Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1756:1757
Extra
PDB:
ATOM 1 O3' U A 755 38.675 -15.179 105.893 1.00 39.64 O
ATOM 2 P G A 756 37.794 -14.446 107.000 1.00 39.16 P
ATOM 3 OP1 G A 756 37.663 -15.389 108.158 1.00 39.48 O
ATOM 4 OP2 G A 756 36.551 -13.965 106.356 1.00 38.97 O
ATOM 5 O5' G A 756 38.693 -13.191 107.361 1.00 39.24 O
ATOM 6 C5' G A 756 39.814 -13.286 108.179 1.00 39.48 C
ATOM 7 C4' G A 756 40.599 -12.016 108.107 1.00 39.46 C
ATOM 8 O4' G A 756 40.904 -11.685 106.711 1.00 39.10 O
ATOM 9 C3' G A 756 39.913 -10.759 108.599 1.00 39.58 C
ATOM 10 O3' G A 756 39.785 -10.705 110.016 1.00 39.96 O
ATOM 11 C2' G A 756 40.833 -9.693 108.007 1.00 39.45 C
ATOM 12 O2' G A 756 42.060 -9.669 108.702 1.00 39.67 O
ATOM 13 C1' G A 756 41.107 -10.282 106.614 1.00 39.08 C
ATOM 14 N9 G A 756 40.194 -9.721 105.591 1.00 38.80 N
ATOM 15 C8 G A 756 39.034 -10.234 105.099 1.00 38.66 C
ATOM 16 N7 G A 756 38.468 -9.452 104.192 1.00 38.44 N
ATOM 17 C5 G A 756 39.270 -8.372 104.083 1.00 38.43 C
ATOM 18 C6 G A 756 39.146 -7.244 103.263 1.00 38.26 C
ATOM 19 O6 G A 756 38.258 -6.946 102.476 1.00 38.07 O
ATOM 20 N1 G A 756 40.211 -6.364 103.445 1.00 38.34 N
ATOM 21 C2 G A 756 41.240 -6.593 104.309 1.00 38.56 C
ATOM 22 N2 G A 756 42.163 -5.651 104.332 1.00 38.62 N
ATOM 23 N3 G A 756 41.362 -7.657 105.079 1.00 38.73 N
ATOM 24 C4 G A 756 40.344 -8.513 104.928 1.00 38.66 C
ATOM 25 P G A 757 39.042 -9.444 110.744 1.00 42.13 P
ATOM 26 OP1 G A 757 38.981 -9.738 112.204 1.00 42.55 O
ATOM 27 OP2 G A 757 37.770 -9.191 110.003 1.00 41.91 O
ATOM 28 O5' G A 757 40.048 -8.248 110.497 1.00 42.10 O
TER
ATOM 1 O3' G B 756 39.785 -10.705 110.016 1.00 39.96 O
ATOM 2 P G B 757 39.042 -9.444 110.744 1.00 42.13 P
ATOM 3 OP1 G B 757 38.981 -9.738 112.204 1.00 42.55 O
ATOM 4 OP2 G B 757 37.770 -9.191 110.003 1.00 41.91 O
ATOM 5 O5' G B 757 40.048 -8.248 110.497 1.00 42.10 O
ATOM 6 C5' G B 757 39.651 -6.911 110.688 1.00 42.18 C
ATOM 7 C4' G B 757 40.470 -5.970 109.853 1.00 41.99 C
ATOM 8 O4' G B 757 40.467 -6.410 108.474 1.00 41.60 O
ATOM 9 C3' G B 757 39.968 -4.549 109.815 1.00 42.02 C
ATOM 10 O3' G B 757 40.418 -3.818 110.927 1.00 42.38 O
ATOM 11 C2' G B 757 40.476 -4.038 108.464 1.00 41.68 C
ATOM 12 O2' G B 757 41.821 -3.631 108.535 1.00 41.75 O
ATOM 13 C1' G B 757 40.429 -5.301 107.612 1.00 41.40 C
ATOM 14 N9 G B 757 39.215 -5.387 106.785 1.00 41.16 N
ATOM 15 C8 G B 757 38.356 -6.451 106.739 1.00 41.10 C
ATOM 16 N7 G B 757 37.360 -6.300 105.887 1.00 40.88 N
ATOM 17 C5 G B 757 37.624 -5.050 105.344 1.00 40.79 C
ATOM 18 C6 G B 757 36.932 -4.337 104.378 1.00 40.58 C
ATOM 19 O6 G B 757 35.925 -4.678 103.820 1.00 40.43 O
ATOM 20 N1 G B 757 37.453 -3.117 104.078 1.00 40.56 N
ATOM 21 C2 G B 757 38.567 -2.622 104.643 1.00 40.73 C
ATOM 22 N2 G B 757 38.944 -1.421 104.216 1.00 40.70 N
ATOM 23 N3 G B 757 39.263 -3.277 105.551 1.00 40.93 N
ATOM 24 C4 G B 757 38.745 -4.483 105.865 1.00 40.95 C
