601 11.590 19.242 131.186 1.00 59.53 C
ATOM 19 N4 C A1601 12.194 18.270 131.864 1.00 59.54 N
ATOM 20 C5 C A1601 10.190 19.259 131.188 1.00 59.68 C
ATOM 21 C6 C A1601 9.602 20.238 130.507 1.00 59.68 C
ATOM 22 P G A1602 6.970 24.729 126.344 1.00 63.95 P
ATOM 23 OP1 G A1602 7.850 25.847 125.860 1.00 63.94 O
ATOM 24 OP2 G A1602 5.833 25.040 127.275 1.00 64.53 O
ATOM 25 O5' G A1602 6.427 23.879 125.104 1.00 63.37 O
TER
ATOM 1 O3' C B1601 7.924 23.674 127.093 1.00 59.34 O
ATOM 2 P G B1602 6.970 24.729 126.344 1.00 63.95 P
ATOM 3 OP1 G B1602 7.850 25.847 125.860 1.00 63.94 O
ATOM 4 OP2 G B1602 5.833 25.040 127.275 1.00 64.53 O
ATOM 5 O5' G B1602 6.427 23.879 125.104 1.00 63.37 O
ATOM 6 C5' G B1602 7.285 23.038 124.349 1.00 62.78 C
ATOM 7 C4' G B1602 6.687 22.712 123.001 1.00 62.31 C
ATOM 8 O4' G B1602 5.502 21.896 123.171 1.00 62.35 O
ATOM 9 C3' G B1602 6.222 23.904 122.188 1.00 62.37 C
ATOM 10 O3' G B1602 7.276 24.482 121.452 1.00 62.12 O
ATOM 11 C2' G B1602 5.109 23.327 121.321 1.00 62.10 C
ATOM 12 O2' G B1602 5.628 22.700 120.173 1.00 61.49 O
ATOM 13 C1' G B1602 4.516 22.257 122.233 1.00 62.24 C
ATOM 14 N9 G B1602 3.331 22.758 122.954 1.00 62.78 N
ATOM 15 C8 G B1602 3.205 23.183 124.238 1.00 63.34 C
ATOM 16 N7 G B1602 2.002 23.587 124.514 1.00 63.72 N
ATOM 17 C5 G B1602 1.292 23.436 123.344 1.00 63.38 C
ATOM 18 C6 G B1602 -0.061 23.704 122.995 1.00 63.54 C
ATOM 19 O6 G B1602 -0.993 24.150 123.662 1.00 64.03 O
ATOM 20 N1 G B1602 -0.336 23.384 121.694 1.00 63.07 N
ATOM 21 C2 G B1602 0.580 22.875 120.843 1.00 62.52 C
ATOM 22 N2 G B1602 0.159 22.617 119.611 1.00 62.13 N
ATOM 23 N3 G B1602 1.816 22.618 121.142 1.00 62.36 N
ATOM 24 C4 G B1602 2.108 22.921 122.396 1.00 62.81 C
ATOM 25 P U B1603 7.376 26.071 121.220 1.00 56.17 P
ATOM 26 OP1 U B1603 8.770 26.343 120.772 1.00 55.90 O
ATOM 27 OP2 U B1603 6.877 26.754 122.434 1.00 56.82 O
ATOM 28 O5' U B1603 6.365 26.301 120.018 1.00 55.96 O
TER
ATOM 2 P C A1601 7.916 24.445 133.165 1.00 61.92 P
ATOM 3 OP1 C A1601 8.707 25.717 133.195 1.00 62.16 O
ATOM 4 OP2 C A1601 6.526 24.445 133.685 1.00 62.31 O
ATOM 5 O5' C A1601 7.961 23.809 131.721 1.00 61.17 O
ATOM 6 C5' C A1601 7.539 24.527 130.588 1.00 60.94 C
ATOM 7 C4' C A1601 8.328 24.116 129.401 1.00 60.28 C
ATOM 8 O4' C A1601 9.478 23.379 129.865 1.00 60.15 O
ATOM 9 C3' C A1601 7.610 23.219 128.401 1.00 59.77 C
