Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2562:A2046
Extra
PDB:
ATOM 1 O3' A A2561 -18.207 110.724 176.793 1.00 40.18 O
ATOM 2 P G A2562 -18.100 109.206 177.266 1.00 32.89 P
ATOM 3 OP1 G A2562 -17.762 109.200 178.719 1.00 42.87 O
ATOM 4 OP2 G A2562 -17.208 108.530 176.291 1.00 37.50 O
ATOM 5 O5' G A2562 -19.606 108.707 177.032 1.00 38.94 O
ATOM 6 C5' G A2562 -20.119 108.650 175.720 1.00 37.00 C
ATOM 7 C4' G A2562 -19.440 107.536 174.964 1.00 32.57 C
ATOM 8 O4' G A2562 -20.089 106.280 175.266 1.00 34.37 O
ATOM 9 C3' G A2562 -19.546 107.653 173.462 1.00 36.52 C
ATOM 10 O3' G A2562 -18.493 108.479 173.000 1.00 46.50 O
ATOM 11 C2' G A2562 -19.374 106.207 173.007 1.00 35.43 C
ATOM 12 O2' G A2562 -18.013 105.840 172.914 1.00 47.78 O
ATOM 13 C1' G A2562 -20.085 105.440 174.119 1.00 40.02 C
ATOM 14 N9 G A2562 -21.462 105.175 173.727 1.00 42.28 N
ATOM 15 C8 G A2562 -22.608 105.640 174.321 1.00 36.44 C
ATOM 16 N7 G A2562 -23.687 105.236 173.716 1.00 38.93 N
ATOM 17 C5 G A2562 -23.229 104.462 172.658 1.00 39.17 C
ATOM 18 C6 G A2562 -23.936 103.763 171.652 1.00 44.49 C
ATOM 19 O6 G A2562 -25.157 103.686 171.486 1.00 49.47 O
ATOM 20 N1 G A2562 -23.091 103.098 170.775 1.00 43.34 N
ATOM 21 C2 G A2562 -21.723 103.124 170.871 1.00 45.42 C
ATOM 22 N2 G A2562 -21.056 102.435 169.937 1.00 52.27 N
ATOM 23 N3 G A2562 -21.045 103.776 171.806 1.00 45.49 N
ATOM 24 C4 G A2562 -21.863 104.419 172.659 1.00 42.29 C
ATOM 25 P C A2563 -18.687 109.209 171.583 1.00 35.16 P
ATOM 26 OP1 C A2563 -17.694 110.302 171.467 1.00 42.45 O
ATOM 27 OP2 C A2563 -20.124 109.513 171.427 1.00 50.26 O
ATOM 28 O5' C A2563 -18.361 108.056 170.531 1.00 35.18 O
TER
ATOM 1 O3' A B2045 -22.923 106.716 179.135 1.00 31.64 O
ATOM 2 P G B2046 -24.117 106.365 178.128 1.00 32.97 P
ATOM 3 OP1 G B2046 -24.067 104.961 177.666 1.00 45.38 O
ATOM 4 OP2 G B2046 -24.203 107.451 177.119 1.00 44.11 O
ATOM 5 O5' G B2046 -25.330 106.518 179.167 1.00 40.02 O
ATOM 6 C5' G B2046 -26.685 106.686 178.742 1.00 38.82 C
ATOM 7 C4' G B2046 -27.590 106.627 179.957 1.00 33.61 C
ATOM 8 O4' G B2046 -26.981 105.773 180.956 1.00 32.66 O
ATOM 9 C3' G B2046 -27.760 107.919 180.731 1.00 36.51 C
ATOM 10 O3' G B2046 -28.682 108.797 180.075 1.00 33.91 O
ATOM 11 C2' G B2046 -28.290 107.363 182.053 1.00 40.97 C
ATOM 12 O2' G B2046 -29.563 106.754 181.956 1.00 55.64 O
ATOM 13 C1' G B2046 -27.276 106.258 182.251 1.00 31.56 C
ATOM 14 N9 G B2046 -26.035 106.727 182.836 1.00 34.42 N
ATOM 15 C8 G B2046 -24.781 106.688 182.274 1.00 39.73 C
ATOM 16 N7 G B2046 -23.855 107.188 183.050 1.00 45.72 N
ATOM 17 C5 G B2046 -24.540 107.577 184.190 1.00 39.56 C
ATOM 18 C6 G B2046 -24.065 108.178 185.366 1.00 43.63 C
ATOM 19 O6 G B2046 -22.915 108.497 185.652 1.00 49.29 O
ATOM 20 N1 G B2046 -25.093 108.408 186.269 1.00 47.91 N
ATOM 21 C2 G B2046 -26.418 108.091 186.058 1.00 45.18 C
ATOM 22 N2 G B2046 -27.261 108.394 187.057 1.00 47.03 N
ATOM 23 N3 G B2046 -26.886 107.520 184.952 1.00 40.29 N
ATOM 24 C4 G B2046 -25.885 107.300 184.071 1.00 38.97 C
ATOM 25 P G B2047 -28.295 110.352 179.873 1.00 34.80 P
