Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2420:A2421
Extra
PDB:
ATOM 1 O3' A A2419 -102.386 -49.103 28.779 1.00 0.01 O
ATOM 2 P C A2420 -103.308 -50.211 29.443 1.00 0.01 P
ATOM 3 OP1 C A2420 -102.407 -51.051 30.274 1.00 0.01 O
ATOM 4 OP2 C A2420 -104.074 -50.848 28.357 1.00 0.01 O
ATOM 5 O5' C A2420 -104.281 -49.393 30.374 1.00 0.01 O
ATOM 6 C5' C A2420 -104.262 -49.607 31.775 1.00 0.01 C
ATOM 7 C4' C A2420 -105.494 -49.092 32.447 1.00 0.01 C
ATOM 8 O4' C A2420 -105.794 -47.791 31.948 1.00 0.01 O
ATOM 9 C3' C A2420 -106.772 -49.869 32.229 1.00 0.01 C
ATOM 10 O3' C A2420 -106.872 -50.999 33.076 1.00 0.01 O
ATOM 11 C2' C A2420 -107.828 -48.826 32.541 1.00 0.01 C
ATOM 12 O2' C A2420 -108.019 -48.738 33.941 1.00 0.01 O
ATOM 13 C1' C A2420 -107.158 -47.542 32.087 1.00 0.01 C
ATOM 14 N1 C A2420 -107.683 -47.006 30.822 1.00 0.01 N
ATOM 15 C2 C A2420 -108.795 -46.207 30.900 1.00 0.01 C
ATOM 16 O2 C A2420 -109.291 -46.101 32.003 1.00 0.01 O
ATOM 17 N3 C A2420 -109.313 -45.614 29.811 1.00 0.01 N
ATOM 18 C4 C A2420 -108.719 -45.785 28.630 1.00 0.01 C
ATOM 19 N4 C A2420 -109.223 -45.191 27.539 1.00 0.01 N
ATOM 20 C5 C A2420 -107.545 -46.580 28.520 1.00 0.01 C
ATOM 21 C6 C A2420 -107.059 -47.147 29.628 1.00 0.01 C
ATOM 22 P G A2421 -106.212 -52.400 32.668 1.00 0.01 P
ATOM 23 OP1 G A2421 -105.091 -52.111 31.775 1.00 0.01 O
ATOM 24 OP2 G A2421 -107.302 -53.275 32.178 1.00 0.01 O
ATOM 25 O5' G A2421 -105.669 -52.940 34.048 1.00 0.01 O
TER
ATOM 1 O3' C B2420 -106.872 -50.999 33.076 1.00 0.01 O
ATOM 2 P G B2421 -106.212 -52.400 32.668 1.00 0.01 P
ATOM 3 OP1 G B2421 -105.091 -52.111 31.775 1.00 0.01 O
ATOM 4 OP2 G B2421 -107.302 -53.275 32.178 1.00 0.01 O
ATOM 5 O5' G B2421 -105.669 -52.940 34.048 1.00 0.01 O
ATOM 6 C5' G B2421 -104.587 -52.295 34.689 1.00 0.01 C
ATOM 7 C4' G B2421 -103.857 -53.231 35.617 1.00 0.01 C
ATOM 8 O4' G B2421 -104.814 -54.033 36.344 1.00 0.01 O
ATOM 9 C3' G B2421 -102.929 -54.228 34.948 1.00 0.01 C
ATOM 10 O3' G B2421 -101.630 -53.718 34.787 1.00 0.01 O
ATOM 11 C2' G B2421 -102.951 -55.414 35.874 1.00 0.01 C
ATOM 12 O2' G B2421 -101.964 -55.254 36.890 1.00 0.01 O
ATOM 13 C1' G B2421 -104.352 -55.335 36.488 1.00 0.01 C
ATOM 14 N9 G B2421 -105.309 -56.208 35.813 1.00 0.01 N
ATOM 15 C8 G B2421 -105.900 -55.912 34.627 1.00 0.01 C
ATOM 16 N7 G B2421 -106.736 -56.834 34.225 1.00 0.01 N
ATOM 17 C5 G B2421 -106.682 -57.777 35.225 1.00 0.01 C
ATOM 18 C6 G B2421 -107.386 -58.972 35.328 1.00 0.01 C
ATOM 19 O6 G B2421 -108.172 -59.381 34.507 1.00 0.01 O
ATOM 20 N1 G B2421 -107.102 -59.667 36.487 1.00 0.01 N
ATOM 21 C2 G B2421 -106.221 -59.230 37.429 1.00 0.01 C
ATOM 22 N2 G B2421 -106.063 -60.016 38.475 1.00 0.01 N
ATOM 23 N3 G B2421 -105.538 -58.104 37.366 1.00 0.01 N
ATOM 24 C4 G B2421 -105.822 -57.413 36.232 1.00 0.01 C
ATOM 25 P G B2422 -101.368 -52.417 33.923 1.00 0.01 P