ATOM 10 O3' C A1601 7.924 23.674 127.093 1.00 59.34 O
ATOM 11 C2' C A1601 8.255 21.842 128.629 1.00 59.46 C
ATOM 12 O2' C A1601 8.323 21.003 127.480 1.00 58.83 O
ATOM 13 C1' C A1601 9.638 22.230 129.083 1.00 59.56 C
ATOM 14 N1 C A1601 10.313 21.196 129.870 1.00 59.56 N
ATOM 15 C2 C A1601 11.693 21.180 129.840 1.00 59.40 C
ATOM 16 O2 C A1601 12.264 22.121 129.218 1.00 59.30 O
ATOM 17 N3 C A1601 12.295 20.170 130.530 1.00 59.39 N
ATOM 18 C4 C A1601 11.590 19.242 131.186 1.00 59.53 C
ATOM 19 N4 C A1601 12.194 18.270 131.864 1.00 59.54 N
ATOM 20 C5 C A1601 10.190 19.259 131.188 1.00 59.68 C
ATOM 21 C6 C A1601 9.602 20.238 130.507 1.00 59.68 C
ATOM 22 P G A1602 6.970 24.729 126.344 1.00 63.95 P
ATOM 23 OP1 G A1602 7.850 25.847 125.860 1.00 63.94 O
ATOM 24 OP2 G A1602 5.833 25.040 127.275 1.00 64.53 O
ATOM 25 O5' G A1602 6.427 23.879 125.104 1.00 63.37 O
TER
ATOM 1 O3' C B1601 7.924 23.674 127.093 1.00 59.34 O
ATOM 2 P G B1602 6.970 24.729 126.344 1.00 63.95 P
ATOM 3 OP1 G B1602 7.850 25.847 125.860 1.00 63.94 O
ATOM 4 OP2 G B1602 5.833 25.040 127.275 1.00 64.53 O
ATOM 5 O5' G B1602 6.427 23.879 125.104 1.00 63.37 O
ATOM 6 C5' G B1602 7.285 23.038 124.349 1.00 62.78 C
ATOM 7 C4' G B1602 6.687 22.712 123.001 1.00 62.31 C
ATOM 8 O4' G B1602 5.502 21.896 123.171 1.00 62.35 O
ATOM 9 C3' G B1602 6.222 23.904 122.188 1.00 62.37 C
ATOM 10 O3' G B1602 7.276 24.482 121.452 1.00 62.12 O
ATOM 11 C2' G B1602 5.109 23.327 121.321 1.00 62.10 C
ATOM 12 O2' G B1602 5.628 22.700 120.173 1.00 61.49 O
ATOM 13 C1' G B1602 4.516 22.257 122.233 1.00 62.24 C
ATOM 14 N9 G B1602 3.331 22.758 122.954 1.00 62.78 N
ATOM 15 C8 G B1602 3.205 23.183 124.238 1.00 63.34 C
ATOM 16 N7 G B1602 2.002 23.587 124.514 1.00 63.72 N
ATOM 17 C5 G B1602 1.292 23.436 123.344 1.00 63.38 C
ATOM 18 C6 G B1602 -0.061 23.704 122.995 1.00 63.54 C
ATOM 19 O6 G B1602 -0.993 24.150 123.662 1.00 64.03 O
ATOM 20 N1 G B1602 -0.336 23.384 121.694 1.00 63.07 N
ATOM 21 C2 G B1602 0.580 22.875 120.843 1.00 62.52 C
ATOM 22 N2 G B1602 0.159 22.617 119.611 1.00 62.13 N
ATOM 23 N3 G B1602 1.816 22.618 121.142 1.00 62.36 N
ATOM 24 C4 G B1602 2.108 22.921 122.396 1.00 62.81 C
ATOM 25 P U B1603 7.376 26.071 121.220 1.00 56.17 P
ATOM 26 OP1 U B1603 8.770 26.343 120.772 1.00 55.90 O
ATOM 27 OP2 U B1603 6.877 26.754 122.434 1.00 56.82 O
ATOM 28 O5' U B1603 6.365 26.301 120.018 1.00 55.96 O
TER
Atoms:
