Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0302:01274
Extra
PDB:
ATOM 1 O3' U A 301 1.030 145.121 52.827 1.00 57.55 O
ATOM 2 P G A 302 1.488 146.652 52.974 1.00 57.35 P
ATOM 3 OP1 G A 302 1.469 146.998 54.410 1.00 57.05 O
ATOM 4 OP2 G A 302 0.714 147.475 52.013 1.00 58.24 O
ATOM 5 O5' G A 302 3.002 146.642 52.487 1.00 57.71 O
ATOM 6 C5' G A 302 4.013 145.967 53.251 1.00 54.63 C
ATOM 7 C4' G A 302 5.337 145.999 52.525 1.00 52.49 C
ATOM 8 O4' G A 302 5.245 145.251 51.283 1.00 51.65 O
ATOM 9 C3' G A 302 5.829 147.363 52.076 1.00 51.08 C
ATOM 10 O3' G A 302 6.413 148.103 53.134 1.00 50.27 O
ATOM 11 C2' G A 302 6.843 146.983 51.009 1.00 51.48 C
ATOM 12 O2' G A 302 8.066 146.528 51.542 1.00 52.65 O
ATOM 13 C1' G A 302 6.128 145.817 50.326 1.00 52.04 C
ATOM 14 N9 G A 302 5.350 146.302 49.190 1.00 53.01 N
ATOM 15 C8 G A 302 4.096 146.860 49.215 1.00 52.91 C
ATOM 16 N7 G A 302 3.697 147.273 48.045 1.00 54.13 N
ATOM 17 C5 G A 302 4.742 146.951 47.192 1.00 54.55 C
ATOM 18 C6 G A 302 4.888 147.164 45.800 1.00 55.41 C
ATOM 19 O6 G A 302 4.103 147.709 45.016 1.00 58.13 O
ATOM 20 N1 G A 302 6.103 146.674 45.334 1.00 55.35 N
ATOM 21 C2 G A 302 7.059 146.066 46.106 1.00 53.90 C
ATOM 22 N2 G A 302 8.165 145.659 45.468 1.00 52.22 N
ATOM 23 N3 G A 302 6.939 145.870 47.405 1.00 53.91 N
ATOM 24 C4 G A 302 5.762 146.334 47.879 1.00 53.62 C
ATOM 25 P G A 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 26 OP1 G A 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 27 OP2 G A 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 28 O5' G A 303 6.885 150.198 51.822 1.00 49.77 O
TER
ATOM 1 O3' U B1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 2 P G B1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 3 OP1 G B1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 4 OP2 G B1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 5 O5' G B1274 4.430 139.604 53.889 1.00 44.98 O
ATOM 6 C5' G B1274 4.589 139.943 55.281 1.00 46.22 C
ATOM 7 C4' G B1274 3.839 138.947 56.139 1.00 49.83 C
ATOM 8 O4' G B1274 2.425 139.024 55.804 1.00 52.24 O
ATOM 9 C3' G B1274 4.237 137.483 55.938 1.00 48.90 C
ATOM 10 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 11 C2' G B1274 3.260 137.037 54.861 1.00 50.83 C
ATOM 12 O2' G B1274 3.052 135.641 54.857 1.00 50.46 O
ATOM 13 C1' G B1274 1.996 137.777 55.302 1.00 54.24 C
ATOM 14 N9 G B1274 1.025 138.014 54.239 1.00 57.86 N
ATOM 15 C8 G B1274 1.255 138.555 52.994 1.00 58.46 C
ATOM 16 N7 G B1274 0.184 138.592 52.249 1.00 60.10 N
ATOM 17 C5 G B1274 -0.814 138.055 53.054 1.00 59.03 C
ATOM 18 C6 G B1274 -2.182 137.826 52.787 1.00 58.62 C
ATOM 19 O6 G B1274 -2.809 138.044 51.742 1.00 60.02 O
ATOM 20 N1 G B1274 -2.831 137.273 53.886 1.00 58.47 N
ATOM 21 C2 G B1274 -2.238 136.968 55.086 1.00 57.73 C
ATOM 22 N2 G B1274 -3.032 136.437 56.027 1.00 56.11 N
ATOM 23 N3 G B1274 -0.962 137.167 55.343 1.00 58.62 N
