Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B8:B9
Extra
PDB:
ATOM 1 O3' G A 7 -25.166 42.890 -15.908 1.00 44.16 O
ATOM 2 P G A 8 -24.451 41.585 -15.326 1.00 47.77 P
ATOM 3 OP1 G A 8 -24.328 40.593 -16.419 1.00 44.51 O
ATOM 4 OP2 G A 8 -25.120 41.212 -14.059 1.00 44.24 O
ATOM 5 O5' G A 8 -22.992 42.145 -14.992 1.00 42.86 O
ATOM 6 C5' G A 8 -22.241 42.804 -16.003 1.00 38.20 C
ATOM 7 C4' G A 8 -20.939 43.318 -15.423 1.00 36.80 C
ATOM 8 O4' G A 8 -21.214 44.409 -14.508 1.00 37.92 O
ATOM 9 C3' G A 8 -20.185 42.310 -14.569 1.00 38.60 C
ATOM 10 O3' G A 8 -19.430 41.422 -15.378 1.00 36.71 O
ATOM 11 C2' G A 8 -19.294 43.254 -13.774 1.00 35.16 C
ATOM 12 O2' G A 8 -18.249 43.793 -14.556 1.00 31.68 O
ATOM 13 C1' G A 8 -20.301 44.344 -13.428 1.00 37.89 C
ATOM 14 N9 G A 8 -21.030 44.050 -12.200 1.00 32.99 N
ATOM 15 C8 G A 8 -22.338 43.653 -12.070 1.00 38.64 C
ATOM 16 N7 G A 8 -22.700 43.463 -10.830 1.00 40.53 N
ATOM 17 C5 G A 8 -21.559 43.751 -10.092 1.00 36.77 C
ATOM 18 C6 G A 8 -21.338 43.723 -8.693 1.00 40.13 C
ATOM 19 O6 G A 8 -22.136 43.427 -7.792 1.00 40.91 O
ATOM 20 N1 G A 8 -20.031 44.085 -8.372 1.00 36.98 N
ATOM 21 C2 G A 8 -19.064 44.432 -9.287 1.00 37.18 C
ATOM 22 N2 G A 8 -17.859 44.753 -8.796 1.00 34.90 N
ATOM 23 N3 G A 8 -19.259 44.462 -10.596 1.00 37.39 N
ATOM 24 C4 G A 8 -20.524 44.111 -10.924 1.00 36.57 C
ATOM 25 P G A 9 -19.192 39.913 -14.906 1.00 43.18 P
ATOM 26 OP1 G A 9 -18.437 39.240 -15.986 1.00 36.28 O
ATOM 27 OP2 G A 9 -20.485 39.360 -14.438 1.00 37.47 O
ATOM 28 O5' G A 9 -18.220 40.063 -13.643 1.00 34.58 O
TER
ATOM 1 O3' G B 8 -19.430 41.422 -15.378 1.00 36.71 O
ATOM 2 P G B 9 -19.192 39.913 -14.906 1.00 43.18 P
ATOM 3 OP1 G B 9 -18.437 39.240 -15.986 1.00 36.28 O
ATOM 4 OP2 G B 9 -20.485 39.360 -14.438 1.00 37.47 O
ATOM 5 O5' G B 9 -18.220 40.063 -13.643 1.00 34.58 O
ATOM 6 C5' G B 9 -16.939 40.649 -13.808 1.00 32.12 C
ATOM 7 C4' G B 9 -16.267 40.877 -12.466 1.00 35.67 C
ATOM 8 O4' G B 9 -17.110 41.694 -11.618 1.00 33.05 O
ATOM 9 C3' G B 9 -16.019 39.629 -11.633 1.00 34.35 C
ATOM 10 O3' G B 9 -14.860 38.952 -12.117 1.00 30.62 O
ATOM 11 C2' G B 9 -15.783 40.272 -10.269 1.00 34.51 C
ATOM 12 O2' G B 9 -14.480 40.806 -10.153 1.00 35.46 O
ATOM 13 C1' G B 9 -16.798 41.415 -10.266 1.00 34.19 C
ATOM 14 N9 G B 9 -18.033 41.114 -9.546 1.00 36.19 N
ATOM 15 C8 G B 9 -19.224 40.686 -10.081 1.00 37.53 C
ATOM 16 N7 G B 9 -20.156 40.498 -9.188 1.00 38.96 N
ATOM 17 C5 G B 9 -19.545 40.823 -7.985 1.00 36.11 C
ATOM 18 C6 G B 9 -20.061 40.812 -6.668 1.00 36.16 C
ATOM 19 O6 G B 9 -21.200 40.502 -6.291 1.00 38.87 O
ATOM 20 N1 G B 9 -19.107 41.211 -5.736 1.00 36.60 N
ATOM 21 C2 G B 9 -17.818 41.577 -6.038 1.00 35.57 C
ATOM 22 N2 G B 9 -17.043 41.931 -5.003 1.00 33.34 N
ATOM 23 N3 G B 9 -17.321 41.592 -7.269 1.00 36.15 N
ATOM 24 C4 G B 9 -18.238 41.204 -8.188 1.00 34.96 C
ATOM 25 P G B 10 -14.712 37.358 -12.043 1.00 29.76 P
