Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R9W:B19:B20
Extra
PDB:
ATOM 1 O3' C A 18 -19.646 -2.614 -1.291 1.00 76.46 O
ATOM 2 P G A 19 -18.775 -3.939 -0.987 1.00110.66 P
ATOM 3 OP1 G A 19 -17.353 -3.516 -0.881 1.00104.89 O
ATOM 4 OP2 G A 19 -19.145 -4.951 -2.009 1.00110.46 O
ATOM 5 O5' G A 19 -19.303 -4.397 0.441 1.00101.22 O
ATOM 6 C5' G A 19 -18.580 -4.075 1.616 1.00 99.50 C
ATOM 7 C4' G A 19 -19.291 -4.561 2.849 1.00 95.19 C
ATOM 8 O4' G A 19 -20.724 -4.368 2.698 1.00 92.56 O
ATOM 9 C3' G A 19 -19.165 -6.042 3.153 1.00 93.61 C
ATOM 10 O3' G A 19 -17.923 -6.396 3.736 1.00 95.95 O
ATOM 11 C2' G A 19 -20.367 -6.277 4.055 1.00 93.06 C
ATOM 12 O2' G A 19 -20.143 -5.732 5.347 1.00 91.95 O
ATOM 13 C1' G A 19 -21.415 -5.417 3.350 1.00 91.04 C
ATOM 14 N9 G A 19 -22.152 -6.189 2.337 1.00 83.86 N
ATOM 15 C8 G A 19 -21.990 -6.138 0.975 1.00 81.13 C
ATOM 16 N7 G A 19 -22.787 -6.959 0.341 1.00 78.79 N
ATOM 17 C5 G A 19 -23.510 -7.595 1.343 1.00 79.59 C
ATOM 18 C6 G A 19 -24.519 -8.594 1.273 1.00 77.85 C
ATOM 19 O6 G A 19 -25.004 -9.135 0.281 1.00 77.45 O
ATOM 20 N1 G A 19 -24.982 -8.958 2.529 1.00 76.77 N
ATOM 21 C2 G A 19 -24.525 -8.427 3.711 1.00 75.87 C
ATOM 22 N2 G A 19 -25.092 -8.906 4.829 1.00 72.92 N
ATOM 23 N3 G A 19 -23.581 -7.501 3.796 1.00 77.40 N
ATOM 24 C4 G A 19 -23.124 -7.130 2.582 1.00 79.75 C
ATOM 25 P G A 20 -17.221 -7.791 3.344 1.00126.05 P
ATOM 26 OP1 G A 20 -15.824 -7.737 3.848 1.00124.43 O
ATOM 27 OP2 G A 20 -17.449 -8.004 1.894 1.00124.51 O
ATOM 28 O5' G A 20 -18.060 -8.849 4.185 1.00 85.87 O
TER
ATOM 1 O3' G B 19 -17.923 -6.396 3.736 1.00 95.95 O
ATOM 2 P G B 20 -17.221 -7.791 3.344 1.00126.05 P
ATOM 3 OP1 G B 20 -15.824 -7.737 3.848 1.00124.43 O
ATOM 4 OP2 G B 20 -17.449 -8.004 1.894 1.00124.51 O
ATOM 5 O5' G B 20 -18.060 -8.849 4.185 1.00 85.87 O
ATOM 6 C5' G B 20 -18.188 -8.709 5.588 1.00 84.73 C
ATOM 7 C4' G B 20 -19.345 -9.504 6.124 1.00 83.39 C
ATOM 8 O4' G B 20 -20.559 -9.162 5.413 1.00 80.59 O
ATOM 9 C3' G B 20 -19.258 -11.009 5.962 1.00 84.25 C
ATOM 10 O3' G B 20 -18.388 -11.621 6.891 1.00 88.66 O
ATOM 11 C2' G B 20 -20.712 -11.433 6.119 1.00 82.61 C
ATOM 12 O2' G B 20 -21.083 -11.454 7.489 1.00 80.68 O
ATOM 13 C1' G B 20 -21.442 -10.270 5.440 1.00 82.99 C
ATOM 14 N9 G B 20 -21.855 -10.600 4.062 1.00 80.03 N
ATOM 15 C8 G B 20 -21.404 -10.049 2.887 1.00 79.49 C
ATOM 16 N7 G B 20 -21.990 -10.558 1.834 1.00 76.76 N
ATOM 17 C5 G B 20 -22.884 -11.499 2.332 1.00 72.20 C
ATOM 18 C6 G B 20 -23.796 -12.371 1.666 1.00 69.15 C
ATOM 19 O6 G B 20 -24.020 -12.498 0.455 1.00 68.46 O
ATOM 20 N1 G B 20 -24.515 -13.163 2.552 1.00 66.69 N
ATOM 21 C2 G B 20 -24.377 -13.126 3.913 1.00 70.19 C
ATOM 22 N2 G B 20 -25.171 -13.974 4.591 1.00 67.42 N
ATOM 23 N3 G B 20 -23.525 -12.322 4.551 1.00 72.57 N
ATOM 24 C4 G B 20 -22.814 -11.534 3.708 1.00 76.36 C
