Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12529:12530
Extra
PDB:
ATOM 1 O3' C A2528 45.265 -61.650 102.429 1.00 47.14 O
ATOM 2 P G A2529 45.987 -62.638 103.392 1.00 67.05 P
ATOM 3 OP1 G A2529 45.733 -64.012 102.901 1.00 67.38 O
ATOM 4 OP2 G A2529 45.546 -62.316 104.695 1.00 67.22 O
ATOM 5 O5' G A2529 47.520 -62.250 103.206 1.00 66.98 O
ATOM 6 C5' G A2529 48.482 -62.582 104.197 1.00 67.39 C
ATOM 7 C4' G A2529 49.866 -62.162 103.791 1.00 67.26 C
ATOM 8 O4' G A2529 50.010 -62.435 102.392 1.00 67.05 O
ATOM 9 C3' G A2529 50.219 -60.671 103.920 1.00 66.84 C
ATOM 10 O3' G A2529 50.677 -60.283 105.179 1.00 67.06 O
ATOM 11 C2' G A2529 51.254 -60.470 102.826 1.00 66.62 C
ATOM 12 O2' G A2529 52.542 -60.941 103.206 1.00 66.97 O
ATOM 13 C1' G A2529 50.711 -61.390 101.767 1.00 66.63 C
ATOM 14 N9 G A2529 49.778 -60.678 100.990 1.00 66.16 N
ATOM 15 C8 G A2529 49.073 -59.689 101.613 1.00 65.93 C
ATOM 16 N7 G A2529 48.268 -59.085 100.912 1.00 65.54 N
ATOM 17 C5 G A2529 48.619 -59.812 99.842 1.00 65.56 C
ATOM 18 C6 G A2529 48.038 -59.454 98.871 1.00 65.22 C
ATOM 19 O6 G A2529 47.301 -58.545 99.254 1.00 64.97 O
ATOM 20 N1 G A2529 48.346 -60.144 97.702 1.00 65.23 N
ATOM 21 C2 G A2529 49.186 -61.134 97.569 1.00 65.57 C
ATOM 22 N2 G A2529 49.238 -61.596 96.324 1.00 65.49 N
ATOM 23 N3 G A2529 49.870 -61.561 98.638 1.00 65.97 N
ATOM 24 C4 G A2529 49.492 -60.786 99.710 1.00 65.91 C
ATOM 25 P G A2530 49.837 -60.648 106.454 1.00 47.00 P
ATOM 26 OP1 G A2530 48.488 -60.647 106.053 1.00 46.80 O
ATOM 27 OP2 G A2530 50.240 -59.730 107.539 1.00 47.02 O
ATOM 28 O5' G A2530 50.326 -62.115 106.761 1.00 47.59 O
TER
ATOM 1 O3' G B2529 50.677 -60.283 105.179 1.00 67.06 O
ATOM 2 P G B2530 49.837 -60.648 106.454 1.00 47.00 P
ATOM 3 OP1 G B2530 48.488 -60.647 106.053 1.00 46.80 O
ATOM 4 OP2 G B2530 50.240 -59.730 107.539 1.00 47.02 O
ATOM 5 O5' G B2530 50.326 -62.115 106.761 1.00 47.59 O
ATOM 6 C5' G B2530 51.708 -62.436 106.695 1.00 47.79 C
ATOM 7 C4' G B2530 52.005 -63.663 107.493 1.00 48.43 C
ATOM 8 O4' G B2530 51.686 -63.406 108.883 1.00 48.67 O
ATOM 9 C3' G B2530 51.159 -64.873 107.149 1.00 48.67 C
ATOM 10 O3' G B2530 51.626 -65.594 106.030 1.00 48.69 O
ATOM 11 C2' G B2530 51.183 -65.671 108.432 1.00 49.28 C
ATOM 12 O2' G B2530 52.416 -66.383 108.553 1.00 49.67 O
ATOM 13 C1' G B2530 51.155 -64.565 109.466 1.00 49.17 C
ATOM 14 N9 G B2530 49.803 -64.278 109.985 1.00 49.09 N
ATOM 15 C8 G B2530 49.147 -63.078 110.068 1.00 48.66 C
ATOM 16 N7 G B2530 48.009 -63.158 110.703 1.00 48.76 N
ATOM 17 C5 G B2530 47.943 -64.497 111.087 1.00 49.31 C
ATOM 18 C6 G B2530 46.951 -65.233 111.797 1.00 49.68 C
ATOM 19 O6 G B2530 45.883 -64.843 112.285 1.00 49.60 O
ATOM 20 N1 G B2530 47.271 -66.567 111.969 1.00 50.21 N
ATOM 21 C2 G B2530 48.411 -67.146 111.491 1.00 50.37 C
ATOM 22 N2 G B2530 48.564 -68.461 111.741 1.00 50.92 N
ATOM 23 N3 G B2530 49.316 -66.478 110.801 1.00 50.02 N
ATOM 24 C4 G B2530 49.027 -65.182 110.647 1.00 49.51 C