ATOM 26 OP1 G B 10 -13.883 36.941 -13.194 1.00 33.20 O
ATOM 27 OP2 G B 10 -16.048 36.758 -11.833 1.00 29.98 O
ATOM 28 O5' G B 10 -13.842 37.138 -10.720 1.00 28.62 O
TER
ATOM 2 P G A 8 -24.451 41.585 -15.326 1.00 47.77 P
ATOM 3 OP1 G A 8 -24.328 40.593 -16.419 1.00 44.51 O
ATOM 4 OP2 G A 8 -25.120 41.212 -14.059 1.00 44.24 O
ATOM 5 O5' G A 8 -22.992 42.145 -14.992 1.00 42.86 O
ATOM 6 C5' G A 8 -22.241 42.804 -16.003 1.00 38.20 C
ATOM 7 C4' G A 8 -20.939 43.318 -15.423 1.00 36.80 C
ATOM 8 O4' G A 8 -21.214 44.409 -14.508 1.00 37.92 O
ATOM 9 C3' G A 8 -20.185 42.310 -14.569 1.00 38.60 C
ATOM 10 O3' G A 8 -19.430 41.422 -15.378 1.00 36.71 O
ATOM 11 C2' G A 8 -19.294 43.254 -13.774 1.00 35.16 C
ATOM 12 O2' G A 8 -18.249 43.793 -14.556 1.00 31.68 O
ATOM 13 C1' G A 8 -20.301 44.344 -13.428 1.00 37.89 C
ATOM 14 N9 G A 8 -21.030 44.050 -12.200 1.00 32.99 N
ATOM 15 C8 G A 8 -22.338 43.653 -12.070 1.00 38.64 C
ATOM 16 N7 G A 8 -22.700 43.463 -10.830 1.00 40.53 N
ATOM 17 C5 G A 8 -21.559 43.751 -10.092 1.00 36.77 C
ATOM 18 C6 G A 8 -21.338 43.723 -8.693 1.00 40.13 C
ATOM 19 O6 G A 8 -22.136 43.427 -7.792 1.00 40.91 O
ATOM 20 N1 G A 8 -20.031 44.085 -8.372 1.00 36.98 N
ATOM 21 C2 G A 8 -19.064 44.432 -9.287 1.00 37.18 C
ATOM 22 N2 G A 8 -17.859 44.753 -8.796 1.00 34.90 N
ATOM 23 N3 G A 8 -19.259 44.462 -10.596 1.00 37.39 N
ATOM 24 C4 G A 8 -20.524 44.111 -10.924 1.00 36.57 C
ATOM 25 P G A 9 -19.192 39.913 -14.906 1.00 43.18 P
ATOM 26 OP1 G A 9 -18.437 39.240 -15.986 1.00 36.28 O
ATOM 27 OP2 G A 9 -20.485 39.360 -14.438 1.00 37.47 O
ATOM 28 O5' G A 9 -18.220 40.063 -13.643 1.00 34.58 O
TER
ATOM 1 O3' G B 8 -19.430 41.422 -15.378 1.00 36.71 O
ATOM 2 P G B 9 -19.192 39.913 -14.906 1.00 43.18 P
ATOM 3 OP1 G B 9 -18.437 39.240 -15.986 1.00 36.28 O
ATOM 4 OP2 G B 9 -20.485 39.360 -14.438 1.00 37.47 O
ATOM 5 O5' G B 9 -18.220 40.063 -13.643 1.00 34.58 O
ATOM 6 C5' G B 9 -16.939 40.649 -13.808 1.00 32.12 C
ATOM 7 C4' G B 9 -16.267 40.877 -12.466 1.00 35.67 C
ATOM 8 O4' G B 9 -17.110 41.694 -11.618 1.00 33.05 O
ATOM 9 C3' G B 9 -16.019 39.629 -11.633 1.00 34.35 C
ATOM 10 O3' G B 9 -14.860 38.952 -12.117 1.00 30.62 O
ATOM 11 C2' G B 9 -15.783 40.272 -10.269 1.00 34.51 C
ATOM 12 O2' G B 9 -14.480 40.806 -10.153 1.00 35.46 O
ATOM 13 C1' G B 9 -16.798 41.415 -10.266 1.00 34.19 C
ATOM 14 N9 G B 9 -18.033 41.114 -9.546 1.00 36.19 N
ATOM 15 C8 G B 9 -19.224 40.686 -10.081 1.00 37.53 C
ATOM 16 N7 G B 9 -20.156 40.498 -9.188 1.00 38.96 N
ATOM 17 C5 G B 9 -19.545 40.823 -7.985 1.00 36.11 C
ATOM 18 C6 G B 9 -20.061 40.812 -6.668 1.00 36.16 C
ATOM 19 O6 G B 9 -21.200 40.502 -6.291 1.00 38.87 O
ATOM 20 N1 G B 9 -19.107 41.211 -5.736 1.00 36.60 N
ATOM 21 C2 G B 9 -17.818 41.577 -6.038 1.00 35.57 C
ATOM 22 N2 G B 9 -17.043 41.931 -5.003 1.00 33.34 N
ATOM 23 N3 G B 9 -17.321 41.592 -7.269 1.00 36.15 N
ATOM 24 C4 G B 9 -18.238 41.204 -8.188 1.00 34.96 C