ATOM 25 P U B 21 -17.773 -13.070 6.575 1.00 92.40 P
ATOM 26 OP1 U B 21 -16.736 -13.337 7.601 1.00 95.98 O
ATOM 27 OP2 U B 21 -17.377 -13.069 5.149 1.00 95.64 O
ATOM 28 O5' U B 21 -19.020 -14.044 6.791 1.00 72.09 O
TER
ATOM 2 P G A 19 -18.775 -3.939 -0.987 1.00110.66 P
ATOM 3 OP1 G A 19 -17.353 -3.516 -0.881 1.00104.89 O
ATOM 4 OP2 G A 19 -19.145 -4.951 -2.009 1.00110.46 O
ATOM 5 O5' G A 19 -19.303 -4.397 0.441 1.00101.22 O
ATOM 6 C5' G A 19 -18.580 -4.075 1.616 1.00 99.50 C
ATOM 7 C4' G A 19 -19.291 -4.561 2.849 1.00 95.19 C
ATOM 8 O4' G A 19 -20.724 -4.368 2.698 1.00 92.56 O
ATOM 9 C3' G A 19 -19.165 -6.042 3.153 1.00 93.61 C
ATOM 10 O3' G A 19 -17.923 -6.396 3.736 1.00 95.95 O
ATOM 11 C2' G A 19 -20.367 -6.277 4.055 1.00 93.06 C
ATOM 12 O2' G A 19 -20.143 -5.732 5.347 1.00 91.95 O
ATOM 13 C1' G A 19 -21.415 -5.417 3.350 1.00 91.04 C
ATOM 14 N9 G A 19 -22.152 -6.189 2.337 1.00 83.86 N
ATOM 15 C8 G A 19 -21.990 -6.138 0.975 1.00 81.13 C
ATOM 16 N7 G A 19 -22.787 -6.959 0.341 1.00 78.79 N
ATOM 17 C5 G A 19 -23.510 -7.595 1.343 1.00 79.59 C
ATOM 18 C6 G A 19 -24.519 -8.594 1.273 1.00 77.85 C
ATOM 19 O6 G A 19 -25.004 -9.135 0.281 1.00 77.45 O
ATOM 20 N1 G A 19 -24.982 -8.958 2.529 1.00 76.77 N
ATOM 21 C2 G A 19 -24.525 -8.427 3.711 1.00 75.87 C
ATOM 22 N2 G A 19 -25.092 -8.906 4.829 1.00 72.92 N
ATOM 23 N3 G A 19 -23.581 -7.501 3.796 1.00 77.40 N
ATOM 24 C4 G A 19 -23.124 -7.130 2.582 1.00 79.75 C
ATOM 25 P G A 20 -17.221 -7.791 3.344 1.00126.05 P
ATOM 26 OP1 G A 20 -15.824 -7.737 3.848 1.00124.43 O
ATOM 27 OP2 G A 20 -17.449 -8.004 1.894 1.00124.51 O
ATOM 28 O5' G A 20 -18.060 -8.849 4.185 1.00 85.87 O
TER
ATOM 1 O3' G B 19 -17.923 -6.396 3.736 1.00 95.95 O
ATOM 2 P G B 20 -17.221 -7.791 3.344 1.00126.05 P
ATOM 3 OP1 G B 20 -15.824 -7.737 3.848 1.00124.43 O
ATOM 4 OP2 G B 20 -17.449 -8.004 1.894 1.00124.51 O
ATOM 5 O5' G B 20 -18.060 -8.849 4.185 1.00 85.87 O
ATOM 6 C5' G B 20 -18.188 -8.709 5.588 1.00 84.73 C
ATOM 7 C4' G B 20 -19.345 -9.504 6.124 1.00 83.39 C
ATOM 8 O4' G B 20 -20.559 -9.162 5.413 1.00 80.59 O
ATOM 9 C3' G B 20 -19.258 -11.009 5.962 1.00 84.25 C
ATOM 10 O3' G B 20 -18.388 -11.621 6.891 1.00 88.66 O
ATOM 11 C2' G B 20 -20.712 -11.433 6.119 1.00 82.61 C
ATOM 12 O2' G B 20 -21.083 -11.454 7.489 1.00 80.68 O
ATOM 13 C1' G B 20 -21.442 -10.270 5.440 1.00 82.99 C
ATOM 14 N9 G B 20 -21.855 -10.600 4.062 1.00 80.03 N
ATOM 15 C8 G B 20 -21.404 -10.049 2.887 1.00 79.49 C
ATOM 16 N7 G B 20 -21.990 -10.558 1.834 1.00 76.76 N
ATOM 17 C5 G B 20 -22.884 -11.499 2.332 1.00 72.20 C
ATOM 18 C6 G B 20 -23.796 -12.371 1.666 1.00 69.15 C
ATOM 19 O6 G B 20 -24.020 -12.498 0.455 1.00 68.46 O
ATOM 20 N1 G B 20 -24.515 -13.163 2.552 1.00 66.69 N
ATOM 21 C2 G B 20 -24.377 -13.126 3.913 1.00 70.19 C
ATOM 22 N2 G B 20 -25.171 -13.974 4.591 1.00 67.42 N
ATOM 23 N3 G B 20 -23.525 -12.322 4.551 1.00 72.57 N
