Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11096:12178
Extra
PDB:
ATOM 1 O3' U A1095 51.545 2.052 39.319 1.00 40.02 O
ATOM 2 P G A1096 52.479 0.844 39.735 1.00 37.43 P
ATOM 3 OP1 G A1096 53.174 1.253 40.947 1.00 37.29 O
ATOM 4 OP2 G A1096 53.249 0.454 38.570 1.00 37.61 O
ATOM 5 O5' G A1096 51.481 -0.264 40.073 1.00 37.31 O
ATOM 6 C5' G A1096 50.822 -0.220 41.275 1.00 37.12 C
ATOM 7 C4' G A1096 49.533 -0.890 41.159 1.00 37.09 C
ATOM 8 O4' G A1096 48.964 -0.629 39.849 1.00 37.30 O
ATOM 9 C3' G A1096 49.586 -2.384 41.307 1.00 37.02 C
ATOM 10 O3' G A1096 48.656 -2.722 42.258 1.00 36.87 O
ATOM 11 C2' G A1096 49.115 -2.927 39.942 1.00 37.21 C
ATOM 12 O2' G A1096 48.324 -4.099 40.012 1.00 37.17 O
ATOM 13 C1' G A1096 48.292 -1.786 39.421 1.00 37.32 C
ATOM 14 N9 G A1096 48.171 -1.793 37.961 1.00 37.55 N
ATOM 15 C8 G A1096 47.004 -2.099 37.250 1.00 37.67 C
ATOM 16 N7 G A1096 47.174 -2.107 35.964 1.00 37.89 N
ATOM 17 C5 G A1096 48.508 -1.809 35.827 1.00 37.93 C
ATOM 18 C6 G A1096 49.242 -1.694 34.657 1.00 38.15 C
ATOM 19 O6 G A1096 48.818 -1.832 33.526 1.00 38.36 O
ATOM 20 N1 G A1096 50.553 -1.391 34.869 1.00 38.13 N
ATOM 21 C2 G A1096 51.047 -1.228 36.116 1.00 37.91 C
ATOM 22 N2 G A1096 52.309 -0.907 36.098 1.00 37.95 N
ATOM 23 N3 G A1096 50.418 -1.329 37.268 1.00 37.70 N
ATOM 24 C4 G A1096 49.150 -1.631 37.032 1.00 37.72 C
ATOM 25 P A A1097 49.069 -3.687 43.412 1.00 36.92 P
ATOM 26 OP1 A A1097 47.839 -3.887 44.253 1.00 36.80 O
ATOM 27 OP2 A A1097 50.310 -3.088 44.028 1.00 36.88 O
ATOM 28 O5' A A1097 49.404 -5.072 42.646 1.00 37.01 O
TER
ATOM 1 O3' G B2177 43.884 -0.860 38.794 1.00 38.75 O
ATOM 2 P G B2178 43.213 -1.825 39.868 1.00 36.80 P
ATOM 3 OP1 G B2178 43.699 -3.153 39.593 1.00 36.80 O
ATOM 4 OP2 G B2178 41.767 -1.585 39.839 1.00 36.85 O
ATOM 5 O5' G B2178 43.788 -1.282 41.234 1.00 36.60 O
ATOM 6 C5' G B2178 45.065 -1.666 41.683 1.00 36.50 C
ATOM 7 C4' G B2178 45.358 -1.087 43.011 1.00 36.34 C
ATOM 8 O4' G B2178 45.414 0.336 42.912 1.00 36.41 O
ATOM 9 C3' G B2178 44.336 -1.295 44.066 1.00 36.19 C
ATOM 10 O3' G B2178 44.331 -2.604 44.538 1.00 36.09 O
ATOM 11 C2' G B2178 44.772 -0.266 45.091 1.00 36.10 C
ATOM 12 O2' G B2178 45.918 -0.723 45.788 1.00 35.99 O
ATOM 13 C1' G B2178 45.179 0.898 44.170 1.00 36.27 C
ATOM 14 N9 G B2178 44.082 1.839 44.039 1.00 36.35 N
ATOM 15 C8 G B2178 43.075 1.671 43.137 1.00 36.48 C
ATOM 16 N7 G B2178 42.120 2.522 43.299 1.00 36.53 N
ATOM 17 C5 G B2178 42.493 3.243 44.396 1.00 36.42 C
ATOM 18 C6 G B2178 41.801 4.310 44.988 1.00 36.44 C
ATOM 19 O6 G B2178 40.713 4.792 44.624 1.00 36.55 O
ATOM 20 N1 G B2178 42.530 4.801 46.068 1.00 36.33 N
ATOM 21 C2 G B2178 43.759 4.333 46.452 1.00 36.23 C
ATOM 22 N2 G B2178 44.297 4.985 47.490 1.00 36.15 N
ATOM 23 N3 G B2178 44.423 3.340 45.884 1.00 36.21 N
ATOM 24 C4 G B2178 43.719 2.849 44.864 1.00 36.31 C
