Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0948:0968
Extra
PDB:
ATOM 1 O3' G A 947 64.701 53.076 120.321 1.00 79.17 O
ATOM 2 P A A 948 63.207 52.571 119.964 1.00 76.52 P
ATOM 3 OP1 A A 948 62.223 53.527 120.534 1.00 77.59 O
ATOM 4 OP2 A A 948 63.090 51.130 120.295 1.00 77.14 O
ATOM 5 O5' A A 948 63.144 52.681 118.376 1.00 72.60 O
ATOM 6 C5' A A 948 63.851 51.748 117.537 1.00 63.70 C
ATOM 7 C4' A A 948 64.134 52.365 116.189 1.00 58.93 C
ATOM 8 O4' A A 948 62.883 52.790 115.580 1.00 57.81 O
ATOM 9 C3' A A 948 64.992 53.619 116.206 1.00 56.11 C
ATOM 10 O3' A A 948 66.376 53.290 116.254 1.00 52.97 O
ATOM 11 C2' A A 948 64.583 54.303 114.909 1.00 55.40 C
ATOM 12 O2' A A 948 65.187 53.722 113.775 1.00 53.20 O
ATOM 13 C1' A A 948 63.078 54.010 114.881 1.00 56.33 C
ATOM 14 N9 A A 948 62.271 55.046 115.539 1.00 56.42 N
ATOM 15 C8 A A 948 61.436 54.894 116.622 1.00 56.70 C
ATOM 16 N7 A A 948 60.860 56.007 117.008 1.00 57.16 N
ATOM 17 C5 A A 948 61.341 56.957 116.117 1.00 55.79 C
ATOM 18 C6 A A 948 61.111 58.337 115.991 1.00 54.07 C
ATOM 19 N6 A A 948 60.307 59.033 116.792 1.00 53.15 N
ATOM 20 N1 A A 948 61.742 58.988 114.997 1.00 53.81 N
ATOM 21 C2 A A 948 62.548 58.297 114.189 1.00 53.42 C
ATOM 22 N3 A A 948 62.847 57.005 114.204 1.00 55.33 N
ATOM 23 C4 A A 948 62.205 56.380 115.204 1.00 55.92 C
ATOM 24 P C A 949 67.462 54.423 116.608 1.00 51.69 P
ATOM 25 OP1 C A 949 68.593 53.775 117.307 1.00 54.65 O
ATOM 26 OP2 C A 949 66.781 55.580 117.243 1.00 53.31 O
ATOM 27 O5' C A 949 68.008 54.879 115.188 1.00 51.36 O
TER
ATOM 1 O3' C B 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 2 P U B 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 3 OP1 U B 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 4 OP2 U B 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 5 O5' U B 968 63.728 61.067 108.606 1.00 40.59 O
ATOM 6 C5' U B 968 64.339 59.901 109.184 1.00 42.09 C
ATOM 7 C4' U B 968 63.376 59.227 110.137 1.00 43.87 C
ATOM 8 O4' U B 968 62.931 60.192 111.135 1.00 44.72 O
ATOM 9 C3' U B 968 62.105 58.664 109.510 1.00 44.05 C
ATOM 10 O3' U B 968 61.694 57.533 110.261 1.00 45.01 O
ATOM 11 C2' U B 968 61.101 59.792 109.712 1.00 43.41 C
ATOM 12 O2' U B 968 59.763 59.340 109.753 1.00 41.68 O
ATOM 13 C1' U B 968 61.524 60.327 111.077 1.00 44.33 C
ATOM 14 N1 U B 968 61.184 61.742 111.285 1.00 46.25 N
ATOM 15 C2 U B 968 60.141 62.042 112.148 1.00 47.27 C
ATOM 16 O2 U B 968 59.483 61.190 112.720 1.00 46.41 O
ATOM 17 N3 U B 968 59.894 63.382 112.314 1.00 48.31 N
ATOM 18 C4 U B 968 60.563 64.432 111.715 1.00 47.84 C
ATOM 19 O4 U B 968 60.236 65.591 111.977 1.00 47.37 O
ATOM 20 C5 U B 968 61.614 64.040 110.830 1.00 48.48 C
ATOM 21 C6 U B 968 61.881 62.743 110.648 1.00 47.76 C
