Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12210:12623
Extra
PDB:
ATOM 1 O3' A A2209 38.846 0.163 72.321 1.00 83.26 O
ATOM 2 P G A2210 37.484 -0.715 72.287 1.00 96.76 P
ATOM 3 OP1 G A2210 36.827 -0.540 73.602 1.00 96.84 O
ATOM 4 OP2 G A2210 37.840 -2.116 71.828 1.00 96.66 O
ATOM 5 O5' G A2210 36.639 0.021 71.136 1.00 96.78 O
ATOM 6 C5' G A2210 35.708 1.067 71.424 1.00 96.88 C
ATOM 7 C4' G A2210 34.276 0.570 71.341 1.00 96.89 C
ATOM 8 O4' G A2210 33.601 1.244 70.241 1.00 96.93 O
ATOM 9 C3' G A2210 34.135 -0.924 71.052 1.00 96.80 C
ATOM 10 O3' G A2210 33.828 -1.761 72.218 1.00 96.81 O
ATOM 11 C2' G A2210 33.039 -1.047 69.985 1.00 96.81 C
ATOM 12 O2' G A2210 31.938 -1.841 70.365 1.00 96.83 O
ATOM 13 C1' G A2210 32.611 0.386 69.686 1.00 96.90 C
ATOM 14 N9 G A2210 32.513 0.620 68.241 1.00 96.90 N
ATOM 15 C8 G A2210 33.612 0.519 67.415 1.00 96.83 C
ATOM 16 N7 G A2210 33.325 0.671 66.155 1.00 96.85 N
ATOM 17 C5 G A2210 31.944 0.849 66.125 1.00 96.92 C
ATOM 18 C6 G A2210 31.102 1.063 64.992 1.00 96.99 C
ATOM 19 O6 G A2210 31.472 1.123 63.801 1.00 96.99 O
ATOM 20 N1 G A2210 29.756 1.193 65.375 1.00 97.07 N
ATOM 21 C2 G A2210 29.280 1.131 66.680 1.00 97.10 C
ATOM 22 N2 G A2210 27.951 1.287 66.849 1.00 97.20 N
ATOM 23 N3 G A2210 30.076 0.935 67.741 1.00 97.04 N
ATOM 24 C4 G A2210 31.400 0.796 67.408 1.00 96.95 C
ATOM 25 P A A2211 33.157 -1.228 73.594 1.00138.28 P
ATOM 26 OP1 A A2211 34.074 -0.231 74.198 1.00138.34 O
ATOM 27 OP2 A A2211 32.823 -2.435 74.387 1.00138.28 O
ATOM 28 O5' A A2211 31.824 -0.525 73.100 1.00138.36 O
TER
ATOM 1 O3' C B2622 36.991 -1.123 67.314 1.00 55.34 O
ATOM 2 P G B2623 38.471 -1.542 67.928 1.00 87.03 P
ATOM 3 OP1 G B2623 39.441 -1.584 66.798 1.00 87.00 O
ATOM 4 OP2 G B2623 38.278 -2.782 68.777 1.00 87.00 O
ATOM 5 O5' G B2623 38.816 -0.320 68.879 1.00 87.11 O
ATOM 6 C5' G B2623 39.064 0.974 68.364 1.00 87.17 C
ATOM 7 C4' G B2623 40.196 1.667 69.104 1.00 87.21 C
ATOM 8 O4' G B2623 41.073 0.675 69.676 1.00 87.16 O
ATOM 9 C3' G B2623 41.084 2.589 68.255 1.00 87.25 C
ATOM 10 O3' G B2623 40.684 3.959 68.351 1.00 87.36 O
ATOM 11 C2' G B2623 42.522 2.341 68.749 1.00 87.24 C
ATOM 12 O2' G B2623 42.990 3.416 69.566 1.00 87.34 O
ATOM 13 C1' G B2623 42.408 1.072 69.600 1.00 87.17 C
ATOM 14 N9 G B2623 43.213 -0.056 69.079 1.00 87.09 N
ATOM 15 C8 G B2623 42.958 -1.027 68.111 1.00 87.02 C
ATOM 16 N7 G B2623 43.931 -1.886 67.961 1.00 86.98 N
ATOM 17 C5 G B2623 44.883 -1.437 68.901 1.00 87.03 C
ATOM 18 C6 G B2623 46.181 -1.927 69.247 1.00 87.03 C
ATOM 19 O6 G B2623 46.754 -2.914 68.742 1.00 86.99 O
ATOM 20 N1 G B2623 46.782 -1.166 70.278 1.00 87.11 N
ATOM 21 C2 G B2623 46.215 -0.058 70.887 1.00 87.18 C
ATOM 22 N2 G B2623 46.907 0.588 71.839 1.00 87.27 N
ATOM 23 N3 G B2623 45.031 0.399 70.580 1.00 87.18 N
ATOM 24 C4 G B2623 44.447 -0.326 69.595 1.00 87.10 C
