Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12079:12056
Extra
PDB:
ATOM 1 O3' A A2078 -19.635 -20.350 82.560 1.00 57.70 O
ATOM 2 P G A2079 -20.655 -21.155 81.592 1.00 58.94 P
ATOM 3 OP1 G A2079 -21.924 -21.340 82.359 1.00 59.34 O
ATOM 4 OP2 G A2079 -19.950 -22.349 81.080 1.00 58.79 O
ATOM 5 O5' G A2079 -20.883 -20.158 80.411 1.00 58.90 O
ATOM 6 C5' G A2079 -19.944 -20.063 79.390 1.00 58.60 C
ATOM 7 C4' G A2079 -19.029 -18.932 79.646 1.00 58.32 C
ATOM 8 O4' G A2079 -17.673 -19.417 79.577 1.00 57.98 O
ATOM 9 C3' G A2079 -19.123 -17.793 78.657 1.00 58.27 C
ATOM 10 O3' G A2079 -18.736 -16.606 79.314 1.00 58.16 O
ATOM 11 C2' G A2079 -18.054 -18.162 77.651 1.00 57.96 C
ATOM 12 O2' G A2079 -17.568 -17.075 76.913 1.00 57.78 O
ATOM 13 C1' G A2079 -16.979 -18.736 78.565 1.00 57.73 C
ATOM 14 N9 G A2079 -16.090 -19.692 77.915 1.00 57.52 N
ATOM 15 C8 G A2079 -14.734 -19.530 77.694 1.00 57.16 C
ATOM 16 N7 G A2079 -14.180 -20.550 77.077 1.00 57.06 N
ATOM 17 C5 G A2079 -15.239 -21.445 76.907 1.00 57.36 C
ATOM 18 C6 G A2079 -15.230 -22.720 76.274 1.00 57.42 C
ATOM 19 O6 G A2079 -14.230 -23.309 75.765 1.00 57.20 O
ATOM 20 N1 G A2079 -16.528 -23.283 76.304 1.00 57.79 N
ATOM 21 C2 G A2079 -17.641 -22.680 76.855 1.00 58.05 C
ATOM 22 N2 G A2079 -18.769 -23.374 76.775 1.00 58.39 N
ATOM 23 N3 G A2079 -17.648 -21.497 77.438 1.00 58.00 N
ATOM 24 C4 G A2079 -16.424 -20.942 77.431 1.00 57.65 C
ATOM 25 P G A2080 -19.809 -15.495 79.742 1.00 58.83 P
ATOM 26 OP1 G A2080 -19.906 -15.509 81.235 1.00 58.92 O
ATOM 27 OP2 G A2080 -21.043 -15.706 78.938 1.00 59.14 O
ATOM 28 O5' G A2080 -19.093 -14.168 79.268 1.00 58.60 O
TER
ATOM 1 O3' C B2055 -14.229 -15.749 78.017 1.00 56.17 O
ATOM 2 P G B2056 -14.489 -15.002 76.625 1.00 75.66 P
ATOM 3 OP1 G B2056 -13.363 -14.040 76.401 1.00 75.36 O
ATOM 4 OP2 G B2056 -15.876 -14.492 76.656 1.00 76.00 O
ATOM 5 O5' G B2056 -14.365 -16.211 75.615 1.00 75.63 O
ATOM 6 C5' G B2056 -15.008 -16.201 74.362 1.00 75.77 C
ATOM 7 C4' G B2056 -14.424 -17.254 73.475 1.00 75.64 C
ATOM 8 O4' G B2056 -14.141 -18.455 74.272 1.00 75.62 O
ATOM 9 C3' G B2056 -15.328 -17.838 72.421 1.00 75.89 C
ATOM 10 O3' G B2056 -15.811 -16.958 71.373 1.00 75.99 O
ATOM 11 C2' G B2056 -14.521 -19.076 72.067 1.00 75.73 C
ATOM 12 O2' G B2056 -13.193 -18.720 71.697 1.00 75.39 O
ATOM 13 C1' G B2056 -14.445 -19.607 73.490 1.00 75.74 C
ATOM 14 N9 G B2056 -15.782 -20.079 73.884 1.00 76.10 N
ATOM 15 C8 G B2056 -16.734 -19.449 74.645 1.00 76.33 C
ATOM 16 N7 G B2056 -17.880 -20.078 74.660 1.00 76.66 N
ATOM 17 C5 G B2056 -17.691 -21.166 73.834 1.00 76.65 C
ATOM 18 C6 G B2056 -18.572 -22.225 73.465 1.00 76.95 C
ATOM 19 O6 G B2056 -19.727 -22.403 73.818 1.00 77.27 O
ATOM 20 N1 G B2056 -18.020 -23.163 72.601 1.00 76.86 N
ATOM 21 C2 G B2056 -16.727 -23.072 72.158 1.00 76.52 C
ATOM 22 N2 G B2056 -16.359 -24.046 71.327 1.00 76.50 N
ATOM 23 N3 G B2056 -15.878 -22.095 72.491 1.00 76.23 N
ATOM 24 C4 G B2056 -16.412 -21.176 73.336 1.00 76.32 C