ATOM 26 OP1 G B2422 -102.160 -52.532 32.707 1.00 0.01 O
ATOM 27 OP2 G B2422 -99.921 -52.274 33.816 1.00 0.01 O
ATOM 28 O5' G B2422 -101.946 -51.275 34.819 1.00 0.01 O
TER
ATOM 2 P C A2420 -103.308 -50.211 29.443 1.00 0.01 P
ATOM 3 OP1 C A2420 -102.407 -51.051 30.274 1.00 0.01 O
ATOM 4 OP2 C A2420 -104.074 -50.848 28.357 1.00 0.01 O
ATOM 5 O5' C A2420 -104.281 -49.393 30.374 1.00 0.01 O
ATOM 6 C5' C A2420 -104.262 -49.607 31.775 1.00 0.01 C
ATOM 7 C4' C A2420 -105.494 -49.092 32.447 1.00 0.01 C
ATOM 8 O4' C A2420 -105.794 -47.791 31.948 1.00 0.01 O
ATOM 9 C3' C A2420 -106.772 -49.869 32.229 1.00 0.01 C
ATOM 10 O3' C A2420 -106.872 -50.999 33.076 1.00 0.01 O
ATOM 11 C2' C A2420 -107.828 -48.826 32.541 1.00 0.01 C
ATOM 12 O2' C A2420 -108.019 -48.738 33.941 1.00 0.01 O
ATOM 13 C1' C A2420 -107.158 -47.542 32.087 1.00 0.01 C
ATOM 14 N1 C A2420 -107.683 -47.006 30.822 1.00 0.01 N
ATOM 15 C2 C A2420 -108.795 -46.207 30.900 1.00 0.01 C
ATOM 16 O2 C A2420 -109.291 -46.101 32.003 1.00 0.01 O
ATOM 17 N3 C A2420 -109.313 -45.614 29.811 1.00 0.01 N
ATOM 18 C4 C A2420 -108.719 -45.785 28.630 1.00 0.01 C
ATOM 19 N4 C A2420 -109.223 -45.191 27.539 1.00 0.01 N
ATOM 20 C5 C A2420 -107.545 -46.580 28.520 1.00 0.01 C
ATOM 21 C6 C A2420 -107.059 -47.147 29.628 1.00 0.01 C
ATOM 22 P G A2421 -106.212 -52.400 32.668 1.00 0.01 P
ATOM 23 OP1 G A2421 -105.091 -52.111 31.775 1.00 0.01 O
ATOM 24 OP2 G A2421 -107.302 -53.275 32.178 1.00 0.01 O
ATOM 25 O5' G A2421 -105.669 -52.940 34.048 1.00 0.01 O
TER
ATOM 1 O3' C B2420 -106.872 -50.999 33.076 1.00 0.01 O
ATOM 2 P G B2421 -106.212 -52.400 32.668 1.00 0.01 P
ATOM 3 OP1 G B2421 -105.091 -52.111 31.775 1.00 0.01 O
ATOM 4 OP2 G B2421 -107.302 -53.275 32.178 1.00 0.01 O
ATOM 5 O5' G B2421 -105.669 -52.940 34.048 1.00 0.01 O
ATOM 6 C5' G B2421 -104.587 -52.295 34.689 1.00 0.01 C
ATOM 7 C4' G B2421 -103.857 -53.231 35.617 1.00 0.01 C
ATOM 8 O4' G B2421 -104.814 -54.033 36.344 1.00 0.01 O
ATOM 9 C3' G B2421 -102.929 -54.228 34.948 1.00 0.01 C
ATOM 10 O3' G B2421 -101.630 -53.718 34.787 1.00 0.01 O
ATOM 11 C2' G B2421 -102.951 -55.414 35.874 1.00 0.01 C
ATOM 12 O2' G B2421 -101.964 -55.254 36.890 1.00 0.01 O
ATOM 13 C1' G B2421 -104.352 -55.335 36.488 1.00 0.01 C
ATOM 14 N9 G B2421 -105.309 -56.208 35.813 1.00 0.01 N
ATOM 15 C8 G B2421 -105.900 -55.912 34.627 1.00 0.01 C
ATOM 16 N7 G B2421 -106.736 -56.834 34.225 1.00 0.01 N
ATOM 17 C5 G B2421 -106.682 -57.777 35.225 1.00 0.01 C
ATOM 18 C6 G B2421 -107.386 -58.972 35.328 1.00 0.01 C
ATOM 19 O6 G B2421 -108.172 -59.381 34.507 1.00 0.01 O
ATOM 20 N1 G B2421 -107.102 -59.667 36.487 1.00 0.01 N
ATOM 21 C2 G B2421 -106.221 -59.230 37.429 1.00 0.01 C
ATOM 22 N2 G B2421 -106.063 -60.016 38.475 1.00 0.01 N
ATOM 23 N3 G B2421 -105.538 -58.104 37.366 1.00 0.01 N
ATOM 24 C4 G B2421 -105.822 -57.413 36.232 1.00 0.01 C