ATOM 25 P A B2624 40.158 4.776 67.069 1.00107.36 P
ATOM 26 OP1 A B2624 40.753 4.150 65.860 1.00107.29 O
ATOM 27 OP2 A B2624 40.427 6.224 67.331 1.00107.49 O
ATOM 28 O5' A B2624 38.590 4.500 67.108 1.00107.37 O
TER
ATOM 2 P G A2210 37.484 -0.715 72.287 1.00 96.76 P
ATOM 3 OP1 G A2210 36.827 -0.540 73.602 1.00 96.84 O
ATOM 4 OP2 G A2210 37.840 -2.116 71.828 1.00 96.66 O
ATOM 5 O5' G A2210 36.639 0.021 71.136 1.00 96.78 O
ATOM 6 C5' G A2210 35.708 1.067 71.424 1.00 96.88 C
ATOM 7 C4' G A2210 34.276 0.570 71.341 1.00 96.89 C
ATOM 8 O4' G A2210 33.601 1.244 70.241 1.00 96.93 O
ATOM 9 C3' G A2210 34.135 -0.924 71.052 1.00 96.80 C
ATOM 10 O3' G A2210 33.828 -1.761 72.218 1.00 96.81 O
ATOM 11 C2' G A2210 33.039 -1.047 69.985 1.00 96.81 C
ATOM 12 O2' G A2210 31.938 -1.841 70.365 1.00 96.83 O
ATOM 13 C1' G A2210 32.611 0.386 69.686 1.00 96.90 C
ATOM 14 N9 G A2210 32.513 0.620 68.241 1.00 96.90 N
ATOM 15 C8 G A2210 33.612 0.519 67.415 1.00 96.83 C
ATOM 16 N7 G A2210 33.325 0.671 66.155 1.00 96.85 N
ATOM 17 C5 G A2210 31.944 0.849 66.125 1.00 96.92 C
ATOM 18 C6 G A2210 31.102 1.063 64.992 1.00 96.99 C
ATOM 19 O6 G A2210 31.472 1.123 63.801 1.00 96.99 O
ATOM 20 N1 G A2210 29.756 1.193 65.375 1.00 97.07 N
ATOM 21 C2 G A2210 29.280 1.131 66.680 1.00 97.10 C
ATOM 22 N2 G A2210 27.951 1.287 66.849 1.00 97.20 N
ATOM 23 N3 G A2210 30.076 0.935 67.741 1.00 97.04 N
ATOM 24 C4 G A2210 31.400 0.796 67.408 1.00 96.95 C
ATOM 25 P A A2211 33.157 -1.228 73.594 1.00138.28 P
ATOM 26 OP1 A A2211 34.074 -0.231 74.198 1.00138.34 O
ATOM 27 OP2 A A2211 32.823 -2.435 74.387 1.00138.28 O
ATOM 28 O5' A A2211 31.824 -0.525 73.100 1.00138.36 O
TER
ATOM 1 O3' C B2622 36.991 -1.123 67.314 1.00 55.34 O
ATOM 2 P G B2623 38.471 -1.542 67.928 1.00 87.03 P
ATOM 3 OP1 G B2623 39.441 -1.584 66.798 1.00 87.00 O
ATOM 4 OP2 G B2623 38.278 -2.782 68.777 1.00 87.00 O
ATOM 5 O5' G B2623 38.816 -0.320 68.879 1.00 87.11 O
ATOM 6 C5' G B2623 39.064 0.974 68.364 1.00 87.17 C
ATOM 7 C4' G B2623 40.196 1.667 69.104 1.00 87.21 C
ATOM 8 O4' G B2623 41.073 0.675 69.676 1.00 87.16 O
ATOM 9 C3' G B2623 41.084 2.589 68.255 1.00 87.25 C
ATOM 10 O3' G B2623 40.684 3.959 68.351 1.00 87.36 O
ATOM 11 C2' G B2623 42.522 2.341 68.749 1.00 87.24 C
ATOM 12 O2' G B2623 42.990 3.416 69.566 1.00 87.34 O
ATOM 13 C1' G B2623 42.408 1.072 69.600 1.00 87.17 C
ATOM 14 N9 G B2623 43.213 -0.056 69.079 1.00 87.09 N
ATOM 15 C8 G B2623 42.958 -1.027 68.111 1.00 87.02 C
ATOM 16 N7 G B2623 43.931 -1.886 67.961 1.00 86.98 N
ATOM 17 C5 G B2623 44.883 -1.437 68.901 1.00 87.03 C
ATOM 18 C6 G B2623 46.181 -1.927 69.247 1.00 87.03 C
ATOM 19 O6 G B2623 46.754 -2.914 68.742 1.00 86.99 O
ATOM 20 N1 G B2623 46.782 -1.166 70.278 1.00 87.11 N
ATOM 21 C2 G B2623 46.215 -0.058 70.887 1.00 87.18 C
ATOM 22 N2 G B2623 46.907 0.588 71.839 1.00 87.27 N
