ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIL:A29:A30

Extra

PDB:
ATOM 1 O3' A A 28 3.201 53.778 19.321 1.00 30.03 O
ATOM 2 P G A 29 2.032 54.862 19.159 1.00 31.08 P
ATOM 3 OP1 G A 29 1.320 54.538 17.900 1.00 31.32 O
ATOM 4 OP2 G A 29 2.609 56.212 19.350 1.00 30.73 O
ATOM 5 O5' G A 29 1.068 54.578 20.410 1.00 31.38 O
ATOM 6 C5' G A 29 0.218 53.430 20.449 1.00 31.99 C
ATOM 7 C4' G A 29 -0.433 53.278 21.813 1.00 32.40 C
ATOM 8 O4' G A 29 0.578 53.229 22.854 1.00 32.55 O
ATOM 9 C3' G A 29 -1.340 54.426 22.229 1.00 32.78 C
ATOM 10 O3' G A 29 -2.640 54.274 21.669 1.00 33.58 O
ATOM 11 C2' G A 29 -1.328 54.299 23.750 1.00 32.61 C
ATOM 12 O2' G A 29 -2.183 53.280 24.235 1.00 32.55 O
ATOM 13 C1' G A 29 0.135 53.941 23.999 1.00 32.26 C
ATOM 14 N9 G A 29 1.001 55.105 24.217 1.00 31.99 N
ATOM 15 C8 G A 29 1.950 55.605 23.354 1.00 31.79 C
ATOM 16 N7 G A 29 2.573 56.656 23.808 1.00 31.82 N
ATOM 17 C5 G A 29 2.005 56.874 25.057 1.00 31.72 C
ATOM 18 C6 G A 29 2.281 57.877 26.022 1.00 31.80 C
ATOM 19 O6 G A 29 3.109 58.797 25.954 1.00 31.89 O
ATOM 20 N1 G A 29 1.480 57.745 27.160 1.00 31.86 N
ATOM 21 C2 G A 29 0.530 56.763 27.339 1.00 31.80 C
ATOM 22 N2 G A 29 -0.147 56.791 28.497 1.00 31.71 N
ATOM 23 N3 G A 29 0.264 55.817 26.442 1.00 31.81 N
ATOM 24 C4 G A 29 1.034 55.929 25.325 1.00 31.82 C
ATOM 25 P G A 30 -3.476 55.567 21.221 1.00 34.03 P
ATOM 26 OP1 G A 30 -4.698 55.094 20.533 1.00 34.13 O
ATOM 27 OP2 G A 30 -2.560 56.503 20.529 1.00 34.03 O
ATOM 28 O5' G A 30 -3.880 56.236 22.617 1.00 34.30 O
TER

ATOM 1 O3' G B 29 -2.640 54.274 21.669 1.00 33.58 O
ATOM 2 P G B 30 -3.476 55.567 21.221 1.00 34.03 P
ATOM 3 OP1 G B 30 -4.698 55.094 20.533 1.00 34.13 O
ATOM 4 OP2 G B 30 -2.560 56.503 20.529 1.00 34.03 O
ATOM 5 O5' G B 30 -3.880 56.236 22.617 1.00 34.30 O
ATOM 6 C5' G B 30 -4.797 55.583 23.495 1.00 34.86 C
ATOM 7 C4' G B 30 -4.992 56.385 24.768 1.00 35.16 C
ATOM 8 O4' G B 30 -3.758 56.413 25.528 1.00 35.02 O
ATOM 9 C3' G B 30 -5.341 57.850 24.554 1.00 35.45 C
ATOM 10 O3' G B 30 -6.740 58.000 24.318 1.00 36.29 O
ATOM 11 C2' G B 30 -4.877 58.470 25.869 1.00 35.16 C
ATOM 12 O2' G B 30 -5.794 58.277 26.930 1.00 35.30 O
ATOM 13 C1' G B 30 -3.588 57.688 26.127 1.00 34.79 C
ATOM 14 N9 G B 30 -2.388 58.326 25.575 1.00 34.45 N
ATOM 15 C8 G B 30 -1.700 57.952 24.444 1.00 34.22 C
ATOM 16 N7 G B 30 -0.666 58.700 24.183 1.00 34.03 N
ATOM 17 C5 G B 30 -0.663 59.638 25.205 1.00 34.08 C
ATOM 18 C6 G B 30 0.229 60.713 25.449 1.00 34.11 C
ATOM 19 O6 G B 30 1.218 61.048 24.782 1.00 34.29 O
ATOM 20 N1 G B 30 -0.115 61.434 26.594 1.00 34.09 N
ATOM 21 C2 G B 30 -1.192 61.146 27.404 1.00 34.11 C
ATOM 22 N2 G B 30 -1.367 61.948 28.465 1.00 34.10 N
ATOM 23 N3 G B 30 -2.036 60.138 27.187 1.00 34.15 N
ATOM 24 C4 G B 30 -1.715 59.425 26.073 1.00 34.18 C
ATOM 25 P C B 31 -7.278 58.984 23.170 1.00 36.75 P
ATOM 26 OP1 C B 31 -8.726 58.723 23.001 1.00 36.85 O
ATOM 27 OP2 C B 31 -6.383 58.884 21.994 1.00 36.60 O
ATOM 28 O5' C B 31 -7.074 60.431 23.826 1.00 36.83 O
TER

Atoms:
OP1: (1.320,54.538,17.900)
OP2: (2.609,56.212,19.350)
C3': (-1.340,54.426,22.229)
C1': (0.135,53.941,23.999)
C5': (0.218,53.430,20.449)
O6: (3.109,58.797,25.954)
O4': (0.578,53.229,22.854)
C8: (1.950,55.605,23.354)
C2: (0.530,56.763,27.339)
C6: (2.281,57.877,26.022)
C5: (2.005,56.874,25.057)
C4: (1.034,55.929,25.325)
P: (2.032,54.862,19.159)
C4': (-0.433,53.278,21.813)
C2': (-1.328,54.299,23.750)
O2': (-2.183,53.280,24.235)
N1: (1.480,57.745,27.160)
N2: (-0.147,56.791,28.497)
N3: (0.264,55.817,26.442)
N7: (2.573,56.656,23.808)
N9: (1.001,55.105,24.217)
O5': (1.068,54.578,20.410)
O3': (-2.640,54.274,21.669)
OP1: (-4.698,55.094,20.533)
OP2: (-2.560,56.503,20.529)
C3': (-5.341,57.850,24.554)
C1': (-3.588,57.688,26.127)
C5': (-4.797,55.583,23.495)
O6: (1.218,61.048,24.782)
O4': (-3.758,56.413,25.528)
C8: (-1.700,57.952,24.444)
C2: (-1.192,61.146,27.404)
C6: (0.229,60.713,25.449)
C5: (-0.663,59.638,25.205)
C4: (-1.715,59.425,26.073)
P: (-3.476,55.567,21.221)
C4': (-4.992,56.385,24.768)
C2': (-4.877,58.470,25.869)
O2': (-5.794,58.277,26.930)
N1: (-0.115,61.434,26.594)
N2: (-1.367,61.948,28.465)
N3: (-2.036,60.138,27.187)
N7: (-0.666,58.700,24.183)
N9: (-2.388,58.326,25.575)
O5': (-3.880,56.236,22.617)
O3': (-6.740,58.000,24.318)
Image (generated by PyMOL):
PyMOL image
show in jmol