Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1850:1863
Extra
PDB:
ATOM 1 O3' U A 849 24.070 -1.841 111.771 1.00 40.85 O
ATOM 2 P A A 850 25.494 -2.481 111.609 1.00 40.52 P
ATOM 3 OP1 A A 850 25.334 -3.926 111.402 1.00 40.39 O
ATOM 4 OP2 A A 850 26.288 -2.024 112.738 1.00 40.84 O
ATOM 5 O5' A A 850 25.969 -1.813 110.282 1.00 40.18 O
ATOM 6 C5' A A 850 25.369 -2.165 109.062 1.00 39.85 C
ATOM 7 C4' A A 850 26.407 -2.419 108.029 1.00 39.52 C
ATOM 8 O4' A A 850 27.051 -1.143 107.652 1.00 39.47 O
ATOM 9 C3' A A 850 27.528 -3.339 108.482 1.00 39.54 C
ATOM 10 O3' A A 850 27.894 -4.186 107.401 1.00 39.20 O
ATOM 11 C2' A A 850 28.669 -2.350 108.759 1.00 39.62 C
ATOM 12 O2' A A 850 29.938 -2.899 108.644 1.00 39.52 O
ATOM 13 C1' A A 850 28.436 -1.304 107.691 1.00 39.42 C
ATOM 14 N9 A A 850 29.040 -0.020 107.983 1.00 39.56 N
ATOM 15 C8 A A 850 29.808 0.317 109.060 1.00 39.85 C
ATOM 16 N7 A A 850 30.228 1.563 109.036 1.00 39.93 N
ATOM 17 C5 A A 850 29.723 2.060 107.873 1.00 39.68 C
ATOM 18 C6 A A 850 29.789 3.305 107.304 1.00 39.64 C
ATOM 19 N6 A A 850 30.473 4.262 107.897 1.00 39.87 N
ATOM 20 N1 A A 850 29.162 3.564 106.125 1.00 39.39 N
ATOM 21 C2 A A 850 28.498 2.567 105.571 1.00 39.18 C
ATOM 22 N3 A A 850 28.352 1.324 106.038 1.00 39.19 N
ATOM 23 C4 A A 850 28.982 1.124 107.211 1.00 39.45 C
ATOM 24 P G A 851 28.173 -5.746 107.628 1.00 35.05 P
ATOM 25 OP1 G A 851 26.988 -6.324 108.349 1.00 35.26 O
ATOM 26 OP2 G A 851 29.521 -5.893 108.239 1.00 35.16 O
ATOM 27 O5' G A 851 28.202 -6.271 106.134 1.00 34.65 O
TER
ATOM 1 O3' C B 862 25.064 8.433 97.706 1.00 38.58 O
ATOM 2 P U B 863 26.513 7.754 97.613 1.00 38.16 P
ATOM 3 OP1 U B 863 27.470 8.861 97.597 1.00 38.24 O
ATOM 4 OP2 U B 863 26.549 6.818 96.481 1.00 37.83 O
ATOM 5 O5' U B 863 26.607 6.942 98.984 1.00 38.34 O
ATOM 6 C5' U B 863 26.663 7.602 100.227 1.00 38.67 C
ATOM 7 C4' U B 863 26.848 6.628 101.351 1.00 38.79 C
ATOM 8 O4' U B 863 25.734 5.737 101.380 1.00 38.76 O
ATOM 9 C3' U B 863 28.050 5.711 101.251 1.00 38.61 C
ATOM 10 O3' U B 863 29.248 6.327 101.737 1.00 38.74 O
ATOM 11 C2' U B 863 27.600 4.490 102.052 1.00 38.68 C
ATOM 12 O2' U B 863 27.690 4.736 103.435 1.00 39.02 O
ATOM 13 C1' U B 863 26.136 4.437 101.713 1.00 38.67 C
ATOM 14 N1 U B 863 25.872 3.574 100.577 1.00 38.36 N
ATOM 15 C2 U B 863 25.780 2.228 100.842 1.00 38.30 C
ATOM 16 O2 U B 863 25.918 1.764 101.945 1.00 38.49 O
ATOM 17 N3 U B 863 25.550 1.427 99.774 1.00 38.02 N
ATOM 18 C4 U B 863 25.434 1.891 98.507 1.00 37.80 C
ATOM 19 O4 U B 863 25.249 1.057 97.676 1.00 37.58 O
ATOM 20 C5 U B 863 25.526 3.302 98.274 1.00 37.87 C
ATOM 21 C6 U B 863 25.724 4.098 99.318 1.00 38.15 C