ATOM 22 P C B 969 61.650 56.085 109.573 1.00 47.42 P
ATOM 23 OP1 C B 969 63.040 55.571 109.515 1.00 44.91 O
ATOM 24 OP2 C B 969 60.854 56.181 108.322 1.00 47.09 O
ATOM 25 O5' C B 969 60.812 55.236 110.631 1.00 47.30 O
TER
ATOM 2 P A A 948 63.207 52.571 119.964 1.00 76.52 P
ATOM 3 OP1 A A 948 62.223 53.527 120.534 1.00 77.59 O
ATOM 4 OP2 A A 948 63.090 51.130 120.295 1.00 77.14 O
ATOM 5 O5' A A 948 63.144 52.681 118.376 1.00 72.60 O
ATOM 6 C5' A A 948 63.851 51.748 117.537 1.00 63.70 C
ATOM 7 C4' A A 948 64.134 52.365 116.189 1.00 58.93 C
ATOM 8 O4' A A 948 62.883 52.790 115.580 1.00 57.81 O
ATOM 9 C3' A A 948 64.992 53.619 116.206 1.00 56.11 C
ATOM 10 O3' A A 948 66.376 53.290 116.254 1.00 52.97 O
ATOM 11 C2' A A 948 64.583 54.303 114.909 1.00 55.40 C
ATOM 12 O2' A A 948 65.187 53.722 113.775 1.00 53.20 O
ATOM 13 C1' A A 948 63.078 54.010 114.881 1.00 56.33 C
ATOM 14 N9 A A 948 62.271 55.046 115.539 1.00 56.42 N
ATOM 15 C8 A A 948 61.436 54.894 116.622 1.00 56.70 C
ATOM 16 N7 A A 948 60.860 56.007 117.008 1.00 57.16 N
ATOM 17 C5 A A 948 61.341 56.957 116.117 1.00 55.79 C
ATOM 18 C6 A A 948 61.111 58.337 115.991 1.00 54.07 C
ATOM 19 N6 A A 948 60.307 59.033 116.792 1.00 53.15 N
ATOM 20 N1 A A 948 61.742 58.988 114.997 1.00 53.81 N
ATOM 21 C2 A A 948 62.548 58.297 114.189 1.00 53.42 C
ATOM 22 N3 A A 948 62.847 57.005 114.204 1.00 55.33 N
ATOM 23 C4 A A 948 62.205 56.380 115.204 1.00 55.92 C
ATOM 24 P C A 949 67.462 54.423 116.608 1.00 51.69 P
ATOM 25 OP1 C A 949 68.593 53.775 117.307 1.00 54.65 O
ATOM 26 OP2 C A 949 66.781 55.580 117.243 1.00 53.31 O
ATOM 27 O5' C A 949 68.008 54.879 115.188 1.00 51.36 O
TER
ATOM 1 O3' C B 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 2 P U B 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 3 OP1 U B 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 4 OP2 U B 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 5 O5' U B 968 63.728 61.067 108.606 1.00 40.59 O
ATOM 6 C5' U B 968 64.339 59.901 109.184 1.00 42.09 C
ATOM 7 C4' U B 968 63.376 59.227 110.137 1.00 43.87 C
ATOM 8 O4' U B 968 62.931 60.192 111.135 1.00 44.72 O
ATOM 9 C3' U B 968 62.105 58.664 109.510 1.00 44.05 C
ATOM 10 O3' U B 968 61.694 57.533 110.261 1.00 45.01 O
ATOM 11 C2' U B 968 61.101 59.792 109.712 1.00 43.41 C
ATOM 12 O2' U B 968 59.763 59.340 109.753 1.00 41.68 O
ATOM 13 C1' U B 968 61.524 60.327 111.077 1.00 44.33 C
ATOM 14 N1 U B 968 61.184 61.742 111.285 1.00 46.25 N
ATOM 15 C2 U B 968 60.141 62.042 112.148 1.00 47.27 C
ATOM 16 O2 U B 968 59.483 61.190 112.720 1.00 46.41 O
ATOM 17 N3 U B 968 59.894 63.382 112.314 1.00 48.31 N
ATOM 18 C4 U B 968 60.563 64.432 111.715 1.00 47.84 C
ATOM 19 O4 U B 968 60.236 65.591 111.977 1.00 47.37 O