ATOM 25 P G B2057 -14.962 -16.568 70.081 1.00 77.33 P
ATOM 26 OP1 G B2057 -13.536 -16.365 70.518 1.00 77.13 O
ATOM 27 OP2 G B2057 -15.665 -15.448 69.444 1.00 77.38 O
ATOM 28 O5' G B2057 -15.094 -17.863 69.181 1.00 77.52 O
TER
ATOM 2 P G A2079 -20.655 -21.155 81.592 1.00 58.94 P
ATOM 3 OP1 G A2079 -21.924 -21.340 82.359 1.00 59.34 O
ATOM 4 OP2 G A2079 -19.950 -22.349 81.080 1.00 58.79 O
ATOM 5 O5' G A2079 -20.883 -20.158 80.411 1.00 58.90 O
ATOM 6 C5' G A2079 -19.944 -20.063 79.390 1.00 58.60 C
ATOM 7 C4' G A2079 -19.029 -18.932 79.646 1.00 58.32 C
ATOM 8 O4' G A2079 -17.673 -19.417 79.577 1.00 57.98 O
ATOM 9 C3' G A2079 -19.123 -17.793 78.657 1.00 58.27 C
ATOM 10 O3' G A2079 -18.736 -16.606 79.314 1.00 58.16 O
ATOM 11 C2' G A2079 -18.054 -18.162 77.651 1.00 57.96 C
ATOM 12 O2' G A2079 -17.568 -17.075 76.913 1.00 57.78 O
ATOM 13 C1' G A2079 -16.979 -18.736 78.565 1.00 57.73 C
ATOM 14 N9 G A2079 -16.090 -19.692 77.915 1.00 57.52 N
ATOM 15 C8 G A2079 -14.734 -19.530 77.694 1.00 57.16 C
ATOM 16 N7 G A2079 -14.180 -20.550 77.077 1.00 57.06 N
ATOM 17 C5 G A2079 -15.239 -21.445 76.907 1.00 57.36 C
ATOM 18 C6 G A2079 -15.230 -22.720 76.274 1.00 57.42 C
ATOM 19 O6 G A2079 -14.230 -23.309 75.765 1.00 57.20 O
ATOM 20 N1 G A2079 -16.528 -23.283 76.304 1.00 57.79 N
ATOM 21 C2 G A2079 -17.641 -22.680 76.855 1.00 58.05 C
ATOM 22 N2 G A2079 -18.769 -23.374 76.775 1.00 58.39 N
ATOM 23 N3 G A2079 -17.648 -21.497 77.438 1.00 58.00 N
ATOM 24 C4 G A2079 -16.424 -20.942 77.431 1.00 57.65 C
ATOM 25 P G A2080 -19.809 -15.495 79.742 1.00 58.83 P
ATOM 26 OP1 G A2080 -19.906 -15.509 81.235 1.00 58.92 O
ATOM 27 OP2 G A2080 -21.043 -15.706 78.938 1.00 59.14 O
ATOM 28 O5' G A2080 -19.093 -14.168 79.268 1.00 58.60 O
TER
ATOM 1 O3' C B2055 -14.229 -15.749 78.017 1.00 56.17 O
ATOM 2 P G B2056 -14.489 -15.002 76.625 1.00 75.66 P
ATOM 3 OP1 G B2056 -13.363 -14.040 76.401 1.00 75.36 O
ATOM 4 OP2 G B2056 -15.876 -14.492 76.656 1.00 76.00 O
ATOM 5 O5' G B2056 -14.365 -16.211 75.615 1.00 75.63 O
ATOM 6 C5' G B2056 -15.008 -16.201 74.362 1.00 75.77 C
ATOM 7 C4' G B2056 -14.424 -17.254 73.475 1.00 75.64 C
ATOM 8 O4' G B2056 -14.141 -18.455 74.272 1.00 75.62 O
ATOM 9 C3' G B2056 -15.328 -17.838 72.421 1.00 75.89 C
ATOM 10 O3' G B2056 -15.811 -16.958 71.373 1.00 75.99 O
ATOM 11 C2' G B2056 -14.521 -19.076 72.067 1.00 75.73 C
ATOM 12 O2' G B2056 -13.193 -18.720 71.697 1.00 75.39 O
ATOM 13 C1' G B2056 -14.445 -19.607 73.490 1.00 75.74 C
ATOM 14 N9 G B2056 -15.782 -20.079 73.884 1.00 76.10 N
ATOM 15 C8 G B2056 -16.734 -19.449 74.645 1.00 76.33 C
ATOM 16 N7 G B2056 -17.880 -20.078 74.660 1.00 76.66 N
ATOM 17 C5 G B2056 -17.691 -21.166 73.834 1.00 76.65 C
ATOM 18 C6 G B2056 -18.572 -22.225 73.465 1.00 76.95 C
ATOM 19 O6 G B2056 -19.727 -22.403 73.818 1.00 77.27 O
ATOM 20 N1 G B2056 -18.020 -23.163 72.601 1.00 76.86 N
ATOM 21 C2 G B2056 -16.727 -23.072 72.158 1.00 76.52 C
ATOM 22 N2 G B2056 -16.359 -24.046 71.327 1.00 76.50 N
ATOM 23 N3 G B2056 -15.878 -22.095 72.491 1.00 76.23 N