ATOM 25 P A B2531 50.567 -66.177 104.994 1.00 65.80 P
ATOM 26 OP1 A B2531 51.148 -66.004 103.656 1.00 65.48 O
ATOM 27 OP2 A B2531 49.289 -65.522 105.308 1.00 65.55 O
ATOM 28 O5' A B2531 50.466 -67.729 105.353 1.00 66.43 O
TER
ATOM 2 P G A2529 45.987 -62.638 103.392 1.00 67.05 P
ATOM 3 OP1 G A2529 45.733 -64.012 102.901 1.00 67.38 O
ATOM 4 OP2 G A2529 45.546 -62.316 104.695 1.00 67.22 O
ATOM 5 O5' G A2529 47.520 -62.250 103.206 1.00 66.98 O
ATOM 6 C5' G A2529 48.482 -62.582 104.197 1.00 67.39 C
ATOM 7 C4' G A2529 49.866 -62.162 103.791 1.00 67.26 C
ATOM 8 O4' G A2529 50.010 -62.435 102.392 1.00 67.05 O
ATOM 9 C3' G A2529 50.219 -60.671 103.920 1.00 66.84 C
ATOM 10 O3' G A2529 50.677 -60.283 105.179 1.00 67.06 O
ATOM 11 C2' G A2529 51.254 -60.470 102.826 1.00 66.62 C
ATOM 12 O2' G A2529 52.542 -60.941 103.206 1.00 66.97 O
ATOM 13 C1' G A2529 50.711 -61.390 101.767 1.00 66.63 C
ATOM 14 N9 G A2529 49.778 -60.678 100.990 1.00 66.16 N
ATOM 15 C8 G A2529 49.073 -59.689 101.613 1.00 65.93 C
ATOM 16 N7 G A2529 48.268 -59.085 100.912 1.00 65.54 N
ATOM 17 C5 G A2529 48.619 -59.812 99.842 1.00 65.56 C
ATOM 18 C6 G A2529 48.038 -59.454 98.871 1.00 65.22 C
ATOM 19 O6 G A2529 47.301 -58.545 99.254 1.00 64.97 O
ATOM 20 N1 G A2529 48.346 -60.144 97.702 1.00 65.23 N
ATOM 21 C2 G A2529 49.186 -61.134 97.569 1.00 65.57 C
ATOM 22 N2 G A2529 49.238 -61.596 96.324 1.00 65.49 N
ATOM 23 N3 G A2529 49.870 -61.561 98.638 1.00 65.97 N
ATOM 24 C4 G A2529 49.492 -60.786 99.710 1.00 65.91 C
ATOM 25 P G A2530 49.837 -60.648 106.454 1.00 47.00 P
ATOM 26 OP1 G A2530 48.488 -60.647 106.053 1.00 46.80 O
ATOM 27 OP2 G A2530 50.240 -59.730 107.539 1.00 47.02 O
ATOM 28 O5' G A2530 50.326 -62.115 106.761 1.00 47.59 O
TER
ATOM 1 O3' G B2529 50.677 -60.283 105.179 1.00 67.06 O
ATOM 2 P G B2530 49.837 -60.648 106.454 1.00 47.00 P
ATOM 3 OP1 G B2530 48.488 -60.647 106.053 1.00 46.80 O
ATOM 4 OP2 G B2530 50.240 -59.730 107.539 1.00 47.02 O
ATOM 5 O5' G B2530 50.326 -62.115 106.761 1.00 47.59 O
ATOM 6 C5' G B2530 51.708 -62.436 106.695 1.00 47.79 C
ATOM 7 C4' G B2530 52.005 -63.663 107.493 1.00 48.43 C
ATOM 8 O4' G B2530 51.686 -63.406 108.883 1.00 48.67 O
ATOM 9 C3' G B2530 51.159 -64.873 107.149 1.00 48.67 C
ATOM 10 O3' G B2530 51.626 -65.594 106.030 1.00 48.69 O
ATOM 11 C2' G B2530 51.183 -65.671 108.432 1.00 49.28 C
ATOM 12 O2' G B2530 52.416 -66.383 108.553 1.00 49.67 O
ATOM 13 C1' G B2530 51.155 -64.565 109.466 1.00 49.17 C
ATOM 14 N9 G B2530 49.803 -64.278 109.985 1.00 49.09 N
ATOM 15 C8 G B2530 49.147 -63.078 110.068 1.00 48.66 C
ATOM 16 N7 G B2530 48.009 -63.158 110.703 1.00 48.76 N
ATOM 17 C5 G B2530 47.943 -64.497 111.087 1.00 49.31 C
ATOM 18 C6 G B2530 46.951 -65.233 111.797 1.00 49.68 C
ATOM 19 O6 G B2530 45.883 -64.843 112.285 1.00 49.60 O
ATOM 20 N1 G B2530 47.271 -66.567 111.969 1.00 50.21 N
ATOM 21 C2 G B2530 48.411 -67.146 111.491 1.00 50.37 C
ATOM 22 N2 G B2530 48.564 -68.461 111.741 1.00 50.92 N
ATOM 23 N3 G B2530 49.316 -66.478 110.801 1.00 50.02 N