ATOM 24 C4 G B 20 -22.814 -11.534 3.708 1.00 76.36 C
ATOM 25 P U B 21 -17.773 -13.070 6.575 1.00 92.40 P
ATOM 26 OP1 U B 21 -16.736 -13.337 7.601 1.00 95.98 O
ATOM 27 OP2 U B 21 -17.377 -13.069 5.149 1.00 95.64 O
ATOM 28 O5' U B 21 -19.020 -14.044 6.791 1.00 72.09 O
TER
Atoms:
OP1: (-17.353,-3.516,-0.881)
OP2: (-19.145,-4.951,-2.009)
C3': (-19.165,-6.042,3.153)
C1': (-21.415,-5.417,3.350)
C5': (-18.580,-4.075,1.616)
O6: (-25.004,-9.135,0.281)
O4': (-20.724,-4.368,2.698)
C8: (-21.990,-6.138,0.975)
C2: (-24.525,-8.427,3.711)
C6: (-24.519,-8.594,1.273)
C5: (-23.510,-7.595,1.343)
C4: (-23.124,-7.130,2.582)
P: (-18.775,-3.939,-0.987)
C4': (-19.291,-4.561,2.849)
C2': (-20.367,-6.277,4.055)
O2': (-20.143,-5.732,5.347)
N1: (-24.982,-8.958,2.529)
N2: (-25.092,-8.906,4.829)
N3: (-23.581,-7.501,3.796)
N7: (-22.787,-6.959,0.341)
N9: (-22.152,-6.189,2.337)
O5': (-19.303,-4.397,0.441)
O3': (-17.923,-6.396,3.736)
OP2: (-19.145,-4.951,-2.009)
C3': (-19.165,-6.042,3.153)
C1': (-21.415,-5.417,3.350)
C5': (-18.580,-4.075,1.616)
O6: (-25.004,-9.135,0.281)
O4': (-20.724,-4.368,2.698)
C8: (-21.990,-6.138,0.975)
C2: (-24.525,-8.427,3.711)
C6: (-24.519,-8.594,1.273)
C5: (-23.510,-7.595,1.343)
C4: (-23.124,-7.130,2.582)
P: (-18.775,-3.939,-0.987)
C4': (-19.291,-4.561,2.849)
C2': (-20.367,-6.277,4.055)
O2': (-20.143,-5.732,5.347)
N1: (-24.982,-8.958,2.529)
N2: (-25.092,-8.906,4.829)
N3: (-23.581,-7.501,3.796)
N7: (-22.787,-6.959,0.341)
N9: (-22.152,-6.189,2.337)
O5': (-19.303,-4.397,0.441)
O3': (-17.923,-6.396,3.736)
OP1: (-15.824,-7.737,3.848)
OP2: (-17.449,-8.004,1.894)
C3': (-19.258,-11.009,5.962)
C1': (-21.442,-10.270,5.440)
C5': (-18.188,-8.709,5.588)
O6: (-24.020,-12.498,0.455)
O4': (-20.559,-9.162,5.413)
C8: (-21.404,-10.049,2.887)
C2: (-24.377,-13.126,3.913)
C6: (-23.796,-12.371,1.666)
C5: (-22.884,-11.499,2.332)
C4: (-22.814,-11.534,3.708)
P: (-17.221,-7.791,3.344)
C4': (-19.345,-9.504,6.124)
C2': (-20.712,-11.433,6.119)
O2': (-21.083,-11.454,7.489)
N1: (-24.515,-13.163,2.552)
N2: (-25.171,-13.974,4.591)
N3: (-23.525,-12.322,4.551)
N7: (-21.990,-10.558,1.834)
N9: (-21.855,-10.600,4.062)
O5': (-18.060,-8.849,4.185)
O3': (-18.388,-11.621,6.891)
OP2: (-17.449,-8.004,1.894)
C3': (-19.258,-11.009,5.962)
C1': (-21.442,-10.270,5.440)
C5': (-18.188,-8.709,5.588)
O6: (-24.020,-12.498,0.455)
O4': (-20.559,-9.162,5.413)
C8: (-21.404,-10.049,2.887)
C2: (-24.377,-13.126,3.913)
C6: (-23.796,-12.371,1.666)
C5: (-22.884,-11.499,2.332)
C4: (-22.814,-11.534,3.708)
P: (-17.221,-7.791,3.344)
C4': (-19.345,-9.504,6.124)
C2': (-20.712,-11.433,6.119)
O2': (-21.083,-11.454,7.489)
N1: (-24.515,-13.163,2.552)
N2: (-25.171,-13.974,4.591)
N3: (-23.525,-12.322,4.551)
N7: (-21.990,-10.558,1.834)
N9: (-21.855,-10.600,4.062)
O5': (-18.060,-8.849,4.185)
O3': (-18.388,-11.621,6.891)
Image (generated by PyMOL):