Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A1:A2
Extra
PDB:
ATOM 1 O3' G A 0 -13.922 12.618 2.618 1.00 28.84 O
ATOM 2 P G A 1 -13.871 13.308 4.068 1.00 29.46 P
ATOM 3 OP1 G A 1 -14.968 14.311 4.061 1.00 28.29 O
ATOM 4 OP2 G A 1 -12.459 13.692 4.250 1.00 25.37 O
ATOM 5 O5' G A 1 -14.233 12.094 5.039 1.00 28.16 O
ATOM 6 C5' G A 1 -15.537 11.542 5.126 1.00 27.16 C
ATOM 7 C4' G A 1 -15.543 10.375 6.078 1.00 27.71 C
ATOM 8 O4' G A 1 -14.601 9.379 5.608 1.00 28.64 O
ATOM 9 C3' G A 1 -15.063 10.668 7.493 1.00 28.88 C
ATOM 10 O3' G A 1 -16.051 11.269 8.304 1.00 33.61 O
ATOM 11 C2' G A 1 -14.631 9.292 7.976 1.00 32.13 C
ATOM 12 O2' G A 1 -15.756 8.474 8.228 1.00 30.84 O
ATOM 13 C1' G A 1 -13.985 8.748 6.715 1.00 30.55 C
ATOM 14 N9 G A 1 -12.535 8.996 6.687 1.00 26.56 N
ATOM 15 C8 G A 1 -11.842 9.941 5.977 1.00 28.04 C
ATOM 16 N7 G A 1 -10.551 9.867 6.176 1.00 28.34 N
ATOM 17 C5 G A 1 -10.388 8.812 7.062 1.00 30.14 C
ATOM 18 C6 G A 1 -9.217 8.255 7.643 1.00 28.04 C
ATOM 19 O6 G A 1 -8.041 8.590 7.476 1.00 28.37 O
ATOM 20 N1 G A 1 -9.521 7.194 8.489 1.00 29.15 N
ATOM 21 C2 G A 1 -10.782 6.725 8.745 1.00 28.85 C
ATOM 22 N2 G A 1 -10.882 5.686 9.592 1.00 30.69 N
ATOM 23 N3 G A 1 -11.877 7.230 8.212 1.00 30.73 N
ATOM 24 C4 G A 1 -11.605 8.263 7.383 1.00 29.45 C
ATOM 25 P G A 2 -15.643 12.202 9.560 1.00 34.37 P
ATOM 26 OP1 G A 2 -16.950 12.792 9.951 1.00 31.20 O
ATOM 27 OP2 G A 2 -14.500 13.092 9.201 1.00 29.16 O
ATOM 28 O5' G A 2 -15.137 11.117 10.592 1.00 31.17 O
TER
ATOM 1 O3' G B 1 -16.051 11.269 8.304 1.00 33.61 O
ATOM 2 P G B 2 -15.643 12.202 9.560 1.00 34.37 P
ATOM 3 OP1 G B 2 -16.950 12.792 9.951 1.00 31.20 O
ATOM 4 OP2 G B 2 -14.500 13.092 9.201 1.00 29.16 O
ATOM 5 O5' G B 2 -15.137 11.117 10.592 1.00 31.17 O
ATOM 6 C5' G B 2 -16.021 10.156 11.145 1.00 35.14 C
ATOM 7 C4' G B 2 -15.306 9.277 12.137 1.00 31.54 C
ATOM 8 O4' G B 2 -14.343 8.438 11.454 1.00 30.15 O
ATOM 9 C3' G B 2 -14.480 10.004 13.185 1.00 32.52 C
ATOM 10 O3' G B 2 -15.278 10.513 14.242 1.00 32.21 O
ATOM 11 C2' G B 2 -13.493 8.928 13.606 1.00 29.84 C
ATOM 12 O2' G B 2 -14.141 7.948 14.399 1.00 34.93 O
ATOM 13 C1' G B 2 -13.194 8.277 12.256 1.00 32.24 C
ATOM 14 N9 G B 2 -12.069 8.931 11.565 1.00 29.48 N
ATOM 15 C8 G B 2 -12.163 9.947 10.639 1.00 26.96 C
ATOM 16 N7 G B 2 -10.995 10.323 10.191 1.00 27.57 N
ATOM 17 C5 G B 2 -10.083 9.507 10.852 1.00 28.53 C
ATOM 18 C6 G B 2 -8.664 9.457 10.783 1.00 28.14 C
ATOM 19 O6 G B 2 -7.890 10.129 10.092 1.00 29.47 O
ATOM 20 N1 G B 2 -8.143 8.483 11.627 1.00 27.17 N
ATOM 21 C2 G B 2 -8.880 7.669 12.450 1.00 27.75 C
ATOM 22 N2 G B 2 -8.165 6.800 13.190 1.00 29.72 N
ATOM 23 N3 G B 2 -10.199 7.708 12.529 1.00 28.02 N
ATOM 24 C4 G B 2 -10.733 8.642 11.714 1.00 28.15 C
