ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1327:A702

Extra

PDB:
ATOM 1 O3' G A1326 32.001 -37.659 -36.356 1.00 39.92 O
ATOM 2 P A A1327 30.603 -38.174 -35.783 1.00 32.68 P
ATOM 3 OP1 A A1327 30.773 -39.629 -35.484 1.00 23.52 O
ATOM 4 OP2 A A1327 29.558 -37.761 -36.742 1.00 45.75 O
ATOM 5 O5' A A1327 30.448 -37.342 -34.415 1.00 33.06 O
ATOM 6 C5' A A1327 30.818 -37.927 -33.159 1.00 31.36 C
ATOM 7 C4' A A1327 30.345 -37.116 -31.971 1.00 27.04 C
ATOM 8 O4' A A1327 30.839 -35.774 -32.120 1.00 40.98 O
ATOM 9 C3' A A1327 28.828 -36.971 -31.812 1.00 38.81 C
ATOM 10 O3' A A1327 28.251 -37.865 -30.823 1.00 54.62 O
ATOM 11 C2' A A1327 28.607 -35.509 -31.391 1.00 29.93 C
ATOM 12 O2' A A1327 28.073 -35.351 -30.103 1.00 37.62 O
ATOM 13 C1' A A1327 29.976 -34.873 -31.463 1.00 34.93 C
ATOM 14 N9 A A1327 29.962 -33.591 -32.173 1.00 35.19 N
ATOM 15 C8 A A1327 29.459 -33.259 -33.399 1.00 34.85 C
ATOM 16 N7 A A1327 29.570 -31.981 -33.673 1.00 35.11 N
ATOM 17 C5 A A1327 30.150 -31.434 -32.546 1.00 36.20 C
ATOM 18 C6 A A1327 30.558 -30.129 -32.180 1.00 36.01 C
ATOM 19 N6 A A1327 30.448 -29.026 -32.912 1.00 34.43 N
ATOM 20 N1 A A1327 31.125 -29.968 -30.972 1.00 39.62 N
ATOM 21 C2 A A1327 31.275 -31.043 -30.178 1.00 40.34 C
ATOM 22 N3 A A1327 30.940 -32.314 -30.408 1.00 37.84 N
ATOM 23 C4 A A1327 30.376 -32.428 -31.618 1.00 36.58 C
ATOM 24 P A A1328 29.085 -38.538 -29.628 1.00 44.97 P
ATOM 25 OP1 A A1328 30.178 -37.610 -29.261 1.00 60.25 O
ATOM 26 OP2 A A1328 29.414 -39.924 -30.050 1.00 54.52 O
ATOM 27 O5' A A1328 28.018 -38.580 -28.472 1.00 43.68 O
TER

ATOM 1 O3' C B 701 36.174 -25.539 -29.701 1.00 39.03 O
ATOM 2 P U B 702 35.278 -25.146 -28.425 1.00 41.79 P
ATOM 3 OP1 U B 702 34.292 -24.143 -28.873 1.00 34.70 O
ATOM 4 OP2 U B 702 36.199 -24.775 -27.338 1.00 50.72 O
ATOM 5 O5' U B 702 34.543 -26.514 -28.076 1.00 30.57 O
ATOM 6 C5' U B 702 33.517 -27.032 -28.907 1.00 30.00 C
ATOM 7 C4' U B 702 32.898 -28.270 -28.309 1.00 35.23 C
ATOM 8 O4' U B 702 33.878 -29.333 -28.265 1.00 40.39 O
ATOM 9 C3' U B 702 32.416 -28.137 -26.876 1.00 31.49 C
ATOM 10 O3' U B 702 31.118 -27.613 -26.807 1.00 25.82 O
ATOM 11 C2' U B 702 32.502 -29.553 -26.344 1.00 32.22 C
ATOM 12 O2' U B 702 31.353 -30.282 -26.717 1.00 31.86 O
ATOM 13 C1' U B 702 33.704 -30.110 -27.103 1.00 36.24 C
ATOM 14 N1 U B 702 34.942 -30.039 -26.300 1.00 38.31 N
ATOM 15 C2 U B 702 35.129 -31.003 -25.321 1.00 40.25 C
ATOM 16 O2 U B 702 34.347 -31.897 -25.077 1.00 46.26 O
ATOM 17 N3 U B 702 36.269 -30.892 -24.595 1.00 36.06 N
ATOM 18 C4 U B 702 37.230 -29.935 -24.755 1.00 34.74 C
ATOM 19 O4 U B 702 38.189 -29.991 -24.001 1.00 48.99 O
ATOM 20 C5 U B 702 37.000 -28.979 -25.792 1.00 32.10 C
ATOM 21 C6 U B 702 35.879 -29.055 -26.508 1.00 36.77 C
ATOM 22 P G B 703 30.462 -27.262 -25.394 1.00 33.32 P
ATOM 23 OP1 G B 703 29.015 -27.103 -25.616 1.00 45.51 O
ATOM 24 OP2 G B 703 31.206 -26.131 -24.835 1.00 31.17 O
ATOM 25 O5' G B 703 30.728 -28.567 -24.540 1.00 30.97 O
TER

Atoms:
OP1: (30.773,-39.629,-35.484)
OP2: (29.558,-37.761,-36.742)
C3': (28.828,-36.971,-31.812)
C1': (29.976,-34.873,-31.463)
C5': (30.818,-37.927,-33.159)
O4': (30.839,-35.774,-32.120)
C8: (29.459,-33.259,-33.399)
O2': (28.073,-35.351,-30.103)
C6: (30.558,-30.129,-32.180)
C5: (30.150,-31.434,-32.546)
C4: (30.376,-32.428,-31.618)
P: (30.603,-38.174,-35.783)
C4': (30.345,-37.116,-31.971)
C2': (28.607,-35.509,-31.391)
C2: (31.275,-31.043,-30.178)
N1: (31.125,-29.968,-30.972)
N3: (30.940,-32.314,-30.408)
N6: (30.448,-29.026,-32.912)
N7: (29.570,-31.981,-33.673)
N9: (29.962,-33.591,-32.173)
O5': (30.448,-37.342,-34.415)
O3': (28.251,-37.865,-30.823)
C4: (37.230,-29.935,-24.755)
N3: (36.269,-30.892,-24.595)
OP1: (34.292,-24.143,-28.873)
OP2: (36.199,-24.775,-27.338)
C2: (35.129,-31.003,-25.321)
C1': (33.704,-30.110,-27.103)
C3': (32.416,-28.137,-26.876)
O5': (34.543,-26.514,-28.076)
O4': (33.878,-29.333,-28.265)
C5': (33.517,-27.032,-28.907)
P: (35.278,-25.146,-28.425)
C4': (32.898,-28.270,-28.309)
C2': (32.502,-29.553,-26.344)
O2': (31.353,-30.282,-26.717)
N1: (34.942,-30.039,-26.300)
O4: (38.189,-29.991,-24.001)
O2: (34.347,-31.897,-25.077)
C6: (35.879,-29.055,-26.508)
C5: (37.000,-28.979,-25.792)
O3': (31.118,-27.613,-26.807)
Image (generated by PyMOL):
PyMOL image
show in jmol