Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1964:A1821
Extra
PDB:
ATOM 1 O3' U A1963 -28.864 127.437 126.048 1.00 33.09 O
ATOM 2 P G A1964 -28.870 125.881 125.658 1.00 8.24 P
ATOM 3 OP1 G A1964 -30.297 125.451 125.643 1.00 8.24 O
ATOM 4 OP2 G A1964 -27.918 125.176 126.544 1.00 8.24 O
ATOM 5 O5' G A1964 -28.293 125.916 124.180 1.00 8.24 O
ATOM 6 C5' G A1964 -27.903 124.732 123.524 1.00 8.24 C
ATOM 7 C4' G A1964 -28.736 124.486 122.288 1.00 8.24 C
ATOM 8 O4' G A1964 -28.159 125.190 121.153 1.00 8.24 O
ATOM 9 C3' G A1964 -28.804 123.044 121.856 1.00 8.24 C
ATOM 10 O3' G A1964 -29.834 122.347 122.503 1.00 8.24 O
ATOM 11 C2' G A1964 -28.976 123.119 120.358 1.00 8.24 C
ATOM 12 O2' G A1964 -30.337 123.310 120.041 1.00 8.24 O
ATOM 13 C1' G A1964 -28.209 124.392 120.002 1.00 8.24 C
ATOM 14 N9 G A1964 -26.821 124.125 119.559 1.00 8.00 N
ATOM 15 C8 G A1964 -25.716 124.589 120.211 1.00 8.00 C
ATOM 16 N7 G A1964 -24.578 124.264 119.654 1.00 8.00 N
ATOM 17 C5 G A1964 -24.935 123.547 118.546 1.00 8.00 C
ATOM 18 C6 G A1964 -24.094 122.955 117.575 1.00 8.00 C
ATOM 19 O6 G A1964 -22.855 122.955 117.515 1.00 8.00 O
ATOM 20 N1 G A1964 -24.843 122.324 116.598 1.00 8.00 N
ATOM 21 C2 G A1964 -26.203 122.292 116.598 1.00 8.00 C
ATOM 22 N2 G A1964 -26.742 121.643 115.581 1.00 8.00 N
ATOM 23 N3 G A1964 -26.992 122.841 117.492 1.00 8.00 N
ATOM 24 C4 G A1964 -26.307 123.461 118.456 1.00 8.00 C
ATOM 25 P G A1965 -29.591 120.826 122.935 1.00 0.96 P
ATOM 26 OP1 G A1965 -30.485 120.543 124.082 1.00 0.96 O
ATOM 27 OP2 G A1965 -28.125 120.656 123.124 1.00 0.96 O
ATOM 28 O5' G A1965 -30.077 120.003 121.646 1.00 0.96 O
TER
ATOM 1 O3' U B1820 -24.056 125.717 123.673 1.00 0.01 O
ATOM 2 P G B1821 -23.844 124.940 125.037 1.00 0.01 P
ATOM 3 OP1 G B1821 -24.986 124.013 125.181 1.00 0.01 O
ATOM 4 OP2 G B1821 -23.625 125.975 126.076 1.00 0.01 O
ATOM 5 O5' G B1821 -22.495 124.139 124.767 1.00 0.01 O
ATOM 6 C5' G B1821 -22.107 123.822 123.444 1.00 0.01 C
ATOM 7 C4' G B1821 -20.622 123.877 123.266 1.00 0.01 C
ATOM 8 O4' G B1821 -20.153 125.195 123.629 1.00 0.01 O
ATOM 9 C3' G B1821 -19.842 122.891 124.116 1.00 0.01 C
ATOM 10 O3' G B1821 -18.675 122.454 123.398 1.00 0.01 O
ATOM 11 C2' G B1821 -19.443 123.735 125.323 1.00 0.01 C
ATOM 12 O2' G B1821 -18.309 123.262 126.015 1.00 0.01 O
ATOM 13 C1' G B1821 -19.197 125.094 124.666 1.00 0.01 C
ATOM 14 N9 G B1821 -19.346 126.271 125.556 1.00 0.23 N
ATOM 15 C8 G B1821 -20.498 126.887 125.988 1.00 0.23 C
ATOM 16 N7 G B1821 -20.302 127.936 126.735 1.00 0.23 N
ATOM 17 C5 G B1821 -18.926 128.064 126.807 1.00 0.23 C
ATOM 18 C6 G B1821 -18.096 129.026 127.478 1.00 0.23 C
ATOM 19 O6 G B1821 -18.351 130.032 128.207 1.00 0.23 O
ATOM 20 N1 G B1821 -16.761 128.722 127.250 1.00 0.23 N
ATOM 21 C2 G B1821 -16.263 127.697 126.510 1.00 0.23 C
ATOM 22 N2 G B1821 -14.924 127.648 126.468 1.00 0.23 N
ATOM 23 N3 G B1821 -17.013 126.814 125.889 1.00 0.23 N
ATOM 24 C4 G B1821 -18.329 127.052 126.072 1.00 0.23 C
ATOM 25 P A B1822 -18.482 120.887 123.032 1.00 8.91 P