ATOM 25 P U B 758 39.545 -2.647 111.570 1.00 40.95 P
ATOM 26 OP1 U B 758 40.349 -2.036 112.667 1.00 41.32 O
ATOM 27 OP2 U B 758 38.232 -3.235 111.912 1.00 40.99 O
ATOM 28 O5' U B 758 39.410 -1.611 110.357 1.00 40.65 O
TER
ATOM 2 P G A 756 37.794 -14.446 107.000 1.00 39.16 P
ATOM 3 OP1 G A 756 37.663 -15.389 108.158 1.00 39.48 O
ATOM 4 OP2 G A 756 36.551 -13.965 106.356 1.00 38.97 O
ATOM 5 O5' G A 756 38.693 -13.191 107.361 1.00 39.24 O
ATOM 6 C5' G A 756 39.814 -13.286 108.179 1.00 39.48 C
ATOM 7 C4' G A 756 40.599 -12.016 108.107 1.00 39.46 C
ATOM 8 O4' G A 756 40.904 -11.685 106.711 1.00 39.10 O
ATOM 9 C3' G A 756 39.913 -10.759 108.599 1.00 39.58 C
ATOM 10 O3' G A 756 39.785 -10.705 110.016 1.00 39.96 O
ATOM 11 C2' G A 756 40.833 -9.693 108.007 1.00 39.45 C
ATOM 12 O2' G A 756 42.060 -9.669 108.702 1.00 39.67 O
ATOM 13 C1' G A 756 41.107 -10.282 106.614 1.00 39.08 C
ATOM 14 N9 G A 756 40.194 -9.721 105.591 1.00 38.80 N
ATOM 15 C8 G A 756 39.034 -10.234 105.099 1.00 38.66 C
ATOM 16 N7 G A 756 38.468 -9.452 104.192 1.00 38.44 N
ATOM 17 C5 G A 756 39.270 -8.372 104.083 1.00 38.43 C
ATOM 18 C6 G A 756 39.146 -7.244 103.263 1.00 38.26 C
ATOM 19 O6 G A 756 38.258 -6.946 102.476 1.00 38.07 O
ATOM 20 N1 G A 756 40.211 -6.364 103.445 1.00 38.34 N
ATOM 21 C2 G A 756 41.240 -6.593 104.309 1.00 38.56 C
ATOM 22 N2 G A 756 42.163 -5.651 104.332 1.00 38.62 N
ATOM 23 N3 G A 756 41.362 -7.657 105.079 1.00 38.73 N
ATOM 24 C4 G A 756 40.344 -8.513 104.928 1.00 38.66 C
ATOM 25 P G A 757 39.042 -9.444 110.744 1.00 42.13 P
ATOM 26 OP1 G A 757 38.981 -9.738 112.204 1.00 42.55 O
ATOM 27 OP2 G A 757 37.770 -9.191 110.003 1.00 41.91 O
ATOM 28 O5' G A 757 40.048 -8.248 110.497 1.00 42.10 O
TER
ATOM 1 O3' G B 756 39.785 -10.705 110.016 1.00 39.96 O
ATOM 2 P G B 757 39.042 -9.444 110.744 1.00 42.13 P
ATOM 3 OP1 G B 757 38.981 -9.738 112.204 1.00 42.55 O
ATOM 4 OP2 G B 757 37.770 -9.191 110.003 1.00 41.91 O
ATOM 5 O5' G B 757 40.048 -8.248 110.497 1.00 42.10 O
ATOM 6 C5' G B 757 39.651 -6.911 110.688 1.00 42.18 C
ATOM 7 C4' G B 757 40.470 -5.970 109.853 1.00 41.99 C
ATOM 8 O4' G B 757 40.467 -6.410 108.474 1.00 41.60 O
ATOM 9 C3' G B 757 39.968 -4.549 109.815 1.00 42.02 C
ATOM 10 O3' G B 757 40.418 -3.818 110.927 1.00 42.38 O
ATOM 11 C2' G B 757 40.476 -4.038 108.464 1.00 41.68 C
ATOM 12 O2' G B 757 41.821 -3.631 108.535 1.00 41.75 O
ATOM 13 C1' G B 757 40.429 -5.301 107.612 1.00 41.40 C
ATOM 14 N9 G B 757 39.215 -5.387 106.785 1.00 41.16 N
ATOM 15 C8 G B 757 38.356 -6.451 106.739 1.00 41.10 C
ATOM 16 N7 G B 757 37.360 -6.300 105.887 1.00 40.88 N
ATOM 17 C5 G B 757 37.624 -5.050 105.344 1.00 40.79 C
ATOM 18 C6 G B 757 36.932 -4.337 104.378 1.00 40.58 C
ATOM 19 O6 G B 757 35.925 -4.678 103.820 1.00 40.43 O
ATOM 20 N1 G B 757 37.453 -3.117 104.078 1.00 40.56 N
ATOM 21 C2 G B 757 38.567 -2.622 104.643 1.00 40.73 C
ATOM 22 N2 G B 757 38.944 -1.421 104.216 1.00 40.70 N
ATOM 23 N3 G B 757 39.263 -3.277 105.551 1.00 40.93 N