ATOM 25 P G B 10 -14.712 37.358 -12.043 1.00 29.76 P
ATOM 26 OP1 G B 10 -13.883 36.941 -13.194 1.00 33.20 O
ATOM 27 OP2 G B 10 -16.048 36.758 -11.833 1.00 29.98 O
ATOM 28 O5' G B 10 -13.842 37.138 -10.720 1.00 28.62 O
TER
Atoms:
OP1: (-24.328,40.593,-16.419)
OP2: (-25.120,41.212,-14.059)
C3': (-20.185,42.310,-14.569)
C1': (-20.301,44.344,-13.428)
C5': (-22.241,42.804,-16.003)
O6: (-22.136,43.427,-7.792)
O4': (-21.214,44.409,-14.508)
C8: (-22.338,43.653,-12.070)
C2: (-19.064,44.432,-9.287)
C6: (-21.338,43.723,-8.693)
C5: (-21.559,43.751,-10.092)
C4: (-20.524,44.111,-10.924)
P: (-24.451,41.585,-15.326)
C4': (-20.939,43.318,-15.423)
C2': (-19.294,43.254,-13.774)
O2': (-18.249,43.793,-14.556)
N1: (-20.031,44.085,-8.372)
N2: (-17.859,44.753,-8.796)
N3: (-19.259,44.462,-10.596)
N7: (-22.700,43.463,-10.830)
N9: (-21.030,44.050,-12.200)
O5': (-22.992,42.145,-14.992)
O3': (-19.430,41.422,-15.378)
OP2: (-25.120,41.212,-14.059)
C3': (-20.185,42.310,-14.569)
C1': (-20.301,44.344,-13.428)
C5': (-22.241,42.804,-16.003)
O6: (-22.136,43.427,-7.792)
O4': (-21.214,44.409,-14.508)
C8: (-22.338,43.653,-12.070)
C2: (-19.064,44.432,-9.287)
C6: (-21.338,43.723,-8.693)
C5: (-21.559,43.751,-10.092)
C4: (-20.524,44.111,-10.924)
P: (-24.451,41.585,-15.326)
C4': (-20.939,43.318,-15.423)
C2': (-19.294,43.254,-13.774)
O2': (-18.249,43.793,-14.556)
N1: (-20.031,44.085,-8.372)
N2: (-17.859,44.753,-8.796)
N3: (-19.259,44.462,-10.596)
N7: (-22.700,43.463,-10.830)
N9: (-21.030,44.050,-12.200)
O5': (-22.992,42.145,-14.992)
O3': (-19.430,41.422,-15.378)
OP1: (-18.437,39.240,-15.986)
OP2: (-20.485,39.360,-14.438)
C3': (-16.019,39.629,-11.633)
C1': (-16.798,41.415,-10.266)
C5': (-16.939,40.649,-13.808)
O6: (-21.200,40.502,-6.291)
O4': (-17.110,41.694,-11.618)
C8: (-19.224,40.686,-10.081)
C2: (-17.818,41.577,-6.038)
C6: (-20.061,40.812,-6.668)
C5: (-19.545,40.823,-7.985)
C4: (-18.238,41.204,-8.188)
P: (-19.192,39.913,-14.906)
C4': (-16.267,40.877,-12.466)
C2': (-15.783,40.272,-10.269)
O2': (-14.480,40.806,-10.153)
N1: (-19.107,41.211,-5.736)
N2: (-17.043,41.931,-5.003)
N3: (-17.321,41.592,-7.269)
N7: (-20.156,40.498,-9.188)
N9: (-18.033,41.114,-9.546)
O5': (-18.220,40.063,-13.643)
O3': (-14.860,38.952,-12.117)
OP2: (-20.485,39.360,-14.438)
C3': (-16.019,39.629,-11.633)
C1': (-16.798,41.415,-10.266)
C5': (-16.939,40.649,-13.808)
O6: (-21.200,40.502,-6.291)
O4': (-17.110,41.694,-11.618)
C8: (-19.224,40.686,-10.081)
C2: (-17.818,41.577,-6.038)
C6: (-20.061,40.812,-6.668)
C5: (-19.545,40.823,-7.985)
C4: (-18.238,41.204,-8.188)
P: (-19.192,39.913,-14.906)
C4': (-16.267,40.877,-12.466)
C2': (-15.783,40.272,-10.269)
O2': (-14.480,40.806,-10.153)
N1: (-19.107,41.211,-5.736)
N2: (-17.043,41.931,-5.003)
N3: (-17.321,41.592,-7.269)
N7: (-20.156,40.498,-9.188)
N9: (-18.033,41.114,-9.546)
O5': (-18.220,40.063,-13.643)
O3': (-14.860,38.952,-12.117)
Image (generated by PyMOL):