ATOM 26 OP1 A B1822 -19.747 120.417 122.398 1.00 8.91 O
ATOM 27 OP2 A B1822 -18.001 120.218 124.264 1.00 8.91 O
ATOM 28 O5' A B1822 -17.319 120.913 121.955 1.00 8.91 O
TER
ATOM 2 P G A1964 -28.870 125.881 125.658 1.00 8.24 P
ATOM 3 OP1 G A1964 -30.297 125.451 125.643 1.00 8.24 O
ATOM 4 OP2 G A1964 -27.918 125.176 126.544 1.00 8.24 O
ATOM 5 O5' G A1964 -28.293 125.916 124.180 1.00 8.24 O
ATOM 6 C5' G A1964 -27.903 124.732 123.524 1.00 8.24 C
ATOM 7 C4' G A1964 -28.736 124.486 122.288 1.00 8.24 C
ATOM 8 O4' G A1964 -28.159 125.190 121.153 1.00 8.24 O
ATOM 9 C3' G A1964 -28.804 123.044 121.856 1.00 8.24 C
ATOM 10 O3' G A1964 -29.834 122.347 122.503 1.00 8.24 O
ATOM 11 C2' G A1964 -28.976 123.119 120.358 1.00 8.24 C
ATOM 12 O2' G A1964 -30.337 123.310 120.041 1.00 8.24 O
ATOM 13 C1' G A1964 -28.209 124.392 120.002 1.00 8.24 C
ATOM 14 N9 G A1964 -26.821 124.125 119.559 1.00 8.00 N
ATOM 15 C8 G A1964 -25.716 124.589 120.211 1.00 8.00 C
ATOM 16 N7 G A1964 -24.578 124.264 119.654 1.00 8.00 N
ATOM 17 C5 G A1964 -24.935 123.547 118.546 1.00 8.00 C
ATOM 18 C6 G A1964 -24.094 122.955 117.575 1.00 8.00 C
ATOM 19 O6 G A1964 -22.855 122.955 117.515 1.00 8.00 O
ATOM 20 N1 G A1964 -24.843 122.324 116.598 1.00 8.00 N
ATOM 21 C2 G A1964 -26.203 122.292 116.598 1.00 8.00 C
ATOM 22 N2 G A1964 -26.742 121.643 115.581 1.00 8.00 N
ATOM 23 N3 G A1964 -26.992 122.841 117.492 1.00 8.00 N
ATOM 24 C4 G A1964 -26.307 123.461 118.456 1.00 8.00 C
ATOM 25 P G A1965 -29.591 120.826 122.935 1.00 0.96 P
ATOM 26 OP1 G A1965 -30.485 120.543 124.082 1.00 0.96 O
ATOM 27 OP2 G A1965 -28.125 120.656 123.124 1.00 0.96 O
ATOM 28 O5' G A1965 -30.077 120.003 121.646 1.00 0.96 O
TER
ATOM 1 O3' U B1820 -24.056 125.717 123.673 1.00 0.01 O
ATOM 2 P G B1821 -23.844 124.940 125.037 1.00 0.01 P
ATOM 3 OP1 G B1821 -24.986 124.013 125.181 1.00 0.01 O
ATOM 4 OP2 G B1821 -23.625 125.975 126.076 1.00 0.01 O
ATOM 5 O5' G B1821 -22.495 124.139 124.767 1.00 0.01 O
ATOM 6 C5' G B1821 -22.107 123.822 123.444 1.00 0.01 C
ATOM 7 C4' G B1821 -20.622 123.877 123.266 1.00 0.01 C
ATOM 8 O4' G B1821 -20.153 125.195 123.629 1.00 0.01 O
ATOM 9 C3' G B1821 -19.842 122.891 124.116 1.00 0.01 C
ATOM 10 O3' G B1821 -18.675 122.454 123.398 1.00 0.01 O
ATOM 11 C2' G B1821 -19.443 123.735 125.323 1.00 0.01 C
ATOM 12 O2' G B1821 -18.309 123.262 126.015 1.00 0.01 O
ATOM 13 C1' G B1821 -19.197 125.094 124.666 1.00 0.01 C
ATOM 14 N9 G B1821 -19.346 126.271 125.556 1.00 0.23 N
ATOM 15 C8 G B1821 -20.498 126.887 125.988 1.00 0.23 C
ATOM 16 N7 G B1821 -20.302 127.936 126.735 1.00 0.23 N
ATOM 17 C5 G B1821 -18.926 128.064 126.807 1.00 0.23 C
ATOM 18 C6 G B1821 -18.096 129.026 127.478 1.00 0.23 C
ATOM 19 O6 G B1821 -18.351 130.032 128.207 1.00 0.23 O
ATOM 20 N1 G B1821 -16.761 128.722 127.250 1.00 0.23 N
ATOM 21 C2 G B1821 -16.263 127.697 126.510 1.00 0.23 C
ATOM 22 N2 G B1821 -14.924 127.648 126.468 1.00 0.23 N
ATOM 23 N3 G B1821 -17.013 126.814 125.889 1.00 0.23 N
ATOM 24 C4 G B1821 -18.329 127.052 126.072 1.00 0.23 C