ATOM 25 P A B2179 42.957 -3.311 44.947 1.00 33.81 P
ATOM 26 OP1 A B2179 43.195 -4.755 44.953 1.00 33.78 O
ATOM 27 OP2 A B2179 41.891 -2.780 44.079 1.00 33.96 O
ATOM 28 O5' A B2179 42.725 -2.813 46.391 1.00 33.65 O
TER
ATOM 2 P G A1096 52.479 0.844 39.735 1.00 37.43 P
ATOM 3 OP1 G A1096 53.174 1.253 40.947 1.00 37.29 O
ATOM 4 OP2 G A1096 53.249 0.454 38.570 1.00 37.61 O
ATOM 5 O5' G A1096 51.481 -0.264 40.073 1.00 37.31 O
ATOM 6 C5' G A1096 50.822 -0.220 41.275 1.00 37.12 C
ATOM 7 C4' G A1096 49.533 -0.890 41.159 1.00 37.09 C
ATOM 8 O4' G A1096 48.964 -0.629 39.849 1.00 37.30 O
ATOM 9 C3' G A1096 49.586 -2.384 41.307 1.00 37.02 C
ATOM 10 O3' G A1096 48.656 -2.722 42.258 1.00 36.87 O
ATOM 11 C2' G A1096 49.115 -2.927 39.942 1.00 37.21 C
ATOM 12 O2' G A1096 48.324 -4.099 40.012 1.00 37.17 O
ATOM 13 C1' G A1096 48.292 -1.786 39.421 1.00 37.32 C
ATOM 14 N9 G A1096 48.171 -1.793 37.961 1.00 37.55 N
ATOM 15 C8 G A1096 47.004 -2.099 37.250 1.00 37.67 C
ATOM 16 N7 G A1096 47.174 -2.107 35.964 1.00 37.89 N
ATOM 17 C5 G A1096 48.508 -1.809 35.827 1.00 37.93 C
ATOM 18 C6 G A1096 49.242 -1.694 34.657 1.00 38.15 C
ATOM 19 O6 G A1096 48.818 -1.832 33.526 1.00 38.36 O
ATOM 20 N1 G A1096 50.553 -1.391 34.869 1.00 38.13 N
ATOM 21 C2 G A1096 51.047 -1.228 36.116 1.00 37.91 C
ATOM 22 N2 G A1096 52.309 -0.907 36.098 1.00 37.95 N
ATOM 23 N3 G A1096 50.418 -1.329 37.268 1.00 37.70 N
ATOM 24 C4 G A1096 49.150 -1.631 37.032 1.00 37.72 C
ATOM 25 P A A1097 49.069 -3.687 43.412 1.00 36.92 P
ATOM 26 OP1 A A1097 47.839 -3.887 44.253 1.00 36.80 O
ATOM 27 OP2 A A1097 50.310 -3.088 44.028 1.00 36.88 O
ATOM 28 O5' A A1097 49.404 -5.072 42.646 1.00 37.01 O
TER
ATOM 1 O3' G B2177 43.884 -0.860 38.794 1.00 38.75 O
ATOM 2 P G B2178 43.213 -1.825 39.868 1.00 36.80 P
ATOM 3 OP1 G B2178 43.699 -3.153 39.593 1.00 36.80 O
ATOM 4 OP2 G B2178 41.767 -1.585 39.839 1.00 36.85 O
ATOM 5 O5' G B2178 43.788 -1.282 41.234 1.00 36.60 O
ATOM 6 C5' G B2178 45.065 -1.666 41.683 1.00 36.50 C
ATOM 7 C4' G B2178 45.358 -1.087 43.011 1.00 36.34 C
ATOM 8 O4' G B2178 45.414 0.336 42.912 1.00 36.41 O
ATOM 9 C3' G B2178 44.336 -1.295 44.066 1.00 36.19 C
ATOM 10 O3' G B2178 44.331 -2.604 44.538 1.00 36.09 O
ATOM 11 C2' G B2178 44.772 -0.266 45.091 1.00 36.10 C
ATOM 12 O2' G B2178 45.918 -0.723 45.788 1.00 35.99 O
ATOM 13 C1' G B2178 45.179 0.898 44.170 1.00 36.27 C
ATOM 14 N9 G B2178 44.082 1.839 44.039 1.00 36.35 N
ATOM 15 C8 G B2178 43.075 1.671 43.137 1.00 36.48 C
ATOM 16 N7 G B2178 42.120 2.522 43.299 1.00 36.53 N
ATOM 17 C5 G B2178 42.493 3.243 44.396 1.00 36.42 C
ATOM 18 C6 G B2178 41.801 4.310 44.988 1.00 36.44 C
ATOM 19 O6 G B2178 40.713 4.792 44.624 1.00 36.55 O
ATOM 20 N1 G B2178 42.530 4.801 46.068 1.00 36.33 N
ATOM 21 C2 G B2178 43.759 4.333 46.452 1.00 36.23 C
ATOM 22 N2 G B2178 44.297 4.985 47.490 1.00 36.15 N