ATOM 25 P C B 3 -14.874 11.870 15.012 1.00 35.77 P
ATOM 26 OP1 C B 3 -16.031 12.087 15.924 1.00 37.02 O
ATOM 27 OP2 C B 3 -14.484 12.955 14.088 1.00 32.02 O
ATOM 28 O5' C B 3 -13.549 11.418 15.785 1.00 34.84 O
TER
ATOM 2 P G A 1 -13.871 13.308 4.068 1.00 29.46 P
ATOM 3 OP1 G A 1 -14.968 14.311 4.061 1.00 28.29 O
ATOM 4 OP2 G A 1 -12.459 13.692 4.250 1.00 25.37 O
ATOM 5 O5' G A 1 -14.233 12.094 5.039 1.00 28.16 O
ATOM 6 C5' G A 1 -15.537 11.542 5.126 1.00 27.16 C
ATOM 7 C4' G A 1 -15.543 10.375 6.078 1.00 27.71 C
ATOM 8 O4' G A 1 -14.601 9.379 5.608 1.00 28.64 O
ATOM 9 C3' G A 1 -15.063 10.668 7.493 1.00 28.88 C
ATOM 10 O3' G A 1 -16.051 11.269 8.304 1.00 33.61 O
ATOM 11 C2' G A 1 -14.631 9.292 7.976 1.00 32.13 C
ATOM 12 O2' G A 1 -15.756 8.474 8.228 1.00 30.84 O
ATOM 13 C1' G A 1 -13.985 8.748 6.715 1.00 30.55 C
ATOM 14 N9 G A 1 -12.535 8.996 6.687 1.00 26.56 N
ATOM 15 C8 G A 1 -11.842 9.941 5.977 1.00 28.04 C
ATOM 16 N7 G A 1 -10.551 9.867 6.176 1.00 28.34 N
ATOM 17 C5 G A 1 -10.388 8.812 7.062 1.00 30.14 C
ATOM 18 C6 G A 1 -9.217 8.255 7.643 1.00 28.04 C
ATOM 19 O6 G A 1 -8.041 8.590 7.476 1.00 28.37 O
ATOM 20 N1 G A 1 -9.521 7.194 8.489 1.00 29.15 N
ATOM 21 C2 G A 1 -10.782 6.725 8.745 1.00 28.85 C
ATOM 22 N2 G A 1 -10.882 5.686 9.592 1.00 30.69 N
ATOM 23 N3 G A 1 -11.877 7.230 8.212 1.00 30.73 N
ATOM 24 C4 G A 1 -11.605 8.263 7.383 1.00 29.45 C
ATOM 25 P G A 2 -15.643 12.202 9.560 1.00 34.37 P
ATOM 26 OP1 G A 2 -16.950 12.792 9.951 1.00 31.20 O
ATOM 27 OP2 G A 2 -14.500 13.092 9.201 1.00 29.16 O
ATOM 28 O5' G A 2 -15.137 11.117 10.592 1.00 31.17 O
TER
ATOM 1 O3' G B 1 -16.051 11.269 8.304 1.00 33.61 O
ATOM 2 P G B 2 -15.643 12.202 9.560 1.00 34.37 P
ATOM 3 OP1 G B 2 -16.950 12.792 9.951 1.00 31.20 O
ATOM 4 OP2 G B 2 -14.500 13.092 9.201 1.00 29.16 O
ATOM 5 O5' G B 2 -15.137 11.117 10.592 1.00 31.17 O
ATOM 6 C5' G B 2 -16.021 10.156 11.145 1.00 35.14 C
ATOM 7 C4' G B 2 -15.306 9.277 12.137 1.00 31.54 C
ATOM 8 O4' G B 2 -14.343 8.438 11.454 1.00 30.15 O
ATOM 9 C3' G B 2 -14.480 10.004 13.185 1.00 32.52 C
ATOM 10 O3' G B 2 -15.278 10.513 14.242 1.00 32.21 O
ATOM 11 C2' G B 2 -13.493 8.928 13.606 1.00 29.84 C
ATOM 12 O2' G B 2 -14.141 7.948 14.399 1.00 34.93 O
ATOM 13 C1' G B 2 -13.194 8.277 12.256 1.00 32.24 C
ATOM 14 N9 G B 2 -12.069 8.931 11.565 1.00 29.48 N
ATOM 15 C8 G B 2 -12.163 9.947 10.639 1.00 26.96 C
ATOM 16 N7 G B 2 -10.995 10.323 10.191 1.00 27.57 N
ATOM 17 C5 G B 2 -10.083 9.507 10.852 1.00 28.53 C
ATOM 18 C6 G B 2 -8.664 9.457 10.783 1.00 28.14 C
ATOM 19 O6 G B 2 -7.890 10.129 10.092 1.00 29.47 O
ATOM 20 N1 G B 2 -8.143 8.483 11.627 1.00 27.17 N
ATOM 21 C2 G B 2 -8.880 7.669 12.450 1.00 27.75 C
ATOM 22 N2 G B 2 -8.165 6.800 13.190 1.00 29.72 N
ATOM 23 N3 G B 2 -10.199 7.708 12.529 1.00 28.02 N
