ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01817:01837

Extra

PDB:
ATOM 1 O3' A A1816 114.761 119.966 56.743 1.00 44.08 O
ATOM 2 P A A1817 113.261 119.650 57.241 1.00 43.02 P
ATOM 3 OP1 A A1817 113.146 118.168 57.194 1.00 45.19 O
ATOM 4 OP2 A A1817 112.287 120.480 56.507 1.00 43.37 O
ATOM 5 O5' A A1817 113.244 120.132 58.758 1.00 43.52 O
ATOM 6 C5' A A1817 113.981 119.425 59.773 1.00 41.47 C
ATOM 7 C4' A A1817 113.789 120.095 61.106 1.00 40.92 C
ATOM 8 O4' A A1817 114.337 121.437 61.044 1.00 41.81 O
ATOM 9 C3' A A1817 112.338 120.304 61.498 1.00 40.43 C
ATOM 10 O3' A A1817 111.812 119.141 62.119 1.00 40.65 O
ATOM 11 C2' A A1817 112.431 121.477 62.460 1.00 40.42 C
ATOM 12 O2' A A1817 112.871 121.076 63.740 1.00 40.29 O
ATOM 13 C1' A A1817 113.514 122.325 61.788 1.00 39.23 C
ATOM 14 N9 A A1817 112.966 123.319 60.863 1.00 37.97 N
ATOM 15 C8 A A1817 112.885 123.244 59.496 1.00 37.72 C
ATOM 16 N7 A A1817 112.313 124.284 58.943 1.00 39.05 N
ATOM 17 C5 A A1817 112.000 125.102 60.017 1.00 37.66 C
ATOM 18 C6 A A1817 111.376 126.354 60.097 1.00 38.08 C
ATOM 19 N6 A A1817 110.923 127.031 59.039 1.00 38.92 N
ATOM 20 N1 A A1817 111.227 126.900 61.316 1.00 40.37 N
ATOM 21 C2 A A1817 111.674 126.227 62.379 1.00 40.98 C
ATOM 22 N3 A A1817 112.275 125.042 62.434 1.00 40.29 N
ATOM 23 C4 A A1817 112.408 124.526 61.203 1.00 38.71 C
ATOM 24 P U A1818 110.290 118.707 61.847 1.00 37.73 P
ATOM 25 OP1 U A1818 110.045 117.550 62.743 1.00 36.89 O
ATOM 26 OP2 U A1818 110.064 118.587 60.376 1.00 37.87 O
ATOM 27 O5' U A1818 109.413 119.947 62.319 1.00 36.35 O
TER

ATOM 1 O3' G B1836 111.115 131.703 65.674 1.00 46.57 O
ATOM 2 P U B1837 110.018 131.523 66.866 1.00 44.06 P
ATOM 3 OP1 U B1837 108.811 132.294 66.494 1.00 44.82 O
ATOM 4 OP2 U B1837 110.614 131.755 68.196 1.00 42.32 O
ATOM 5 O5' U B1837 109.658 129.969 66.803 1.00 41.35 O
ATOM 6 C5' U B1837 109.121 129.385 65.597 1.00 36.30 C
ATOM 7 C4' U B1837 109.343 127.890 65.584 1.00 36.53 C
ATOM 8 O4' U B1837 110.758 127.581 65.580 1.00 36.64 O
ATOM 9 C3' U B1837 108.803 127.138 66.788 1.00 37.81 C
ATOM 10 O3' U B1837 107.421 126.880 66.598 1.00 36.52 O
ATOM 11 C2' U B1837 109.628 125.859 66.767 1.00 36.48 C
ATOM 12 O2' U B1837 109.167 124.967 65.779 1.00 38.18 O
ATOM 13 C1' U B1837 110.993 126.391 66.321 1.00 36.35 C
ATOM 14 N1 U B1837 111.897 126.701 67.439 1.00 35.59 N
ATOM 15 C2 U B1837 112.598 125.661 68.010 1.00 34.41 C
ATOM 16 O2 U B1837 112.501 124.513 67.636 1.00 39.38 O
ATOM 17 N3 U B1837 113.420 126.015 69.042 1.00 33.90 N
ATOM 18 C4 U B1837 113.612 127.276 69.561 1.00 35.87 C
ATOM 19 O4 U B1837 114.392 127.433 70.499 1.00 36.48 O
ATOM 20 C5 U B1837 112.854 128.298 68.926 1.00 35.24 C
ATOM 21 C6 U B1837 112.040 127.984 67.910 1.00 36.07 C
ATOM 22 P C B1838 106.437 126.853 67.856 1.00 36.43 P
ATOM 23 OP1 C B1838 105.095 126.650 67.254 1.00 37.12 O
ATOM 24 OP2 C B1838 106.671 128.008 68.754 1.00 37.13 O
ATOM 25 O5' C B1838 106.890 125.556 68.660 1.00 37.63 O
TER

Atoms:
OP1: (113.146,118.168,57.194)
OP2: (112.287,120.480,56.507)
C3': (112.338,120.304,61.498)
C1': (113.514,122.325,61.788)
C5': (113.981,119.425,59.773)
O4': (114.337,121.437,61.044)
C8: (112.885,123.244,59.496)
O2': (112.871,121.076,63.740)
C6: (111.376,126.354,60.097)
C5: (112.000,125.102,60.017)
C4: (112.408,124.526,61.203)
P: (113.261,119.650,57.241)
C4': (113.789,120.095,61.106)
C2': (112.431,121.477,62.460)
C2: (111.674,126.227,62.379)
N1: (111.227,126.900,61.316)
N3: (112.275,125.042,62.434)
N6: (110.923,127.031,59.039)
N7: (112.313,124.284,58.943)
N9: (112.966,123.319,60.863)
O5': (113.244,120.132,58.758)
O3': (111.812,119.141,62.119)
C4: (113.612,127.276,69.561)
N3: (113.420,126.015,69.042)
OP1: (108.811,132.294,66.494)
OP2: (110.614,131.755,68.196)
C2: (112.598,125.661,68.010)
C1': (110.993,126.391,66.321)
C3': (108.803,127.138,66.788)
O5': (109.658,129.969,66.803)
O4': (110.758,127.581,65.580)
C5': (109.121,129.385,65.597)
P: (110.018,131.523,66.866)
C4': (109.343,127.890,65.584)
C2': (109.628,125.859,66.767)
O2': (109.167,124.967,65.779)
N1: (111.897,126.701,67.439)
O4: (114.392,127.433,70.499)
O2: (112.501,124.513,67.636)
C6: (112.040,127.984,67.910)
C5: (112.854,128.298,68.926)
O3': (107.421,126.880,66.598)
Image (generated by PyMOL):
PyMOL image
show in jmol