ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1O0B:B17:B18

Extra

PDB:
ATOM 1 O3' G A 16 4.807 32.769 27.118 1.00105.24 O
ATOM 2 P U A 17 3.829 31.582 26.671 1.00109.31 P
ATOM 3 OP1 U A 17 4.441 30.906 25.497 1.00107.73 O
ATOM 4 OP2 U A 17 2.457 32.143 26.566 1.00114.19 O
ATOM 5 O5' U A 17 3.879 30.582 27.911 1.00105.38 O
ATOM 6 C5' U A 17 5.142 30.211 28.482 1.00111.20 C
ATOM 7 C4' U A 17 5.275 30.782 29.870 1.00115.04 C
ATOM 8 O4' U A 17 4.599 32.059 29.903 1.00117.90 O
ATOM 9 C3' U A 17 4.606 29.999 30.990 1.00118.17 C
ATOM 10 O3' U A 17 5.529 29.056 31.534 1.00113.82 O
ATOM 11 C2' U A 17 4.371 31.063 32.063 1.00124.41 C
ATOM 12 O2' U A 17 5.449 31.182 32.970 1.00131.48 O
ATOM 13 C1' U A 17 4.253 32.350 31.241 1.00127.16 C
ATOM 14 N1 U A 17 2.933 32.995 31.294 1.00132.27 N
ATOM 15 C2 U A 17 2.713 33.877 32.341 1.00133.53 C
ATOM 16 O2 U A 17 3.553 34.109 33.201 1.00130.21 O
ATOM 17 N3 U A 17 1.477 34.473 32.346 1.00134.69 N
ATOM 18 C4 U A 17 0.456 34.278 31.439 1.00133.89 C
ATOM 19 O4 U A 17 -0.602 34.892 31.582 1.00135.74 O
ATOM 20 C5 U A 17 0.755 33.345 30.394 1.00132.57 C
ATOM 21 C6 U A 17 1.955 32.749 30.358 1.00132.97 C
ATOM 22 P A A 18 5.606 27.566 30.946 1.00109.50 P
ATOM 23 OP1 A A 18 4.675 27.471 29.790 1.00114.18 O
ATOM 24 OP2 A A 18 5.475 26.612 32.076 1.00112.42 O
ATOM 25 O5' A A 18 7.096 27.469 30.402 1.00105.96 O
TER

ATOM 1 O3' U B 17 5.529 29.056 31.534 1.00113.82 O
ATOM 2 P A B 18 5.606 27.566 30.946 1.00109.50 P
ATOM 3 OP1 A B 18 4.675 27.471 29.790 1.00114.18 O
ATOM 4 OP2 A B 18 5.475 26.612 32.076 1.00112.42 O
ATOM 5 O5' A B 18 7.096 27.469 30.402 1.00105.96 O
ATOM 6 C5' A B 18 7.617 26.231 29.893 1.00 98.54 C
ATOM 7 C4' A B 18 9.031 26.430 29.412 1.00 92.35 C
ATOM 8 O4' A B 18 9.841 26.946 30.488 1.00 88.89 O
ATOM 9 C3' A B 18 9.754 25.178 28.952 1.00 89.79 C
ATOM 10 O3' A B 18 9.457 24.996 27.567 1.00 85.49 O
ATOM 11 C2' A B 18 11.230 25.541 29.140 1.00 92.17 C
ATOM 12 O2' A B 18 11.783 26.167 27.998 1.00102.90 O
ATOM 13 C1' A B 18 11.181 26.571 30.275 1.00 84.92 C
ATOM 14 N9 A B 18 11.770 26.189 31.553 1.00 74.89 N
ATOM 15 C8 A B 18 11.127 25.764 32.685 1.00 77.02 C
ATOM 16 N7 A B 18 11.928 25.550 33.701 1.00 77.38 N
ATOM 17 C5 A B 18 13.187 25.841 33.199 1.00 74.19 C
ATOM 18 C6 A B 18 14.464 25.805 33.777 1.00 69.37 C
ATOM 19 N6 A B 18 14.695 25.434 35.037 1.00 66.96 N
ATOM 20 N1 A B 18 15.511 26.159 33.003 1.00 69.02 N
ATOM 21 C2 A B 18 15.280 26.508 31.730 1.00 69.34 C
ATOM 22 N3 A B 18 14.128 26.572 31.070 1.00 71.58 N
ATOM 23 C4 A B 18 13.106 26.226 31.872 1.00 74.70 C
ATOM 24 P A B 19 9.363 23.520 26.950 1.00 77.17 P
ATOM 25 OP1 A B 19 8.004 23.352 26.400 1.00 80.32 O
ATOM 26 OP2 A B 19 9.867 22.562 27.969 1.00 83.34 O
ATOM 27 O5' A B 19 10.379 23.553 25.726 1.00 74.71 O
TER

Atoms:
C4: (0.456,34.278,31.439)
N3: (1.477,34.473,32.346)
OP1: (4.441,30.906,25.497)
OP2: (2.457,32.143,26.566)
C2: (2.713,33.877,32.341)
C1': (4.253,32.350,31.241)
C3': (4.606,29.999,30.990)
O5': (3.879,30.582,27.911)
O4': (4.599,32.059,29.903)
C5': (5.142,30.211,28.482)
P: (3.829,31.582,26.671)
C4': (5.275,30.782,29.870)
C2': (4.371,31.063,32.063)
O2': (5.449,31.182,32.970)
N1: (2.933,32.995,31.294)
O4: (-0.602,34.892,31.582)
O2: (3.553,34.109,33.201)
C6: (1.955,32.749,30.358)
C5: (0.755,33.345,30.394)
O3': (5.529,29.056,31.534)
OP1: (4.675,27.471,29.790)
OP2: (5.475,26.612,32.076)
C3': (9.754,25.178,28.952)
C1': (11.181,26.571,30.275)
C5': (7.617,26.231,29.893)
O4': (9.841,26.946,30.488)
C8: (11.127,25.764,32.685)
O2': (11.783,26.167,27.998)
C6: (14.464,25.805,33.777)
C5: (13.187,25.841,33.199)
C4: (13.106,26.226,31.872)
P: (5.606,27.566,30.946)
C4': (9.031,26.430,29.412)
C2': (11.230,25.541,29.140)
C2: (15.280,26.508,31.730)
N1: (15.511,26.159,33.003)
N3: (14.128,26.572,31.070)
N6: (14.695,25.434,35.037)
N7: (11.928,25.550,33.701)
N9: (11.770,26.189,31.553)
O5': (7.096,27.469,30.402)
O3': (9.457,24.996,27.567)
Image (generated by PyMOL):
PyMOL image
show in jmol