ATOM 24 C4 G B2056 -16.412 -21.176 73.336 1.00 76.32 C
ATOM 25 P G B2057 -14.962 -16.568 70.081 1.00 77.33 P
ATOM 26 OP1 G B2057 -13.536 -16.365 70.518 1.00 77.13 O
ATOM 27 OP2 G B2057 -15.665 -15.448 69.444 1.00 77.38 O
ATOM 28 O5' G B2057 -15.094 -17.863 69.181 1.00 77.52 O
TER
Atoms:
OP1: (-21.924,-21.340,82.359)
OP2: (-19.950,-22.349,81.080)
C3': (-19.123,-17.793,78.657)
C1': (-16.979,-18.736,78.565)
C5': (-19.944,-20.063,79.390)
O6: (-14.230,-23.309,75.765)
O4': (-17.673,-19.417,79.577)
C8: (-14.734,-19.530,77.694)
C2: (-17.641,-22.680,76.855)
C6: (-15.230,-22.720,76.274)
C5: (-15.239,-21.445,76.907)
C4: (-16.424,-20.942,77.431)
P: (-20.655,-21.155,81.592)
C4': (-19.029,-18.932,79.646)
C2': (-18.054,-18.162,77.651)
O2': (-17.568,-17.075,76.913)
N1: (-16.528,-23.283,76.304)
N2: (-18.769,-23.374,76.775)
N3: (-17.648,-21.497,77.438)
N7: (-14.180,-20.550,77.077)
N9: (-16.090,-19.692,77.915)
O5': (-20.883,-20.158,80.411)
O3': (-18.736,-16.606,79.314)
OP2: (-19.950,-22.349,81.080)
C3': (-19.123,-17.793,78.657)
C1': (-16.979,-18.736,78.565)
C5': (-19.944,-20.063,79.390)
O6: (-14.230,-23.309,75.765)
O4': (-17.673,-19.417,79.577)
C8: (-14.734,-19.530,77.694)
C2: (-17.641,-22.680,76.855)
C6: (-15.230,-22.720,76.274)
C5: (-15.239,-21.445,76.907)
C4: (-16.424,-20.942,77.431)
P: (-20.655,-21.155,81.592)
C4': (-19.029,-18.932,79.646)
C2': (-18.054,-18.162,77.651)
O2': (-17.568,-17.075,76.913)
N1: (-16.528,-23.283,76.304)
N2: (-18.769,-23.374,76.775)
N3: (-17.648,-21.497,77.438)
N7: (-14.180,-20.550,77.077)
N9: (-16.090,-19.692,77.915)
O5': (-20.883,-20.158,80.411)
O3': (-18.736,-16.606,79.314)
OP1: (-13.363,-14.040,76.401)
OP2: (-15.876,-14.492,76.656)
C3': (-15.328,-17.838,72.421)
C1': (-14.445,-19.607,73.490)
C5': (-15.008,-16.201,74.362)
O6: (-19.727,-22.403,73.818)
O4': (-14.141,-18.455,74.272)
C8: (-16.734,-19.449,74.645)
C2: (-16.727,-23.072,72.158)
C6: (-18.572,-22.225,73.465)
C5: (-17.691,-21.166,73.834)
C4: (-16.412,-21.176,73.336)
P: (-14.489,-15.002,76.625)
C4': (-14.424,-17.254,73.475)
C2': (-14.521,-19.076,72.067)
O2': (-13.193,-18.720,71.697)
N1: (-18.020,-23.163,72.601)
N2: (-16.359,-24.046,71.327)
N3: (-15.878,-22.095,72.491)
N7: (-17.880,-20.078,74.660)
N9: (-15.782,-20.079,73.884)
O5': (-14.365,-16.211,75.615)
O3': (-15.811,-16.958,71.373)
OP2: (-15.876,-14.492,76.656)
C3': (-15.328,-17.838,72.421)
C1': (-14.445,-19.607,73.490)
C5': (-15.008,-16.201,74.362)
O6: (-19.727,-22.403,73.818)
O4': (-14.141,-18.455,74.272)
C8: (-16.734,-19.449,74.645)
C2: (-16.727,-23.072,72.158)
C6: (-18.572,-22.225,73.465)
C5: (-17.691,-21.166,73.834)
C4: (-16.412,-21.176,73.336)
P: (-14.489,-15.002,76.625)
C4': (-14.424,-17.254,73.475)
C2': (-14.521,-19.076,72.067)
O2': (-13.193,-18.720,71.697)
N1: (-18.020,-23.163,72.601)
N2: (-16.359,-24.046,71.327)
N3: (-15.878,-22.095,72.491)
N7: (-17.880,-20.078,74.660)
N9: (-15.782,-20.079,73.884)
O5': (-14.365,-16.211,75.615)
O3': (-15.811,-16.958,71.373)
Image (generated by PyMOL):