ATOM 24 C4 G B 2 -10.733 8.642 11.714 1.00 28.15 C
ATOM 25 P C B 3 -14.874 11.870 15.012 1.00 35.77 P
ATOM 26 OP1 C B 3 -16.031 12.087 15.924 1.00 37.02 O
ATOM 27 OP2 C B 3 -14.484 12.955 14.088 1.00 32.02 O
ATOM 28 O5' C B 3 -13.549 11.418 15.785 1.00 34.84 O
TER
Atoms:
OP1: (-14.968,14.311,4.061)
OP2: (-12.459,13.692,4.250)
C3': (-15.063,10.668,7.493)
C1': (-13.985,8.748,6.715)
C5': (-15.537,11.542,5.126)
O6: (-8.041,8.590,7.476)
O4': (-14.601,9.379,5.608)
C8: (-11.842,9.941,5.977)
C2: (-10.782,6.725,8.745)
C6: (-9.217,8.255,7.643)
C5: (-10.388,8.812,7.062)
C4: (-11.605,8.263,7.383)
P: (-13.871,13.308,4.068)
C4': (-15.543,10.375,6.078)
C2': (-14.631,9.292,7.976)
O2': (-15.756,8.474,8.228)
N1: (-9.521,7.194,8.489)
N2: (-10.882,5.686,9.592)
N3: (-11.877,7.230,8.212)
N7: (-10.551,9.867,6.176)
N9: (-12.535,8.996,6.687)
O5': (-14.233,12.094,5.039)
O3': (-16.051,11.269,8.304)
OP2: (-12.459,13.692,4.250)
C3': (-15.063,10.668,7.493)
C1': (-13.985,8.748,6.715)
C5': (-15.537,11.542,5.126)
O6: (-8.041,8.590,7.476)
O4': (-14.601,9.379,5.608)
C8: (-11.842,9.941,5.977)
C2: (-10.782,6.725,8.745)
C6: (-9.217,8.255,7.643)
C5: (-10.388,8.812,7.062)
C4: (-11.605,8.263,7.383)
P: (-13.871,13.308,4.068)
C4': (-15.543,10.375,6.078)
C2': (-14.631,9.292,7.976)
O2': (-15.756,8.474,8.228)
N1: (-9.521,7.194,8.489)
N2: (-10.882,5.686,9.592)
N3: (-11.877,7.230,8.212)
N7: (-10.551,9.867,6.176)
N9: (-12.535,8.996,6.687)
O5': (-14.233,12.094,5.039)
O3': (-16.051,11.269,8.304)
OP1: (-16.950,12.792,9.951)
OP2: (-14.500,13.092,9.201)
C3': (-14.480,10.004,13.185)
C1': (-13.194,8.277,12.256)
C5': (-16.021,10.156,11.145)
O6: (-7.890,10.129,10.092)
O4': (-14.343,8.438,11.454)
C8: (-12.163,9.947,10.639)
C2: (-8.880,7.669,12.450)
C6: (-8.664,9.457,10.783)
C5: (-10.083,9.507,10.852)
C4: (-10.733,8.642,11.714)
P: (-15.643,12.202,9.560)
C4': (-15.306,9.277,12.137)
C2': (-13.493,8.928,13.606)
O2': (-14.141,7.948,14.399)
N1: (-8.143,8.483,11.627)
N2: (-8.165,6.800,13.190)
N3: (-10.199,7.708,12.529)
N7: (-10.995,10.323,10.191)
N9: (-12.069,8.931,11.565)
O5': (-15.137,11.117,10.592)
O3': (-15.278,10.513,14.242)
OP2: (-14.500,13.092,9.201)
C3': (-14.480,10.004,13.185)
C1': (-13.194,8.277,12.256)
C5': (-16.021,10.156,11.145)
O6: (-7.890,10.129,10.092)
O4': (-14.343,8.438,11.454)
C8: (-12.163,9.947,10.639)
C2: (-8.880,7.669,12.450)
C6: (-8.664,9.457,10.783)
C5: (-10.083,9.507,10.852)
C4: (-10.733,8.642,11.714)
P: (-15.643,12.202,9.560)
C4': (-15.306,9.277,12.137)
C2': (-13.493,8.928,13.606)
O2': (-14.141,7.948,14.399)
N1: (-8.143,8.483,11.627)
N2: (-8.165,6.800,13.190)
N3: (-10.199,7.708,12.529)
N7: (-10.995,10.323,10.191)
N9: (-12.069,8.931,11.565)
O5': (-15.137,11.117,10.592)
O3': (-15.278,10.513,14.242)
Image (generated by PyMOL):