ATOM 20 C5 U B 968 61.614 64.040 110.830 1.00 48.48 C
ATOM 21 C6 U B 968 61.881 62.743 110.648 1.00 47.76 C
ATOM 22 P C B 969 61.650 56.085 109.573 1.00 47.42 P
ATOM 23 OP1 C B 969 63.040 55.571 109.515 1.00 44.91 O
ATOM 24 OP2 C B 969 60.854 56.181 108.322 1.00 47.09 O
ATOM 25 O5' C B 969 60.812 55.236 110.631 1.00 47.30 O
TER
Atoms:
OP1: (62.223,53.527,120.534)
OP2: (63.090,51.130,120.295)
C3': (64.992,53.619,116.206)
C1': (63.078,54.010,114.881)
C5': (63.851,51.748,117.537)
O4': (62.883,52.790,115.580)
C8: (61.436,54.894,116.622)
O2': (65.187,53.722,113.775)
C6: (61.111,58.337,115.991)
C5: (61.341,56.957,116.117)
C4: (62.205,56.380,115.204)
P: (63.207,52.571,119.964)
C4': (64.134,52.365,116.189)
C2': (64.583,54.303,114.909)
C2: (62.548,58.297,114.189)
N1: (61.742,58.988,114.997)
N3: (62.847,57.005,114.204)
N6: (60.307,59.033,116.792)
N7: (60.860,56.007,117.008)
N9: (62.271,55.046,115.539)
O5': (63.144,52.681,118.376)
O3': (66.376,53.290,116.254)
OP2: (63.090,51.130,120.295)
C3': (64.992,53.619,116.206)
C1': (63.078,54.010,114.881)
C5': (63.851,51.748,117.537)
O4': (62.883,52.790,115.580)
C8: (61.436,54.894,116.622)
O2': (65.187,53.722,113.775)
C6: (61.111,58.337,115.991)
C5: (61.341,56.957,116.117)
C4: (62.205,56.380,115.204)
P: (63.207,52.571,119.964)
C4': (64.134,52.365,116.189)
C2': (64.583,54.303,114.909)
C2: (62.548,58.297,114.189)
N1: (61.742,58.988,114.997)
N3: (62.847,57.005,114.204)
N6: (60.307,59.033,116.792)
N7: (60.860,56.007,117.008)
N9: (62.271,55.046,115.539)
O5': (63.144,52.681,118.376)
O3': (66.376,53.290,116.254)
C4: (60.563,64.432,111.715)
N3: (59.894,63.382,112.314)
OP1: (65.012,60.888,106.463)
OP2: (63.404,62.838,106.923)
C2: (60.141,62.042,112.148)
C1': (61.524,60.327,111.077)
C3': (62.105,58.664,109.510)
O5': (63.728,61.067,108.606)
O4': (62.931,60.192,111.135)
C5': (64.339,59.901,109.184)
P: (64.421,61.869,107.416)
C4': (63.376,59.227,110.137)
C2': (61.101,59.792,109.712)
O2': (59.763,59.340,109.753)
N1: (61.184,61.742,111.285)
O4: (60.236,65.591,111.977)
O2: (59.483,61.190,112.720)
C6: (61.881,62.743,110.648)
C5: (61.614,64.040,110.830)
O3': (61.694,57.533,110.261)
N3: (59.894,63.382,112.314)
OP1: (65.012,60.888,106.463)
OP2: (63.404,62.838,106.923)
C2: (60.141,62.042,112.148)
C1': (61.524,60.327,111.077)
C3': (62.105,58.664,109.510)
O5': (63.728,61.067,108.606)
O4': (62.931,60.192,111.135)
C5': (64.339,59.901,109.184)
P: (64.421,61.869,107.416)
C4': (63.376,59.227,110.137)
C2': (61.101,59.792,109.712)
O2': (59.763,59.340,109.753)
N1: (61.184,61.742,111.285)
O4: (60.236,65.591,111.977)
O2: (59.483,61.190,112.720)
C6: (61.881,62.743,110.648)
C5: (61.614,64.040,110.830)
O3': (61.694,57.533,110.261)
Image (generated by PyMOL):