ATOM 24 C4 G B 757 38.745 -4.483 105.865 1.00 40.95 C
ATOM 25 P U B 758 39.545 -2.647 111.570 1.00 40.95 P
ATOM 26 OP1 U B 758 40.349 -2.036 112.667 1.00 41.32 O
ATOM 27 OP2 U B 758 38.232 -3.235 111.912 1.00 40.99 O
ATOM 28 O5' U B 758 39.410 -1.611 110.357 1.00 40.65 O
TER
Atoms:
OP1: (37.663,-15.389,108.158)
OP2: (36.551,-13.965,106.356)
C3': (39.913,-10.759,108.599)
C1': (41.107,-10.282,106.614)
C5': (39.814,-13.286,108.179)
O6: (38.258,-6.946,102.476)
O4': (40.904,-11.685,106.711)
C8: (39.034,-10.234,105.099)
C2: (41.240,-6.593,104.309)
C6: (39.146,-7.244,103.263)
C5: (39.270,-8.372,104.083)
C4: (40.344,-8.513,104.928)
P: (37.794,-14.446,107.000)
C4': (40.599,-12.016,108.107)
C2': (40.833,-9.693,108.007)
O2': (42.060,-9.669,108.702)
N1: (40.211,-6.364,103.445)
N2: (42.163,-5.651,104.332)
N3: (41.362,-7.657,105.079)
N7: (38.468,-9.452,104.192)
N9: (40.194,-9.721,105.591)
O5': (38.693,-13.191,107.361)
O3': (39.785,-10.705,110.016)
OP2: (36.551,-13.965,106.356)
C3': (39.913,-10.759,108.599)
C1': (41.107,-10.282,106.614)
C5': (39.814,-13.286,108.179)
O6: (38.258,-6.946,102.476)
O4': (40.904,-11.685,106.711)
C8: (39.034,-10.234,105.099)
C2: (41.240,-6.593,104.309)
C6: (39.146,-7.244,103.263)
C5: (39.270,-8.372,104.083)
C4: (40.344,-8.513,104.928)
P: (37.794,-14.446,107.000)
C4': (40.599,-12.016,108.107)
C2': (40.833,-9.693,108.007)
O2': (42.060,-9.669,108.702)
N1: (40.211,-6.364,103.445)
N2: (42.163,-5.651,104.332)
N3: (41.362,-7.657,105.079)
N7: (38.468,-9.452,104.192)
N9: (40.194,-9.721,105.591)
O5': (38.693,-13.191,107.361)
O3': (39.785,-10.705,110.016)
OP1: (38.981,-9.738,112.204)
OP2: (37.770,-9.191,110.003)
C3': (39.968,-4.549,109.815)
C1': (40.429,-5.301,107.612)
C5': (39.651,-6.911,110.688)
O6: (35.925,-4.678,103.820)
O4': (40.467,-6.410,108.474)
C8: (38.356,-6.451,106.739)
C2: (38.567,-2.622,104.643)
C6: (36.932,-4.337,104.378)
C5: (37.624,-5.050,105.344)
C4: (38.745,-4.483,105.865)
P: (39.042,-9.444,110.744)
C4': (40.470,-5.970,109.853)
C2': (40.476,-4.038,108.464)
O2': (41.821,-3.631,108.535)
N1: (37.453,-3.117,104.078)
N2: (38.944,-1.421,104.216)
N3: (39.263,-3.277,105.551)
N7: (37.360,-6.300,105.887)
N9: (39.215,-5.387,106.785)
O5': (40.048,-8.248,110.497)
O3': (40.418,-3.818,110.927)
OP2: (37.770,-9.191,110.003)
C3': (39.968,-4.549,109.815)
C1': (40.429,-5.301,107.612)
C5': (39.651,-6.911,110.688)
O6: (35.925,-4.678,103.820)
O4': (40.467,-6.410,108.474)
C8: (38.356,-6.451,106.739)
C2: (38.567,-2.622,104.643)
C6: (36.932,-4.337,104.378)
C5: (37.624,-5.050,105.344)
C4: (38.745,-4.483,105.865)
P: (39.042,-9.444,110.744)
C4': (40.470,-5.970,109.853)
C2': (40.476,-4.038,108.464)
O2': (41.821,-3.631,108.535)
N1: (37.453,-3.117,104.078)
N2: (38.944,-1.421,104.216)
N3: (39.263,-3.277,105.551)
N7: (37.360,-6.300,105.887)
N9: (39.215,-5.387,106.785)
O5': (40.048,-8.248,110.497)
O3': (40.418,-3.818,110.927)
Image (generated by PyMOL):