ATOM 25 P A B1822 -18.482 120.887 123.032 1.00 8.91 P
ATOM 26 OP1 A B1822 -19.747 120.417 122.398 1.00 8.91 O
ATOM 27 OP2 A B1822 -18.001 120.218 124.264 1.00 8.91 O
ATOM 28 O5' A B1822 -17.319 120.913 121.955 1.00 8.91 O
TER
Atoms:
OP1: (-30.297,125.451,125.643)
OP2: (-27.918,125.176,126.544)
C3': (-28.804,123.044,121.856)
C1': (-28.209,124.392,120.002)
C5': (-27.903,124.732,123.524)
O6: (-22.855,122.955,117.515)
O4': (-28.159,125.190,121.153)
C8: (-25.716,124.589,120.211)
C2: (-26.203,122.292,116.598)
C6: (-24.094,122.955,117.575)
C5: (-24.935,123.547,118.546)
C4: (-26.307,123.461,118.456)
P: (-28.870,125.881,125.658)
C4': (-28.736,124.486,122.288)
C2': (-28.976,123.119,120.358)
O2': (-30.337,123.310,120.041)
N1: (-24.843,122.324,116.598)
N2: (-26.742,121.643,115.581)
N3: (-26.992,122.841,117.492)
N7: (-24.578,124.264,119.654)
N9: (-26.821,124.125,119.559)
O5': (-28.293,125.916,124.180)
O3': (-29.834,122.347,122.503)
OP2: (-27.918,125.176,126.544)
C3': (-28.804,123.044,121.856)
C1': (-28.209,124.392,120.002)
C5': (-27.903,124.732,123.524)
O6: (-22.855,122.955,117.515)
O4': (-28.159,125.190,121.153)
C8: (-25.716,124.589,120.211)
C2: (-26.203,122.292,116.598)
C6: (-24.094,122.955,117.575)
C5: (-24.935,123.547,118.546)
C4: (-26.307,123.461,118.456)
P: (-28.870,125.881,125.658)
C4': (-28.736,124.486,122.288)
C2': (-28.976,123.119,120.358)
O2': (-30.337,123.310,120.041)
N1: (-24.843,122.324,116.598)
N2: (-26.742,121.643,115.581)
N3: (-26.992,122.841,117.492)
N7: (-24.578,124.264,119.654)
N9: (-26.821,124.125,119.559)
O5': (-28.293,125.916,124.180)
O3': (-29.834,122.347,122.503)
OP1: (-24.986,124.013,125.181)
OP2: (-23.625,125.975,126.076)
C3': (-19.842,122.891,124.116)
C1': (-19.197,125.094,124.666)
C5': (-22.107,123.822,123.444)
O6: (-18.351,130.032,128.207)
O4': (-20.153,125.195,123.629)
C8: (-20.498,126.887,125.988)
C2: (-16.263,127.697,126.510)
C6: (-18.096,129.026,127.478)
C5: (-18.926,128.064,126.807)
C4: (-18.329,127.052,126.072)
P: (-23.844,124.940,125.037)
C4': (-20.622,123.877,123.266)
C2': (-19.443,123.735,125.323)
O2': (-18.309,123.262,126.015)
N1: (-16.761,128.722,127.250)
N2: (-14.924,127.648,126.468)
N3: (-17.013,126.814,125.889)
N7: (-20.302,127.936,126.735)
N9: (-19.346,126.271,125.556)
O5': (-22.495,124.139,124.767)
O3': (-18.675,122.454,123.398)
OP2: (-23.625,125.975,126.076)
C3': (-19.842,122.891,124.116)
C1': (-19.197,125.094,124.666)
C5': (-22.107,123.822,123.444)
O6: (-18.351,130.032,128.207)
O4': (-20.153,125.195,123.629)
C8: (-20.498,126.887,125.988)
C2: (-16.263,127.697,126.510)
C6: (-18.096,129.026,127.478)
C5: (-18.926,128.064,126.807)
C4: (-18.329,127.052,126.072)
P: (-23.844,124.940,125.037)
C4': (-20.622,123.877,123.266)
C2': (-19.443,123.735,125.323)
O2': (-18.309,123.262,126.015)
N1: (-16.761,128.722,127.250)
N2: (-14.924,127.648,126.468)
N3: (-17.013,126.814,125.889)
N7: (-20.302,127.936,126.735)
N9: (-19.346,126.271,125.556)
O5': (-22.495,124.139,124.767)
O3': (-18.675,122.454,123.398)
Image (generated by PyMOL):