ATOM 24 C4 G B2530 49.027 -65.182 110.647 1.00 49.51 C
ATOM 25 P A B2531 50.567 -66.177 104.994 1.00 65.80 P
ATOM 26 OP1 A B2531 51.148 -66.004 103.656 1.00 65.48 O
ATOM 27 OP2 A B2531 49.289 -65.522 105.308 1.00 65.55 O
ATOM 28 O5' A B2531 50.466 -67.729 105.353 1.00 66.43 O
TER
Atoms:
OP1: (45.733,-64.012,102.901)
OP2: (45.546,-62.316,104.695)
C3': (50.219,-60.671,103.920)
C1': (50.711,-61.390,101.767)
C5': (48.482,-62.582,104.197)
O6: (47.301,-58.545,99.254)
O4': (50.010,-62.435,102.392)
C8: (49.073,-59.689,101.613)
C2: (49.186,-61.134,97.569)
C6: (48.038,-59.454,98.871)
C5: (48.619,-59.812,99.842)
C4: (49.492,-60.786,99.710)
P: (45.987,-62.638,103.392)
C4': (49.866,-62.162,103.791)
C2': (51.254,-60.470,102.826)
O2': (52.542,-60.941,103.206)
N1: (48.346,-60.144,97.702)
N2: (49.238,-61.596,96.324)
N3: (49.870,-61.561,98.638)
N7: (48.268,-59.085,100.912)
N9: (49.778,-60.678,100.990)
O5': (47.520,-62.250,103.206)
O3': (50.677,-60.283,105.179)
OP2: (45.546,-62.316,104.695)
C3': (50.219,-60.671,103.920)
C1': (50.711,-61.390,101.767)
C5': (48.482,-62.582,104.197)
O6: (47.301,-58.545,99.254)
O4': (50.010,-62.435,102.392)
C8: (49.073,-59.689,101.613)
C2: (49.186,-61.134,97.569)
C6: (48.038,-59.454,98.871)
C5: (48.619,-59.812,99.842)
C4: (49.492,-60.786,99.710)
P: (45.987,-62.638,103.392)
C4': (49.866,-62.162,103.791)
C2': (51.254,-60.470,102.826)
O2': (52.542,-60.941,103.206)
N1: (48.346,-60.144,97.702)
N2: (49.238,-61.596,96.324)
N3: (49.870,-61.561,98.638)
N7: (48.268,-59.085,100.912)
N9: (49.778,-60.678,100.990)
O5': (47.520,-62.250,103.206)
O3': (50.677,-60.283,105.179)
OP1: (48.488,-60.647,106.053)
OP2: (50.240,-59.730,107.539)
C3': (51.159,-64.873,107.149)
C1': (51.155,-64.565,109.466)
C5': (51.708,-62.436,106.695)
O6: (45.883,-64.843,112.285)
O4': (51.686,-63.406,108.883)
C8: (49.147,-63.078,110.068)
C2: (48.411,-67.146,111.491)
C6: (46.951,-65.233,111.797)
C5: (47.943,-64.497,111.087)
C4: (49.027,-65.182,110.647)
P: (49.837,-60.648,106.454)
C4': (52.005,-63.663,107.493)
C2': (51.183,-65.671,108.432)
O2': (52.416,-66.383,108.553)
N1: (47.271,-66.567,111.969)
N2: (48.564,-68.461,111.741)
N3: (49.316,-66.478,110.801)
N7: (48.009,-63.158,110.703)
N9: (49.803,-64.278,109.985)
O5': (50.326,-62.115,106.761)
O3': (51.626,-65.594,106.030)
OP2: (50.240,-59.730,107.539)
C3': (51.159,-64.873,107.149)
C1': (51.155,-64.565,109.466)
C5': (51.708,-62.436,106.695)
O6: (45.883,-64.843,112.285)
O4': (51.686,-63.406,108.883)
C8: (49.147,-63.078,110.068)
C2: (48.411,-67.146,111.491)
C6: (46.951,-65.233,111.797)
C5: (47.943,-64.497,111.087)
C4: (49.027,-65.182,110.647)
P: (49.837,-60.648,106.454)
C4': (52.005,-63.663,107.493)
C2': (51.183,-65.671,108.432)
O2': (52.416,-66.383,108.553)
N1: (47.271,-66.567,111.969)
N2: (48.564,-68.461,111.741)
N3: (49.316,-66.478,110.801)
N7: (48.009,-63.158,110.703)
N9: (49.803,-64.278,109.985)
O5': (50.326,-62.115,106.761)
O3': (51.626,-65.594,106.030)
Image (generated by PyMOL):