ATOM 22 P A B 864 30.630 6.122 100.966 1.00 36.60 P
ATOM 23 OP1 A B 864 30.296 5.546 99.653 1.00 36.26 O
ATOM 24 OP2 A B 864 31.518 5.360 101.857 1.00 36.69 O
ATOM 25 O5' A B 864 31.185 7.581 100.836 1.00 36.71 O
TER
ATOM 2 P A A 850 25.494 -2.481 111.609 1.00 40.52 P
ATOM 3 OP1 A A 850 25.334 -3.926 111.402 1.00 40.39 O
ATOM 4 OP2 A A 850 26.288 -2.024 112.738 1.00 40.84 O
ATOM 5 O5' A A 850 25.969 -1.813 110.282 1.00 40.18 O
ATOM 6 C5' A A 850 25.369 -2.165 109.062 1.00 39.85 C
ATOM 7 C4' A A 850 26.407 -2.419 108.029 1.00 39.52 C
ATOM 8 O4' A A 850 27.051 -1.143 107.652 1.00 39.47 O
ATOM 9 C3' A A 850 27.528 -3.339 108.482 1.00 39.54 C
ATOM 10 O3' A A 850 27.894 -4.186 107.401 1.00 39.20 O
ATOM 11 C2' A A 850 28.669 -2.350 108.759 1.00 39.62 C
ATOM 12 O2' A A 850 29.938 -2.899 108.644 1.00 39.52 O
ATOM 13 C1' A A 850 28.436 -1.304 107.691 1.00 39.42 C
ATOM 14 N9 A A 850 29.040 -0.020 107.983 1.00 39.56 N
ATOM 15 C8 A A 850 29.808 0.317 109.060 1.00 39.85 C
ATOM 16 N7 A A 850 30.228 1.563 109.036 1.00 39.93 N
ATOM 17 C5 A A 850 29.723 2.060 107.873 1.00 39.68 C
ATOM 18 C6 A A 850 29.789 3.305 107.304 1.00 39.64 C
ATOM 19 N6 A A 850 30.473 4.262 107.897 1.00 39.87 N
ATOM 20 N1 A A 850 29.162 3.564 106.125 1.00 39.39 N
ATOM 21 C2 A A 850 28.498 2.567 105.571 1.00 39.18 C
ATOM 22 N3 A A 850 28.352 1.324 106.038 1.00 39.19 N
ATOM 23 C4 A A 850 28.982 1.124 107.211 1.00 39.45 C
ATOM 24 P G A 851 28.173 -5.746 107.628 1.00 35.05 P
ATOM 25 OP1 G A 851 26.988 -6.324 108.349 1.00 35.26 O
ATOM 26 OP2 G A 851 29.521 -5.893 108.239 1.00 35.16 O
ATOM 27 O5' G A 851 28.202 -6.271 106.134 1.00 34.65 O
TER
ATOM 1 O3' C B 862 25.064 8.433 97.706 1.00 38.58 O
ATOM 2 P U B 863 26.513 7.754 97.613 1.00 38.16 P
ATOM 3 OP1 U B 863 27.470 8.861 97.597 1.00 38.24 O
ATOM 4 OP2 U B 863 26.549 6.818 96.481 1.00 37.83 O
ATOM 5 O5' U B 863 26.607 6.942 98.984 1.00 38.34 O
ATOM 6 C5' U B 863 26.663 7.602 100.227 1.00 38.67 C
ATOM 7 C4' U B 863 26.848 6.628 101.351 1.00 38.79 C
ATOM 8 O4' U B 863 25.734 5.737 101.380 1.00 38.76 O
ATOM 9 C3' U B 863 28.050 5.711 101.251 1.00 38.61 C
ATOM 10 O3' U B 863 29.248 6.327 101.737 1.00 38.74 O
ATOM 11 C2' U B 863 27.600 4.490 102.052 1.00 38.68 C
ATOM 12 O2' U B 863 27.690 4.736 103.435 1.00 39.02 O
ATOM 13 C1' U B 863 26.136 4.437 101.713 1.00 38.67 C
ATOM 14 N1 U B 863 25.872 3.574 100.577 1.00 38.36 N
ATOM 15 C2 U B 863 25.780 2.228 100.842 1.00 38.30 C
ATOM 16 O2 U B 863 25.918 1.764 101.945 1.00 38.49 O
ATOM 17 N3 U B 863 25.550 1.427 99.774 1.00 38.02 N
ATOM 18 C4 U B 863 25.434 1.891 98.507 1.00 37.80 C
ATOM 19 O4 U B 863 25.249 1.057 97.676 1.00 37.58 O