ATOM 23 N3 G B2178 44.423 3.340 45.884 1.00 36.21 N
ATOM 24 C4 G B2178 43.719 2.849 44.864 1.00 36.31 C
ATOM 25 P A B2179 42.957 -3.311 44.947 1.00 33.81 P
ATOM 26 OP1 A B2179 43.195 -4.755 44.953 1.00 33.78 O
ATOM 27 OP2 A B2179 41.891 -2.780 44.079 1.00 33.96 O
ATOM 28 O5' A B2179 42.725 -2.813 46.391 1.00 33.65 O
TER
Atoms:
OP1: (53.174,1.253,40.947)
OP2: (53.249,0.454,38.570)
C3': (49.586,-2.384,41.307)
C1': (48.292,-1.786,39.421)
C5': (50.822,-0.220,41.275)
O6: (48.818,-1.832,33.526)
O4': (48.964,-0.629,39.849)
C8: (47.004,-2.099,37.250)
C2: (51.047,-1.228,36.116)
C6: (49.242,-1.694,34.657)
C5: (48.508,-1.809,35.827)
C4: (49.150,-1.631,37.032)
P: (52.479,0.844,39.735)
C4': (49.533,-0.890,41.159)
C2': (49.115,-2.927,39.942)
O2': (48.324,-4.099,40.012)
N1: (50.553,-1.391,34.869)
N2: (52.309,-0.907,36.098)
N3: (50.418,-1.329,37.268)
N7: (47.174,-2.107,35.964)
N9: (48.171,-1.793,37.961)
O5': (51.481,-0.264,40.073)
O3': (48.656,-2.722,42.258)
OP2: (53.249,0.454,38.570)
C3': (49.586,-2.384,41.307)
C1': (48.292,-1.786,39.421)
C5': (50.822,-0.220,41.275)
O6: (48.818,-1.832,33.526)
O4': (48.964,-0.629,39.849)
C8: (47.004,-2.099,37.250)
C2: (51.047,-1.228,36.116)
C6: (49.242,-1.694,34.657)
C5: (48.508,-1.809,35.827)
C4: (49.150,-1.631,37.032)
P: (52.479,0.844,39.735)
C4': (49.533,-0.890,41.159)
C2': (49.115,-2.927,39.942)
O2': (48.324,-4.099,40.012)
N1: (50.553,-1.391,34.869)
N2: (52.309,-0.907,36.098)
N3: (50.418,-1.329,37.268)
N7: (47.174,-2.107,35.964)
N9: (48.171,-1.793,37.961)
O5': (51.481,-0.264,40.073)
O3': (48.656,-2.722,42.258)
OP1: (43.699,-3.153,39.593)
OP2: (41.767,-1.585,39.839)
C3': (44.336,-1.295,44.066)
C1': (45.179,0.898,44.170)
C5': (45.065,-1.666,41.683)
O6: (40.713,4.792,44.624)
O4': (45.414,0.336,42.912)
C8: (43.075,1.671,43.137)
C2: (43.759,4.333,46.452)
C6: (41.801,4.310,44.988)
C5: (42.493,3.243,44.396)
C4: (43.719,2.849,44.864)
P: (43.213,-1.825,39.868)
C4': (45.358,-1.087,43.011)
C2': (44.772,-0.266,45.091)
O2': (45.918,-0.723,45.788)
N1: (42.530,4.801,46.068)
N2: (44.297,4.985,47.490)
N3: (44.423,3.340,45.884)
N7: (42.120,2.522,43.299)
N9: (44.082,1.839,44.039)
O5': (43.788,-1.282,41.234)
O3': (44.331,-2.604,44.538)
OP2: (41.767,-1.585,39.839)
C3': (44.336,-1.295,44.066)
C1': (45.179,0.898,44.170)
C5': (45.065,-1.666,41.683)
O6: (40.713,4.792,44.624)
O4': (45.414,0.336,42.912)
C8: (43.075,1.671,43.137)
C2: (43.759,4.333,46.452)
C6: (41.801,4.310,44.988)
C5: (42.493,3.243,44.396)
C4: (43.719,2.849,44.864)
P: (43.213,-1.825,39.868)
C4': (45.358,-1.087,43.011)
C2': (44.772,-0.266,45.091)
O2': (45.918,-0.723,45.788)
N1: (42.530,4.801,46.068)
N2: (44.297,4.985,47.490)
N3: (44.423,3.340,45.884)
N7: (42.120,2.522,43.299)
N9: (44.082,1.839,44.039)
O5': (43.788,-1.282,41.234)
O3': (44.331,-2.604,44.538)
Image (generated by PyMOL):