ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0972:981

Extra

PDB:
ATOM 1 O3' A A 971 47.906 59.674 109.673 1.00 41.00 O
ATOM 2 P A A 972 47.663 59.728 108.090 1.00 41.96 P
ATOM 3 OP1 A A 972 46.290 59.227 107.814 1.00 42.27 O
ATOM 4 OP2 A A 972 48.829 59.086 107.426 1.00 39.87 O
ATOM 5 O5' A A 972 47.709 61.288 107.779 1.00 39.92 O
ATOM 6 C5' A A 972 46.504 62.042 107.600 1.00 35.96 C
ATOM 7 C4' A A 972 45.955 62.466 108.933 1.00 34.63 C
ATOM 8 O4' A A 972 46.987 63.132 109.698 1.00 36.01 O
ATOM 9 C3' A A 972 44.844 63.486 108.839 1.00 35.36 C
ATOM 10 O3' A A 972 43.610 62.862 108.571 1.00 36.65 O
ATOM 11 C2' A A 972 44.917 64.170 110.193 1.00 36.24 C
ATOM 12 O2' A A 972 44.336 63.414 111.238 1.00 35.64 O
ATOM 13 C1' A A 972 46.432 64.239 110.390 1.00 36.56 C
ATOM 14 N9 A A 972 47.027 65.450 109.825 1.00 38.95 N
ATOM 15 C8 A A 972 47.980 65.516 108.839 1.00 38.86 C
ATOM 16 N7 A A 972 48.344 66.734 108.540 1.00 40.25 N
ATOM 17 C5 A A 972 47.581 67.531 109.382 1.00 40.55 C
ATOM 18 C6 A A 972 47.513 68.926 109.562 1.00 40.89 C
ATOM 19 N6 A A 972 48.265 69.799 108.887 1.00 39.13 N
ATOM 20 N1 A A 972 46.637 69.399 110.477 1.00 42.18 N
ATOM 21 C2 A A 972 45.897 68.524 111.166 1.00 42.92 C
ATOM 22 N3 A A 972 45.879 67.193 111.093 1.00 43.75 N
ATOM 23 C4 A A 972 46.755 66.754 110.171 1.00 40.93 C
ATOM 24 P A A 973 42.810 63.249 107.243 1.00 38.23 P
ATOM 25 OP1 A A 973 41.561 62.446 107.226 1.00 38.85 O
ATOM 26 OP2 A A 973 43.750 63.147 106.104 1.00 37.49 O
ATOM 27 O5' A A 973 42.428 64.776 107.502 1.00 36.76 O
TER

ATOM 1 O3' C B 80 47.767 72.855 114.491 1.00 39.84 O
ATOM 2 P U B 81 46.877 74.124 114.089 1.00 39.17 P
ATOM 3 OP1 U B 81 47.773 75.069 113.375 1.00 40.61 O
ATOM 4 OP2 U B 81 46.149 74.581 115.292 1.00 38.32 O
ATOM 5 O5' U B 81 45.819 73.538 113.054 1.00 38.19 O
ATOM 6 C5' U B 81 46.241 72.805 111.887 1.00 39.77 C
ATOM 7 C4' U B 81 45.041 72.195 111.194 1.00 41.53 C
ATOM 8 O4' U B 81 44.378 71.258 112.082 1.00 42.95 O
ATOM 9 C3' U B 81 43.959 73.189 110.805 1.00 40.75 C
ATOM 10 O3' U B 81 44.288 73.748 109.541 1.00 40.91 O
ATOM 11 C2' U B 81 42.700 72.330 110.754 1.00 40.88 C
ATOM 12 O2' U B 81 42.515 71.694 109.510 1.00 40.34 O
ATOM 13 C1' U B 81 42.980 71.291 111.848 1.00 41.78 C
ATOM 14 N1 U B 81 42.289 71.521 113.127 1.00 42.73 N
ATOM 15 C2 U B 81 40.962 71.120 113.228 1.00 43.29 C
ATOM 16 O2 U B 81 40.361 70.573 112.318 1.00 42.30 O
ATOM 17 N3 U B 81 40.365 71.381 114.440 1.00 43.41 N
ATOM 18 C4 U B 81 40.945 71.983 115.540 1.00 44.95 C
ATOM 19 O4 U B 81 40.264 72.190 116.546 1.00 44.15 O
ATOM 20 C5 U B 81 42.319 72.355 115.364 1.00 46.15 C
ATOM 21 C6 U B 81 42.929 72.117 114.193 1.00 44.25 C
ATOM 22 P G B 82 43.510 75.038 108.999 1.00 40.79 P
ATOM 23 OP1 G B 82 44.446 75.706 108.069 1.00 42.05 O
ATOM 24 OP2 G B 82 42.928 75.803 110.129 1.00 41.79 O
ATOM 25 O5' G B 82 42.310 74.425 108.158 1.00 41.25 O
TER

Atoms:
OP1: (46.290,59.227,107.814)
OP2: (48.829,59.086,107.426)
C3': (44.844,63.486,108.839)
C1': (46.432,64.239,110.390)
C5': (46.504,62.042,107.600)
O4': (46.987,63.132,109.698)
C8: (47.980,65.516,108.839)
O2': (44.336,63.414,111.238)
C6: (47.513,68.926,109.562)
C5: (47.581,67.531,109.382)
C4: (46.755,66.754,110.171)
P: (47.663,59.728,108.090)
C4': (45.955,62.466,108.933)
C2': (44.917,64.170,110.193)
C2: (45.897,68.524,111.166)
N1: (46.637,69.399,110.477)
N3: (45.879,67.193,111.093)
N6: (48.265,69.799,108.887)
N7: (48.344,66.734,108.540)
N9: (47.027,65.450,109.825)
O5': (47.709,61.288,107.779)
O3': (43.610,62.862,108.571)
C4: (40.945,71.983,115.540)
N3: (40.365,71.381,114.440)
OP1: (47.773,75.069,113.375)
OP2: (46.149,74.581,115.292)
C2: (40.962,71.120,113.228)
C1': (42.980,71.291,111.848)
C3': (43.959,73.189,110.805)
O5': (45.819,73.538,113.054)
O4': (44.378,71.258,112.082)
C5': (46.241,72.805,111.887)
P: (46.877,74.124,114.089)
C4': (45.041,72.195,111.194)
C2': (42.700,72.330,110.754)
O2': (42.515,71.694,109.510)
N1: (42.289,71.521,113.127)
O4: (40.264,72.190,116.546)
O2: (40.361,70.573,112.318)
C6: (42.929,72.117,114.193)
C5: (42.319,72.355,115.364)
O3': (44.288,73.748,109.541)
Image (generated by PyMOL):
PyMOL image
show in jmol