ATOM 26 OP1 G B2047 -29.206 110.885 178.827 1.00 40.72 O
ATOM 27 OP2 G B2047 -26.816 110.450 179.681 1.00 40.34 O
ATOM 28 O5' G B2047 -28.673 110.969 181.308 1.00 34.24 O
TER
ATOM 2 P G A2562 -18.100 109.206 177.266 1.00 32.89 P
ATOM 3 OP1 G A2562 -17.762 109.200 178.719 1.00 42.87 O
ATOM 4 OP2 G A2562 -17.208 108.530 176.291 1.00 37.50 O
ATOM 5 O5' G A2562 -19.606 108.707 177.032 1.00 38.94 O
ATOM 6 C5' G A2562 -20.119 108.650 175.720 1.00 37.00 C
ATOM 7 C4' G A2562 -19.440 107.536 174.964 1.00 32.57 C
ATOM 8 O4' G A2562 -20.089 106.280 175.266 1.00 34.37 O
ATOM 9 C3' G A2562 -19.546 107.653 173.462 1.00 36.52 C
ATOM 10 O3' G A2562 -18.493 108.479 173.000 1.00 46.50 O
ATOM 11 C2' G A2562 -19.374 106.207 173.007 1.00 35.43 C
ATOM 12 O2' G A2562 -18.013 105.840 172.914 1.00 47.78 O
ATOM 13 C1' G A2562 -20.085 105.440 174.119 1.00 40.02 C
ATOM 14 N9 G A2562 -21.462 105.175 173.727 1.00 42.28 N
ATOM 15 C8 G A2562 -22.608 105.640 174.321 1.00 36.44 C
ATOM 16 N7 G A2562 -23.687 105.236 173.716 1.00 38.93 N
ATOM 17 C5 G A2562 -23.229 104.462 172.658 1.00 39.17 C
ATOM 18 C6 G A2562 -23.936 103.763 171.652 1.00 44.49 C
ATOM 19 O6 G A2562 -25.157 103.686 171.486 1.00 49.47 O
ATOM 20 N1 G A2562 -23.091 103.098 170.775 1.00 43.34 N
ATOM 21 C2 G A2562 -21.723 103.124 170.871 1.00 45.42 C
ATOM 22 N2 G A2562 -21.056 102.435 169.937 1.00 52.27 N
ATOM 23 N3 G A2562 -21.045 103.776 171.806 1.00 45.49 N
ATOM 24 C4 G A2562 -21.863 104.419 172.659 1.00 42.29 C
ATOM 25 P C A2563 -18.687 109.209 171.583 1.00 35.16 P
ATOM 26 OP1 C A2563 -17.694 110.302 171.467 1.00 42.45 O
ATOM 27 OP2 C A2563 -20.124 109.513 171.427 1.00 50.26 O
ATOM 28 O5' C A2563 -18.361 108.056 170.531 1.00 35.18 O
TER
ATOM 1 O3' A B2045 -22.923 106.716 179.135 1.00 31.64 O
ATOM 2 P G B2046 -24.117 106.365 178.128 1.00 32.97 P
ATOM 3 OP1 G B2046 -24.067 104.961 177.666 1.00 45.38 O
ATOM 4 OP2 G B2046 -24.203 107.451 177.119 1.00 44.11 O
ATOM 5 O5' G B2046 -25.330 106.518 179.167 1.00 40.02 O
ATOM 6 C5' G B2046 -26.685 106.686 178.742 1.00 38.82 C
ATOM 7 C4' G B2046 -27.590 106.627 179.957 1.00 33.61 C
ATOM 8 O4' G B2046 -26.981 105.773 180.956 1.00 32.66 O
ATOM 9 C3' G B2046 -27.760 107.919 180.731 1.00 36.51 C
ATOM 10 O3' G B2046 -28.682 108.797 180.075 1.00 33.91 O
ATOM 11 C2' G B2046 -28.290 107.363 182.053 1.00 40.97 C
ATOM 12 O2' G B2046 -29.563 106.754 181.956 1.00 55.64 O
ATOM 13 C1' G B2046 -27.276 106.258 182.251 1.00 31.56 C
ATOM 14 N9 G B2046 -26.035 106.727 182.836 1.00 34.42 N
ATOM 15 C8 G B2046 -24.781 106.688 182.274 1.00 39.73 C
ATOM 16 N7 G B2046 -23.855 107.188 183.050 1.00 45.72 N
ATOM 17 C5 G B2046 -24.540 107.577 184.190 1.00 39.56 C
ATOM 18 C6 G B2046 -24.065 108.178 185.366 1.00 43.63 C
ATOM 19 O6 G B2046 -22.915 108.497 185.652 1.00 49.29 O
ATOM 20 N1 G B2046 -25.093 108.408 186.269 1.00 47.91 N
ATOM 21 C2 G B2046 -26.418 108.091 186.058 1.00 45.18 C
ATOM 22 N2 G B2046 -27.261 108.394 187.057 1.00 47.03 N
ATOM 23 N3 G B2046 -26.886 107.520 184.952 1.00 40.29 N