ATOM 23 N3 G B2623 45.031 0.399 70.580 1.00 87.18 N
ATOM 24 C4 G B2623 44.447 -0.326 69.595 1.00 87.10 C
ATOM 25 P A B2624 40.158 4.776 67.069 1.00107.36 P
ATOM 26 OP1 A B2624 40.753 4.150 65.860 1.00107.29 O
ATOM 27 OP2 A B2624 40.427 6.224 67.331 1.00107.49 O
ATOM 28 O5' A B2624 38.590 4.500 67.108 1.00107.37 O
TER
Atoms:
OP1: (36.827,-0.540,73.602)
OP2: (37.840,-2.116,71.828)
C3': (34.135,-0.924,71.052)
C1': (32.611,0.386,69.686)
C5': (35.708,1.067,71.424)
O6: (31.472,1.123,63.801)
O4': (33.601,1.244,70.241)
C8: (33.612,0.519,67.415)
C2: (29.280,1.131,66.680)
C6: (31.102,1.063,64.992)
C5: (31.944,0.849,66.125)
C4: (31.400,0.796,67.408)
P: (37.484,-0.715,72.287)
C4': (34.276,0.570,71.341)
C2': (33.039,-1.047,69.985)
O2': (31.938,-1.841,70.365)
N1: (29.756,1.193,65.375)
N2: (27.951,1.287,66.849)
N3: (30.076,0.935,67.741)
N7: (33.325,0.671,66.155)
N9: (32.513,0.620,68.241)
O5': (36.639,0.021,71.136)
O3': (33.828,-1.761,72.218)
OP2: (37.840,-2.116,71.828)
C3': (34.135,-0.924,71.052)
C1': (32.611,0.386,69.686)
C5': (35.708,1.067,71.424)
O6: (31.472,1.123,63.801)
O4': (33.601,1.244,70.241)
C8: (33.612,0.519,67.415)
C2: (29.280,1.131,66.680)
C6: (31.102,1.063,64.992)
C5: (31.944,0.849,66.125)
C4: (31.400,0.796,67.408)
P: (37.484,-0.715,72.287)
C4': (34.276,0.570,71.341)
C2': (33.039,-1.047,69.985)
O2': (31.938,-1.841,70.365)
N1: (29.756,1.193,65.375)
N2: (27.951,1.287,66.849)
N3: (30.076,0.935,67.741)
N7: (33.325,0.671,66.155)
N9: (32.513,0.620,68.241)
O5': (36.639,0.021,71.136)
O3': (33.828,-1.761,72.218)
OP1: (39.441,-1.584,66.798)
OP2: (38.278,-2.782,68.777)
C3': (41.084,2.589,68.255)
C1': (42.408,1.072,69.600)
C5': (39.064,0.974,68.364)
O6: (46.754,-2.914,68.742)
O4': (41.073,0.675,69.676)
C8: (42.958,-1.027,68.111)
C2: (46.215,-0.058,70.887)
C6: (46.181,-1.927,69.247)
C5: (44.883,-1.437,68.901)
C4: (44.447,-0.326,69.595)
P: (38.471,-1.542,67.928)
C4': (40.196,1.667,69.104)
C2': (42.522,2.341,68.749)
O2': (42.990,3.416,69.566)
N1: (46.782,-1.166,70.278)
N2: (46.907,0.588,71.839)
N3: (45.031,0.399,70.580)
N7: (43.931,-1.886,67.961)
N9: (43.213,-0.056,69.079)
O5': (38.816,-0.320,68.879)
O3': (40.684,3.959,68.351)
OP2: (38.278,-2.782,68.777)
C3': (41.084,2.589,68.255)
C1': (42.408,1.072,69.600)
C5': (39.064,0.974,68.364)
O6: (46.754,-2.914,68.742)
O4': (41.073,0.675,69.676)
C8: (42.958,-1.027,68.111)
C2: (46.215,-0.058,70.887)
C6: (46.181,-1.927,69.247)
C5: (44.883,-1.437,68.901)
C4: (44.447,-0.326,69.595)
P: (38.471,-1.542,67.928)
C4': (40.196,1.667,69.104)
C2': (42.522,2.341,68.749)
O2': (42.990,3.416,69.566)
N1: (46.782,-1.166,70.278)
N2: (46.907,0.588,71.839)
N3: (45.031,0.399,70.580)
N7: (43.931,-1.886,67.961)
N9: (43.213,-0.056,69.079)
O5': (38.816,-0.320,68.879)
O3': (40.684,3.959,68.351)
Image (generated by PyMOL):