ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A489:A490

Extra

PDB:
ATOM 1 O3' G A 488 -4.265 155.858 169.843 1.00 34.50 O
ATOM 2 P G A 489 -4.094 156.304 171.370 1.00 51.63 P
ATOM 3 OP1 G A 489 -5.334 156.980 171.815 1.00 41.92 O
ATOM 4 OP2 G A 489 -2.805 157.009 171.486 1.00 50.42 O
ATOM 5 O5' G A 489 -4.056 154.906 172.130 1.00 40.63 O
ATOM 6 C5' G A 489 -5.335 154.296 172.286 1.00 45.27 C
ATOM 7 C4' G A 489 -5.254 152.842 172.693 1.00 41.82 C
ATOM 8 O4' G A 489 -4.227 152.165 171.916 1.00 40.45 O
ATOM 9 C3' G A 489 -4.889 152.653 174.150 1.00 38.97 C
ATOM 10 O3' G A 489 -6.071 152.644 174.887 1.00 29.39 O
ATOM 11 C2' G A 489 -4.264 151.264 174.118 1.00 47.59 C
ATOM 12 O2' G A 489 -5.205 150.209 174.229 1.00 52.59 O
ATOM 13 C1' G A 489 -3.538 151.276 172.768 1.00 52.54 C
ATOM 14 N9 G A 489 -2.209 151.812 173.006 1.00 57.69 N
ATOM 15 C8 G A 489 -1.696 153.000 172.554 1.00 53.85 C
ATOM 16 N7 G A 489 -0.478 153.205 172.972 1.00 63.16 N
ATOM 17 C5 G A 489 -0.179 152.097 173.750 1.00 54.65 C
ATOM 18 C6 G A 489 0.991 151.774 174.456 1.00 57.34 C
ATOM 19 O6 G A 489 2.040 152.422 174.545 1.00 66.13 O
ATOM 20 N1 G A 489 0.868 150.560 175.110 1.00 56.43 N
ATOM 21 C2 G A 489 -0.244 149.761 175.081 1.00 55.20 C
ATOM 22 N2 G A 489 -0.177 148.620 175.771 1.00 65.64 N
ATOM 23 N3 G A 489 -1.346 150.049 174.427 1.00 58.74 N
ATOM 24 C4 G A 489 -1.237 151.233 173.788 1.00 56.18 C
ATOM 25 P G A 490 -6.422 153.796 175.924 1.00 66.13 P
ATOM 26 OP1 G A 490 -7.817 153.598 176.378 1.00 34.86 O
ATOM 27 OP2 G A 490 -6.051 155.097 175.309 1.00 28.95 O
ATOM 28 O5' G A 490 -5.423 153.436 177.128 1.00 17.46 O
TER

ATOM 1 O3' G B 489 -6.071 152.644 174.887 1.00 29.39 O
ATOM 2 P G B 490 -6.422 153.796 175.924 1.00 66.13 P
ATOM 3 OP1 G B 490 -7.817 153.598 176.378 1.00 34.86 O
ATOM 4 OP2 G B 490 -6.051 155.097 175.309 1.00 28.95 O
ATOM 5 O5' G B 490 -5.423 153.436 177.128 1.00 17.46 O
ATOM 6 C5' G B 490 -5.407 152.125 177.660 1.00 30.47 C
ATOM 7 C4' G B 490 -4.056 151.702 178.209 1.00 30.19 C
ATOM 8 O4' G B 490 -3.089 151.612 177.130 1.00 38.19 O
ATOM 9 C3' G B 490 -3.384 152.638 179.198 1.00 28.51 C
ATOM 10 O3' G B 490 -3.900 152.475 180.497 1.00 27.68 O
ATOM 11 C2' G B 490 -1.995 152.036 179.151 1.00 32.25 C
ATOM 12 O2' G B 490 -1.977 150.761 179.752 1.00 25.63 O
ATOM 13 C1' G B 490 -1.803 151.917 177.651 1.00 34.29 C
ATOM 14 N9 G B 490 -1.316 153.174 177.095 1.00 34.27 N
ATOM 15 C8 G B 490 -2.073 154.155 176.508 1.00 38.03 C
ATOM 16 N7 G B 490 -1.387 155.183 176.099 1.00 37.05 N
ATOM 17 C5 G B 490 -0.088 154.865 176.450 1.00 43.37 C
ATOM 18 C6 G B 490 1.093 155.602 176.255 1.00 44.12 C
ATOM 19 O6 G B 490 1.228 156.710 175.719 1.00 49.18 O
ATOM 20 N1 G B 490 2.191 154.925 176.754 1.00 33.74 N
ATOM 21 C2 G B 490 2.144 153.705 177.353 1.00 38.35 C
ATOM 22 N2 G B 490 3.313 153.218 177.762 1.00 52.35 N
ATOM 23 N3 G B 490 1.050 153.000 177.541 1.00 44.42 N
ATOM 24 C4 G B 490 -0.027 153.640 177.067 1.00 41.21 C
ATOM 25 P A B 491 -4.139 153.751 181.445 1.00 44.28 P
ATOM 26 OP1 A B 491 -5.330 153.458 182.277 1.00 50.13 O
ATOM 27 OP2 A B 491 -4.086 154.930 180.548 1.00 40.77 O
ATOM 28 O5' A B 491 -2.900 153.862 182.457 1.00 39.70 O
TER

Atoms:
OP1: (-5.334,156.980,171.815)
OP2: (-2.805,157.009,171.486)
C3': (-4.889,152.653,174.150)
C1': (-3.538,151.276,172.768)
C5': (-5.335,154.296,172.286)
O6: (2.040,152.422,174.545)
O4': (-4.227,152.165,171.916)
C8: (-1.696,153.000,172.554)
C2: (-0.244,149.761,175.081)
C6: (0.991,151.774,174.456)
C5: (-0.179,152.097,173.750)
C4: (-1.237,151.233,173.788)
P: (-4.094,156.304,171.370)
C4': (-5.254,152.842,172.693)
C2': (-4.264,151.264,174.118)
O2': (-5.205,150.209,174.229)
N1: (0.868,150.560,175.110)
N2: (-0.177,148.620,175.771)
N3: (-1.346,150.049,174.427)
N7: (-0.478,153.205,172.972)
N9: (-2.209,151.812,173.006)
O5': (-4.056,154.906,172.130)
O3': (-6.071,152.644,174.887)
OP1: (-7.817,153.598,176.378)
OP2: (-6.051,155.097,175.309)
C3': (-3.384,152.638,179.198)
C1': (-1.803,151.917,177.651)
C5': (-5.407,152.125,177.660)
O6: (1.228,156.710,175.719)
O4': (-3.089,151.612,177.130)
C8: (-2.073,154.155,176.508)
C2: (2.144,153.705,177.353)
C6: (1.093,155.602,176.255)
C5: (-0.088,154.865,176.450)
C4: (-0.027,153.640,177.067)
P: (-6.422,153.796,175.924)
C4': (-4.056,151.702,178.209)
C2': (-1.995,152.036,179.151)
O2': (-1.977,150.761,179.752)
N1: (2.191,154.925,176.754)
N2: (3.313,153.218,177.762)
N3: (1.050,153.000,177.541)
N7: (-1.387,155.183,176.099)
N9: (-1.316,153.174,177.095)
O5': (-5.423,153.436,177.128)
O3': (-3.900,152.475,180.497)
Image (generated by PyMOL):
PyMOL image
show in jmol