C2: (11.693,21.180,129.840)
OP1: (8.707,25.717,133.195)
OP2: (6.526,24.445,133.685)
C4: (11.590,19.242,131.186)
O5': (7.961,23.809,131.721)
C3': (7.610,23.219,128.401)
C1': (9.638,22.230,129.083)
O4': (9.478,23.379,129.865)
C5': (7.539,24.527,130.588)
P: (7.916,24.445,133.165)
O2: (12.264,22.121,129.218)
C4': (8.328,24.116,129.401)
C2': (8.255,21.842,128.629)
O2': (8.323,21.003,127.480)
N1: (10.313,21.196,129.870)
N3: (12.295,20.170,130.530)
N4: (12.194,18.270,131.864)
C6: (9.602,20.238,130.507)
C5: (10.190,19.259,131.188)
O3': (7.924,23.674,127.093)
OP1: (8.707,25.717,133.195)
OP2: (6.526,24.445,133.685)
C4: (11.590,19.242,131.186)
O5': (7.961,23.809,131.721)
C3': (7.610,23.219,128.401)
C1': (9.638,22.230,129.083)
O4': (9.478,23.379,129.865)
C5': (7.539,24.527,130.588)
P: (7.916,24.445,133.165)
O2: (12.264,22.121,129.218)
C4': (8.328,24.116,129.401)
C2': (8.255,21.842,128.629)
O2': (8.323,21.003,127.480)
N1: (10.313,21.196,129.870)
N3: (12.295,20.170,130.530)
N4: (12.194,18.270,131.864)
C6: (9.602,20.238,130.507)
C5: (10.190,19.259,131.188)
O3': (7.924,23.674,127.093)
OP1: (7.850,25.847,125.860)
OP2: (5.833,25.040,127.275)
C3': (6.222,23.904,122.188)
C1': (4.516,22.257,122.233)
C5': (7.285,23.038,124.349)
O6: (-0.993,24.150,123.662)
O4': (5.502,21.896,123.171)
C8: (3.205,23.183,124.238)
C2: (0.580,22.875,120.843)
C6: (-0.061,23.704,122.995)
C5: (1.292,23.436,123.344)
C4: (2.108,22.921,122.396)
P: (6.970,24.729,126.344)
C4': (6.687,22.712,123.001)
C2': (5.109,23.327,121.321)
O2': (5.628,22.700,120.173)
N1: (-0.336,23.384,121.694)
N2: (0.159,22.617,119.611)
N3: (1.816,22.618,121.142)
N7: (2.002,23.587,124.514)
N9: (3.331,22.758,122.954)
O5': (6.427,23.879,125.104)
O3': (7.276,24.482,121.452)
OP2: (5.833,25.040,127.275)
C3': (6.222,23.904,122.188)
C1': (4.516,22.257,122.233)
C5': (7.285,23.038,124.349)
O6: (-0.993,24.150,123.662)
O4': (5.502,21.896,123.171)
C8: (3.205,23.183,124.238)
C2: (0.580,22.875,120.843)
C6: (-0.061,23.704,122.995)
C5: (1.292,23.436,123.344)
C4: (2.108,22.921,122.396)
P: (6.970,24.729,126.344)
C4': (6.687,22.712,123.001)
C2': (5.109,23.327,121.321)
O2': (5.628,22.700,120.173)
N1: (-0.336,23.384,121.694)
N2: (0.159,22.617,119.611)
N3: (1.816,22.618,121.142)
N7: (2.002,23.587,124.514)
N9: (3.331,22.758,122.954)
O5': (6.427,23.879,125.104)
O3': (7.276,24.482,121.452)
Image (generated by PyMOL):