ATOM 20 C5 U B 863 25.526 3.302 98.274 1.00 37.87 C
ATOM 21 C6 U B 863 25.724 4.098 99.318 1.00 38.15 C
ATOM 22 P A B 864 30.630 6.122 100.966 1.00 36.60 P
ATOM 23 OP1 A B 864 30.296 5.546 99.653 1.00 36.26 O
ATOM 24 OP2 A B 864 31.518 5.360 101.857 1.00 36.69 O
ATOM 25 O5' A B 864 31.185 7.581 100.836 1.00 36.71 O
TER
Atoms:
OP1: (25.334,-3.926,111.402)
OP2: (26.288,-2.024,112.738)
C3': (27.528,-3.339,108.482)
C1': (28.436,-1.304,107.691)
C5': (25.369,-2.165,109.062)
O4': (27.051,-1.143,107.652)
C8: (29.808,0.317,109.060)
O2': (29.938,-2.899,108.644)
C6: (29.789,3.305,107.304)
C5: (29.723,2.060,107.873)
C4: (28.982,1.124,107.211)
P: (25.494,-2.481,111.609)
C4': (26.407,-2.419,108.029)
C2': (28.669,-2.350,108.759)
C2: (28.498,2.567,105.571)
N1: (29.162,3.564,106.125)
N3: (28.352,1.324,106.038)
N6: (30.473,4.262,107.897)
N7: (30.228,1.563,109.036)
N9: (29.040,-0.020,107.983)
O5': (25.969,-1.813,110.282)
O3': (27.894,-4.186,107.401)
OP2: (26.288,-2.024,112.738)
C3': (27.528,-3.339,108.482)
C1': (28.436,-1.304,107.691)
C5': (25.369,-2.165,109.062)
O4': (27.051,-1.143,107.652)
C8: (29.808,0.317,109.060)
O2': (29.938,-2.899,108.644)
C6: (29.789,3.305,107.304)
C5: (29.723,2.060,107.873)
C4: (28.982,1.124,107.211)
P: (25.494,-2.481,111.609)
C4': (26.407,-2.419,108.029)
C2': (28.669,-2.350,108.759)
C2: (28.498,2.567,105.571)
N1: (29.162,3.564,106.125)
N3: (28.352,1.324,106.038)
N6: (30.473,4.262,107.897)
N7: (30.228,1.563,109.036)
N9: (29.040,-0.020,107.983)
O5': (25.969,-1.813,110.282)
O3': (27.894,-4.186,107.401)
C4: (25.434,1.891,98.507)
N3: (25.550,1.427,99.774)
OP1: (27.470,8.861,97.597)
OP2: (26.549,6.818,96.481)
C2: (25.780,2.228,100.842)
C1': (26.136,4.437,101.713)
C3': (28.050,5.711,101.251)
O5': (26.607,6.942,98.984)
O4': (25.734,5.737,101.380)
C5': (26.663,7.602,100.227)
P: (26.513,7.754,97.613)
C4': (26.848,6.628,101.351)
C2': (27.600,4.490,102.052)
O2': (27.690,4.736,103.435)
N1: (25.872,3.574,100.577)
O4: (25.249,1.057,97.676)
O2: (25.918,1.764,101.945)
C6: (25.724,4.098,99.318)
C5: (25.526,3.302,98.274)
O3': (29.248,6.327,101.737)
N3: (25.550,1.427,99.774)
OP1: (27.470,8.861,97.597)
OP2: (26.549,6.818,96.481)
C2: (25.780,2.228,100.842)
C1': (26.136,4.437,101.713)
C3': (28.050,5.711,101.251)
O5': (26.607,6.942,98.984)
O4': (25.734,5.737,101.380)
C5': (26.663,7.602,100.227)
P: (26.513,7.754,97.613)
C4': (26.848,6.628,101.351)
C2': (27.600,4.490,102.052)
O2': (27.690,4.736,103.435)
N1: (25.872,3.574,100.577)
O4: (25.249,1.057,97.676)
O2: (25.918,1.764,101.945)
C6: (25.724,4.098,99.318)
C5: (25.526,3.302,98.274)
O3': (29.248,6.327,101.737)
Image (generated by PyMOL):