ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0670:0198

Extra

PDB:
ATOM 1 O3' G A 669 45.638 88.774 28.031 1.00 51.20 O
ATOM 2 P A A 670 46.982 88.491 27.195 1.00 53.91 P
ATOM 3 OP1 A A 670 46.653 88.264 25.763 1.00 52.23 O
ATOM 4 OP2 A A 670 47.748 87.468 27.940 1.00 51.70 O
ATOM 5 O5' A A 670 47.768 89.869 27.314 1.00 54.34 O
ATOM 6 C5' A A 670 48.954 90.119 26.547 1.00 55.10 C
ATOM 7 C4' A A 670 49.845 91.115 27.263 1.00 56.25 C
ATOM 8 O4' A A 670 49.095 92.320 27.595 1.00 57.25 O
ATOM 9 C3' A A 670 50.393 90.679 28.609 1.00 54.74 C
ATOM 10 O3' A A 670 51.514 89.827 28.434 1.00 53.69 O
ATOM 11 C2' A A 670 50.800 92.011 29.227 1.00 55.70 C
ATOM 12 O2' A A 670 52.023 92.492 28.717 1.00 56.03 O
ATOM 13 C1' A A 670 49.687 92.936 28.728 1.00 56.88 C
ATOM 14 N9 A A 670 48.655 93.216 29.729 1.00 59.44 N
ATOM 15 C8 A A 670 47.320 92.880 29.728 1.00 60.34 C
ATOM 16 N7 A A 670 46.667 93.302 30.784 1.00 60.40 N
ATOM 17 C5 A A 670 47.636 93.956 31.534 1.00 61.66 C
ATOM 18 C6 A A 670 47.588 94.630 32.772 1.00 62.78 C
ATOM 19 N6 A A 670 46.477 94.770 33.506 1.00 62.34 N
ATOM 20 N1 A A 670 48.740 95.167 33.236 1.00 62.73 N
ATOM 21 C2 A A 670 49.852 95.036 32.502 1.00 61.32 C
ATOM 22 N3 A A 670 50.022 94.435 31.331 1.00 60.76 N
ATOM 23 C4 A A 670 48.864 93.908 30.897 1.00 60.78 C
ATOM 24 P G A 671 51.557 88.406 29.179 1.00 54.83 P
ATOM 25 OP1 G A 671 52.861 87.761 28.885 1.00 54.04 O
ATOM 26 OP2 G A 671 50.296 87.687 28.849 1.00 55.40 O
ATOM 27 O5' G A 671 51.518 88.782 30.729 1.00 55.35 O
TER

ATOM 1 O3' G B 197 50.651 99.764 35.775 1.00 51.66 O
ATOM 2 P U B 198 51.497 99.120 36.973 1.00 53.08 P
ATOM 3 OP1 U B 198 50.554 98.920 38.102 1.00 54.35 O
ATOM 4 OP2 U B 198 52.707 99.950 37.167 1.00 54.73 O
ATOM 5 O5' U B 198 52.018 97.717 36.415 1.00 53.42 O
ATOM 6 C5' U B 198 51.114 96.619 36.186 1.00 52.69 C
ATOM 7 C4' U B 198 51.781 95.543 35.351 1.00 51.82 C
ATOM 8 O4' U B 198 52.431 96.170 34.217 1.00 52.46 O
ATOM 9 C3' U B 198 52.918 94.745 35.979 1.00 50.23 C
ATOM 10 O3' U B 198 52.426 93.675 36.790 1.00 47.98 O
ATOM 11 C2' U B 198 53.606 94.172 34.749 1.00 51.00 C
ATOM 12 O2' U B 198 52.907 93.060 34.239 1.00 51.83 O
ATOM 13 C1' U B 198 53.469 95.325 33.753 1.00 52.02 C
ATOM 14 N1 U B 198 54.704 96.105 33.584 1.00 53.49 N
ATOM 15 C2 U B 198 55.663 95.599 32.716 1.00 53.72 C
ATOM 16 O2 U B 198 55.498 94.585 32.058 1.00 53.91 O
ATOM 17 N3 U B 198 56.820 96.330 32.641 1.00 53.06 N
ATOM 18 C4 U B 198 57.110 97.494 33.310 1.00 51.91 C
ATOM 19 O4 U B 198 58.240 97.972 33.218 1.00 51.01 O
ATOM 20 C5 U B 198 56.057 97.977 34.154 1.00 52.81 C
ATOM 21 C6 U B 198 54.921 97.282 34.264 1.00 52.81 C
ATOM 22 P U B 199 53.415 92.912 37.803 1.00 44.16 P
ATOM 23 OP1 U B 199 52.658 91.788 38.390 1.00 46.17 O
ATOM 24 OP2 U B 199 54.014 93.919 38.698 1.00 48.64 O
ATOM 25 O5' U B 199 54.578 92.338 36.881 1.00 42.28 O
TER

Atoms:
OP1: (46.653,88.264,25.763)
OP2: (47.748,87.468,27.940)
C3': (50.393,90.679,28.609)
C1': (49.687,92.936,28.728)
C5': (48.954,90.119,26.547)
O4': (49.095,92.320,27.595)
C8: (47.320,92.880,29.728)
O2': (52.023,92.492,28.717)
C6: (47.588,94.630,32.772)
C5: (47.636,93.956,31.534)
C4: (48.864,93.908,30.897)
P: (46.982,88.491,27.195)
C4': (49.845,91.115,27.263)
C2': (50.800,92.011,29.227)
C2: (49.852,95.036,32.502)
N1: (48.740,95.167,33.236)
N3: (50.022,94.435,31.331)
N6: (46.477,94.770,33.506)
N7: (46.667,93.302,30.784)
N9: (48.655,93.216,29.729)
O5': (47.768,89.869,27.314)
O3': (51.514,89.827,28.434)
C4: (57.110,97.494,33.310)
N3: (56.820,96.330,32.641)
OP1: (50.554,98.920,38.102)
OP2: (52.707,99.950,37.167)
C2: (55.663,95.599,32.716)
C1': (53.469,95.325,33.753)
C3': (52.918,94.745,35.979)
O5': (52.018,97.717,36.415)
O4': (52.431,96.170,34.217)
C5': (51.114,96.619,36.186)
P: (51.497,99.120,36.973)
C4': (51.781,95.543,35.351)
C2': (53.606,94.172,34.749)
O2': (52.907,93.060,34.239)
N1: (54.704,96.105,33.584)
O4: (58.240,97.972,33.218)
O2: (55.498,94.585,32.058)
C6: (54.921,97.282,34.264)
C5: (56.057,97.977,34.154)
O3': (52.426,93.675,36.790)
Image (generated by PyMOL):
PyMOL image
show in jmol