ATOM 24 C4 G B1274 -0.313 137.708 54.289 1.00 58.59 C
ATOM 25 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 26 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 27 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 28 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
TER
ATOM 2 P G A 302 1.488 146.652 52.974 1.00 57.35 P
ATOM 3 OP1 G A 302 1.469 146.998 54.410 1.00 57.05 O
ATOM 4 OP2 G A 302 0.714 147.475 52.013 1.00 58.24 O
ATOM 5 O5' G A 302 3.002 146.642 52.487 1.00 57.71 O
ATOM 6 C5' G A 302 4.013 145.967 53.251 1.00 54.63 C
ATOM 7 C4' G A 302 5.337 145.999 52.525 1.00 52.49 C
ATOM 8 O4' G A 302 5.245 145.251 51.283 1.00 51.65 O
ATOM 9 C3' G A 302 5.829 147.363 52.076 1.00 51.08 C
ATOM 10 O3' G A 302 6.413 148.103 53.134 1.00 50.27 O
ATOM 11 C2' G A 302 6.843 146.983 51.009 1.00 51.48 C
ATOM 12 O2' G A 302 8.066 146.528 51.542 1.00 52.65 O
ATOM 13 C1' G A 302 6.128 145.817 50.326 1.00 52.04 C
ATOM 14 N9 G A 302 5.350 146.302 49.190 1.00 53.01 N
ATOM 15 C8 G A 302 4.096 146.860 49.215 1.00 52.91 C
ATOM 16 N7 G A 302 3.697 147.273 48.045 1.00 54.13 N
ATOM 17 C5 G A 302 4.742 146.951 47.192 1.00 54.55 C
ATOM 18 C6 G A 302 4.888 147.164 45.800 1.00 55.41 C
ATOM 19 O6 G A 302 4.103 147.709 45.016 1.00 58.13 O
ATOM 20 N1 G A 302 6.103 146.674 45.334 1.00 55.35 N
ATOM 21 C2 G A 302 7.059 146.066 46.106 1.00 53.90 C
ATOM 22 N2 G A 302 8.165 145.659 45.468 1.00 52.22 N
ATOM 23 N3 G A 302 6.939 145.870 47.405 1.00 53.91 N
ATOM 24 C4 G A 302 5.762 146.334 47.879 1.00 53.62 C
ATOM 25 P G A 303 6.230 149.697 53.183 1.00 51.08 P
ATOM 26 OP1 G A 303 7.039 150.228 54.306 1.00 50.94 O
ATOM 27 OP2 G A 303 4.776 149.983 53.133 1.00 51.54 O
ATOM 28 O5' G A 303 6.885 150.198 51.822 1.00 49.77 O
TER
ATOM 1 O3' U B1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 2 P G B1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 3 OP1 G B1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 4 OP2 G B1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 5 O5' G B1274 4.430 139.604 53.889 1.00 44.98 O
ATOM 6 C5' G B1274 4.589 139.943 55.281 1.00 46.22 C
ATOM 7 C4' G B1274 3.839 138.947 56.139 1.00 49.83 C
ATOM 8 O4' G B1274 2.425 139.024 55.804 1.00 52.24 O
ATOM 9 C3' G B1274 4.237 137.483 55.938 1.00 48.90 C
ATOM 10 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 11 C2' G B1274 3.260 137.037 54.861 1.00 50.83 C
ATOM 12 O2' G B1274 3.052 135.641 54.857 1.00 50.46 O
ATOM 13 C1' G B1274 1.996 137.777 55.302 1.00 54.24 C
ATOM 14 N9 G B1274 1.025 138.014 54.239 1.00 57.86 N
ATOM 15 C8 G B1274 1.255 138.555 52.994 1.00 58.46 C
ATOM 16 N7 G B1274 0.184 138.592 52.249 1.00 60.10 N
ATOM 17 C5 G B1274 -0.814 138.055 53.054 1.00 59.03 C
ATOM 18 C6 G B1274 -2.182 137.826 52.787 1.00 58.62 C
ATOM 19 O6 G B1274 -2.809 138.044 51.742 1.00 60.02 O
ATOM 20 N1 G B1274 -2.831 137.273 53.886 1.00 58.47 N
ATOM 21 C2 G B1274 -2.238 136.968 55.086 1.00 57.73 C