ATOM 25 P G B2422 -101.368 -52.417 33.923 1.00 0.01 P
ATOM 26 OP1 G B2422 -102.160 -52.532 32.707 1.00 0.01 O
ATOM 27 OP2 G B2422 -99.921 -52.274 33.816 1.00 0.01 O
ATOM 28 O5' G B2422 -101.946 -51.275 34.819 1.00 0.01 O
TER
Atoms:
C2: (-108.795,-46.207,30.900)
OP1: (-102.407,-51.051,30.274)
OP2: (-104.074,-50.848,28.357)
C4: (-108.719,-45.785,28.630)
O5': (-104.281,-49.393,30.374)
C3': (-106.772,-49.869,32.229)
C1': (-107.158,-47.542,32.087)
O4': (-105.794,-47.791,31.948)
C5': (-104.262,-49.607,31.775)
P: (-103.308,-50.211,29.443)
O2: (-109.291,-46.101,32.003)
C4': (-105.494,-49.092,32.447)
C2': (-107.828,-48.826,32.541)
O2': (-108.019,-48.738,33.941)
N1: (-107.683,-47.006,30.822)
N3: (-109.313,-45.614,29.811)
N4: (-109.223,-45.191,27.539)
C6: (-107.059,-47.147,29.628)
C5: (-107.545,-46.580,28.520)
O3': (-106.872,-50.999,33.076)
OP1: (-102.407,-51.051,30.274)
OP2: (-104.074,-50.848,28.357)
C4: (-108.719,-45.785,28.630)
O5': (-104.281,-49.393,30.374)
C3': (-106.772,-49.869,32.229)
C1': (-107.158,-47.542,32.087)
O4': (-105.794,-47.791,31.948)
C5': (-104.262,-49.607,31.775)
P: (-103.308,-50.211,29.443)
O2: (-109.291,-46.101,32.003)
C4': (-105.494,-49.092,32.447)
C2': (-107.828,-48.826,32.541)
O2': (-108.019,-48.738,33.941)
N1: (-107.683,-47.006,30.822)
N3: (-109.313,-45.614,29.811)
N4: (-109.223,-45.191,27.539)
C6: (-107.059,-47.147,29.628)
C5: (-107.545,-46.580,28.520)
O3': (-106.872,-50.999,33.076)
OP1: (-105.091,-52.111,31.775)
OP2: (-107.302,-53.275,32.178)
C3': (-102.929,-54.228,34.948)
C1': (-104.352,-55.335,36.488)
C5': (-104.587,-52.295,34.689)
O6: (-108.172,-59.381,34.507)
O4': (-104.814,-54.033,36.344)
C8: (-105.900,-55.912,34.627)
C2: (-106.221,-59.230,37.429)
C6: (-107.386,-58.972,35.328)
C5: (-106.682,-57.777,35.225)
C4: (-105.822,-57.413,36.232)
P: (-106.212,-52.400,32.668)
C4': (-103.857,-53.231,35.617)
C2': (-102.951,-55.414,35.874)
O2': (-101.964,-55.254,36.890)
N1: (-107.102,-59.667,36.487)
N2: (-106.063,-60.016,38.475)
N3: (-105.538,-58.104,37.366)
N7: (-106.736,-56.834,34.225)
N9: (-105.309,-56.208,35.813)
O5': (-105.669,-52.940,34.048)
O3': (-101.630,-53.718,34.787)
OP2: (-107.302,-53.275,32.178)
C3': (-102.929,-54.228,34.948)
C1': (-104.352,-55.335,36.488)
C5': (-104.587,-52.295,34.689)
O6: (-108.172,-59.381,34.507)
O4': (-104.814,-54.033,36.344)
C8: (-105.900,-55.912,34.627)
C2: (-106.221,-59.230,37.429)
C6: (-107.386,-58.972,35.328)
C5: (-106.682,-57.777,35.225)
C4: (-105.822,-57.413,36.232)
P: (-106.212,-52.400,32.668)
C4': (-103.857,-53.231,35.617)
C2': (-102.951,-55.414,35.874)
O2': (-101.964,-55.254,36.890)
N1: (-107.102,-59.667,36.487)
N2: (-106.063,-60.016,38.475)
N3: (-105.538,-58.104,37.366)
N7: (-106.736,-56.834,34.225)
N9: (-105.309,-56.208,35.813)
O5': (-105.669,-52.940,34.048)
O3': (-101.630,-53.718,34.787)
Image (generated by PyMOL):