ATOM 24 C4 G B2046 -25.885 107.300 184.071 1.00 38.97 C
ATOM 25 P G B2047 -28.295 110.352 179.873 1.00 34.80 P
ATOM 26 OP1 G B2047 -29.206 110.885 178.827 1.00 40.72 O
ATOM 27 OP2 G B2047 -26.816 110.450 179.681 1.00 40.34 O
ATOM 28 O5' G B2047 -28.673 110.969 181.308 1.00 34.24 O
TER
Atoms:
OP1: (-17.762,109.200,178.719)
OP2: (-17.208,108.530,176.291)
C3': (-19.546,107.653,173.462)
C1': (-20.085,105.440,174.119)
C5': (-20.119,108.650,175.720)
O6: (-25.157,103.686,171.486)
O4': (-20.089,106.280,175.266)
C8: (-22.608,105.640,174.321)
C2: (-21.723,103.124,170.871)
C6: (-23.936,103.763,171.652)
C5: (-23.229,104.462,172.658)
C4: (-21.863,104.419,172.659)
P: (-18.100,109.206,177.266)
C4': (-19.440,107.536,174.964)
C2': (-19.374,106.207,173.007)
O2': (-18.013,105.840,172.914)
N1: (-23.091,103.098,170.775)
N2: (-21.056,102.435,169.937)
N3: (-21.045,103.776,171.806)
N7: (-23.687,105.236,173.716)
N9: (-21.462,105.175,173.727)
O5': (-19.606,108.707,177.032)
O3': (-18.493,108.479,173.000)
OP2: (-17.208,108.530,176.291)
C3': (-19.546,107.653,173.462)
C1': (-20.085,105.440,174.119)
C5': (-20.119,108.650,175.720)
O6: (-25.157,103.686,171.486)
O4': (-20.089,106.280,175.266)
C8: (-22.608,105.640,174.321)
C2: (-21.723,103.124,170.871)
C6: (-23.936,103.763,171.652)
C5: (-23.229,104.462,172.658)
C4: (-21.863,104.419,172.659)
P: (-18.100,109.206,177.266)
C4': (-19.440,107.536,174.964)
C2': (-19.374,106.207,173.007)
O2': (-18.013,105.840,172.914)
N1: (-23.091,103.098,170.775)
N2: (-21.056,102.435,169.937)
N3: (-21.045,103.776,171.806)
N7: (-23.687,105.236,173.716)
N9: (-21.462,105.175,173.727)
O5': (-19.606,108.707,177.032)
O3': (-18.493,108.479,173.000)
OP1: (-24.067,104.961,177.666)
OP2: (-24.203,107.451,177.119)
C3': (-27.760,107.919,180.731)
C1': (-27.276,106.258,182.251)
C5': (-26.685,106.686,178.742)
O6: (-22.915,108.497,185.652)
O4': (-26.981,105.773,180.956)
C8: (-24.781,106.688,182.274)
C2: (-26.418,108.091,186.058)
C6: (-24.065,108.178,185.366)
C5: (-24.540,107.577,184.190)
C4: (-25.885,107.300,184.071)
P: (-24.117,106.365,178.128)
C4': (-27.590,106.627,179.957)
C2': (-28.290,107.363,182.053)
O2': (-29.563,106.754,181.956)
N1: (-25.093,108.408,186.269)
N2: (-27.261,108.394,187.057)
N3: (-26.886,107.520,184.952)
N7: (-23.855,107.188,183.050)
N9: (-26.035,106.727,182.836)
O5': (-25.330,106.518,179.167)
O3': (-28.682,108.797,180.075)
OP2: (-24.203,107.451,177.119)
C3': (-27.760,107.919,180.731)
C1': (-27.276,106.258,182.251)
C5': (-26.685,106.686,178.742)
O6: (-22.915,108.497,185.652)
O4': (-26.981,105.773,180.956)
C8: (-24.781,106.688,182.274)
C2: (-26.418,108.091,186.058)
C6: (-24.065,108.178,185.366)
C5: (-24.540,107.577,184.190)
C4: (-25.885,107.300,184.071)
P: (-24.117,106.365,178.128)
C4': (-27.590,106.627,179.957)
C2': (-28.290,107.363,182.053)
O2': (-29.563,106.754,181.956)
N1: (-25.093,108.408,186.269)
N2: (-27.261,108.394,187.057)
N3: (-26.886,107.520,184.952)
N7: (-23.855,107.188,183.050)
N9: (-26.035,106.727,182.836)
O5': (-25.330,106.518,179.167)
O3': (-28.682,108.797,180.075)
Image (generated by PyMOL):