ATOM 22 N2 G B1274 -3.032 136.437 56.027 1.00 56.11 N
ATOM 23 N3 G B1274 -0.962 137.167 55.343 1.00 58.62 N
ATOM 24 C4 G B1274 -0.313 137.708 54.289 1.00 58.59 C
ATOM 25 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 26 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 27 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 28 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
TER
Atoms:
OP1: (1.469,146.998,54.410)
OP2: (0.714,147.475,52.013)
C3': (5.829,147.363,52.076)
C1': (6.128,145.817,50.326)
C5': (4.013,145.967,53.251)
O6: (4.103,147.709,45.016)
O4': (5.245,145.251,51.283)
C8: (4.096,146.860,49.215)
C2: (7.059,146.066,46.106)
C6: (4.888,147.164,45.800)
C5: (4.742,146.951,47.192)
C4: (5.762,146.334,47.879)
P: (1.488,146.652,52.974)
C4': (5.337,145.999,52.525)
C2': (6.843,146.983,51.009)
O2': (8.066,146.528,51.542)
N1: (6.103,146.674,45.334)
N2: (8.165,145.659,45.468)
N3: (6.939,145.870,47.405)
N7: (3.697,147.273,48.045)
N9: (5.350,146.302,49.190)
O5': (3.002,146.642,52.487)
O3': (6.413,148.103,53.134)
OP2: (0.714,147.475,52.013)
C3': (5.829,147.363,52.076)
C1': (6.128,145.817,50.326)
C5': (4.013,145.967,53.251)
O6: (4.103,147.709,45.016)
O4': (5.245,145.251,51.283)
C8: (4.096,146.860,49.215)
C2: (7.059,146.066,46.106)
C6: (4.888,147.164,45.800)
C5: (4.742,146.951,47.192)
C4: (5.762,146.334,47.879)
P: (1.488,146.652,52.974)
C4': (5.337,145.999,52.525)
C2': (6.843,146.983,51.009)
O2': (8.066,146.528,51.542)
N1: (6.103,146.674,45.334)
N2: (8.165,145.659,45.468)
N3: (6.939,145.870,47.405)
N7: (3.697,147.273,48.045)
N9: (5.350,146.302,49.190)
O5': (3.002,146.642,52.487)
O3': (6.413,148.103,53.134)
OP1: (4.863,139.772,51.452)
OP2: (4.883,141.858,52.941)
C3': (4.237,137.483,55.938)
C1': (1.996,137.777,55.302)
C5': (4.589,139.943,55.281)
O6: (-2.809,138.044,51.742)
O4': (2.425,139.024,55.804)
C8: (1.255,138.555,52.994)
C2: (-2.238,136.968,55.086)
C6: (-2.182,137.826,52.787)
C5: (-0.814,138.055,53.054)
C4: (-0.313,137.708,54.289)
P: (5.177,140.422,52.745)
C4': (3.839,138.947,56.139)
C2': (3.260,137.037,54.861)
O2': (3.052,135.641,54.857)
N1: (-2.831,137.273,53.886)
N2: (-3.032,136.437,56.027)
N3: (-0.962,137.167,55.343)
N7: (0.184,138.592,52.249)
N9: (1.025,138.014,54.239)
O5': (4.430,139.604,53.889)
O3': (3.946,136.719,57.109)
OP2: (4.883,141.858,52.941)
C3': (4.237,137.483,55.938)
C1': (1.996,137.777,55.302)
C5': (4.589,139.943,55.281)
O6: (-2.809,138.044,51.742)
O4': (2.425,139.024,55.804)
C8: (1.255,138.555,52.994)
C2: (-2.238,136.968,55.086)
C6: (-2.182,137.826,52.787)
C5: (-0.814,138.055,53.054)
C4: (-0.313,137.708,54.289)
P: (5.177,140.422,52.745)
C4': (3.839,138.947,56.139)
C2': (3.260,137.037,54.861)
O2': (3.052,135.641,54.857)
N1: (-2.831,137.273,53.886)
N2: (-3.032,136.437,56.027)
N3: (-0.962,137.167,55.343)
N7: (0.184,138.592,52.249)
N9: (1.025,138.014,54.239)
O5': (4.430,139.604,53.889)
O3': (3.946,136.719,57.109)
Image (generated by PyMOL):