ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:S66:S67

Extra

PDB:
ATOM 1 O3' C A 65 5.610 -5.940 85.566 1.00 69.89 O
ATOM 2 P G A 66 6.186 -7.401 85.872 1.00 70.66 P
ATOM 3 OP1 G A 66 5.448 -8.373 85.025 1.00 69.41 O
ATOM 4 OP2 G A 66 6.249 -7.594 87.343 1.00 69.97 O
ATOM 5 O5' G A 66 7.674 -7.246 85.295 1.00 69.84 O
ATOM 6 C5' G A 66 7.860 -7.025 83.897 1.00 69.28 C
ATOM 7 C4' G A 66 9.311 -6.739 83.562 1.00 68.66 C
ATOM 8 O4' G A 66 9.666 -5.418 84.046 1.00 68.45 O
ATOM 9 C3' G A 66 10.338 -7.664 84.204 1.00 68.05 C
ATOM 10 O3' G A 66 10.475 -8.887 83.515 1.00 66.98 O
ATOM 11 C2' G A 66 11.591 -6.812 84.088 1.00 68.43 C
ATOM 12 O2' G A 66 12.171 -6.817 82.800 1.00 68.82 O
ATOM 13 C1' G A 66 11.014 -5.453 84.471 1.00 68.52 C
ATOM 14 N9 G A 66 11.098 -5.328 85.913 1.00 68.51 N
ATOM 15 C8 G A 66 10.122 -5.514 86.865 1.00 68.50 C
ATOM 16 N7 G A 66 10.556 -5.345 88.082 1.00 68.42 N
ATOM 17 C5 G A 66 11.903 -5.041 87.918 1.00 68.50 C
ATOM 18 C6 G A 66 12.908 -4.752 88.871 1.00 68.53 C
ATOM 19 O6 G A 66 12.807 -4.709 90.103 1.00 68.55 O
ATOM 20 N1 G A 66 14.140 -4.502 88.265 1.00 68.68 N
ATOM 21 C2 G A 66 14.386 -4.525 86.910 1.00 68.65 C
ATOM 22 N2 G A 66 15.643 -4.260 86.519 1.00 68.63 N
ATOM 23 N3 G A 66 13.455 -4.795 86.006 1.00 68.53 N
ATOM 24 C4 G A 66 12.251 -5.038 86.587 1.00 68.49 C
ATOM 25 P G A 67 11.441 -10.033 84.082 1.00 66.74 P
ATOM 26 OP1 G A 67 11.154 -11.280 83.338 1.00 66.04 O
ATOM 27 OP2 G A 67 11.359 -10.027 85.560 1.00 66.56 O
ATOM 28 O5' G A 67 12.894 -9.537 83.643 1.00 65.33 O
TER

ATOM 1 O3' G B 66 10.475 -8.887 83.515 1.00 66.98 O
ATOM 2 P G B 67 11.441 -10.033 84.082 1.00 66.74 P
ATOM 3 OP1 G B 67 11.154 -11.280 83.338 1.00 66.04 O
ATOM 4 OP2 G B 67 11.359 -10.027 85.560 1.00 66.56 O
ATOM 5 O5' G B 67 12.894 -9.537 83.643 1.00 65.33 O
ATOM 6 C5' G B 67 14.030 -10.264 84.069 1.00 64.28 C
ATOM 7 C4' G B 67 15.178 -9.325 84.371 1.00 63.85 C
ATOM 8 O4' G B 67 14.705 -8.034 84.854 1.00 64.03 O
ATOM 9 C3' G B 67 16.088 -9.791 85.492 1.00 63.35 C
ATOM 10 O3' G B 67 16.982 -10.805 85.071 1.00 62.47 O
ATOM 11 C2' G B 67 16.764 -8.473 85.848 1.00 63.50 C
ATOM 12 O2' G B 67 17.620 -7.955 84.846 1.00 63.05 O
ATOM 13 C1' G B 67 15.505 -7.624 85.961 1.00 63.39 C
ATOM 14 N9 G B 67 14.789 -7.788 87.241 1.00 63.27 N
ATOM 15 C8 G B 67 13.520 -8.287 87.441 1.00 63.00 C
ATOM 16 N7 G B 67 13.149 -8.311 88.694 1.00 63.03 N
ATOM 17 C5 G B 67 14.240 -7.800 89.384 1.00 62.74 C
ATOM 18 C6 G B 67 14.425 -7.582 90.775 1.00 62.81 C
ATOM 19 O6 G B 67 13.639 -7.803 91.707 1.00 62.90 O
ATOM 20 N1 G B 67 15.682 -7.045 91.051 1.00 62.92 N
ATOM 21 C2 G B 67 16.640 -6.746 90.103 1.00 63.06 C
ATOM 22 N2 G B 67 17.799 -6.238 90.550 1.00 63.02 N
ATOM 23 N3 G B 67 16.475 -6.948 88.798 1.00 62.99 N
ATOM 24 C4 G B 67 15.257 -7.475 88.506 1.00 62.94 C
ATOM 25 P U B 68 17.373 -11.986 86.076 1.00 61.15 P
ATOM 26 OP1 U B 68 17.729 -13.157 85.249 1.00 61.18 O
ATOM 27 OP2 U B 68 16.342 -12.086 87.133 1.00 61.12 O
ATOM 28 O5' U B 68 18.702 -11.458 86.771 1.00 61.10 O
TER

Atoms:
OP1: (5.448,-8.373,85.025)
OP2: (6.249,-7.594,87.343)
C3': (10.338,-7.664,84.204)
C1': (11.014,-5.453,84.471)
C5': (7.860,-7.025,83.897)
O6: (12.807,-4.709,90.103)
O4': (9.666,-5.418,84.046)
C8: (10.122,-5.514,86.865)
C2: (14.386,-4.525,86.910)
C6: (12.908,-4.752,88.871)
C5: (11.903,-5.041,87.918)
C4: (12.251,-5.038,86.587)
P: (6.186,-7.401,85.872)
C4': (9.311,-6.739,83.562)
C2': (11.591,-6.812,84.088)
O2': (12.171,-6.817,82.800)
N1: (14.140,-4.502,88.265)
N2: (15.643,-4.260,86.519)
N3: (13.455,-4.795,86.006)
N7: (10.556,-5.345,88.082)
N9: (11.098,-5.328,85.913)
O5': (7.674,-7.246,85.295)
O3': (10.475,-8.887,83.515)
OP1: (11.154,-11.280,83.338)
OP2: (11.359,-10.027,85.560)
C3': (16.088,-9.791,85.492)
C1': (15.505,-7.624,85.961)
C5': (14.030,-10.264,84.069)
O6: (13.639,-7.803,91.707)
O4': (14.705,-8.034,84.854)
C8: (13.520,-8.287,87.441)
C2: (16.640,-6.746,90.103)
C6: (14.425,-7.582,90.775)
C5: (14.240,-7.800,89.384)
C4: (15.257,-7.475,88.506)
P: (11.441,-10.033,84.082)
C4': (15.178,-9.325,84.371)
C2': (16.764,-8.473,85.848)
O2': (17.620,-7.955,84.846)
N1: (15.682,-7.045,91.051)
N2: (17.799,-6.238,90.550)
N3: (16.475,-6.948,88.798)
N7: (13.149,-8.311,88.694)
N9: (14.789,-7.788,87.241)
O5': (12.894,-9.537,83.643)
O3': (16.982,-10.805,85.071)
Image (generated by PyMOL):
PyMOL image
show in jmol