Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0107:0119
Extra
PDB:
ATOM 1 O3' G A 106 86.948 150.554 30.609 1.00 43.67 O
ATOM 2 P A A 107 86.870 150.050 32.131 1.00 45.71 P
ATOM 3 OP1 A A 107 87.918 149.003 32.263 1.00 42.89 O
ATOM 4 OP2 A A 107 85.462 149.732 32.467 1.00 47.01 O
ATOM 5 O5' A A 107 87.293 151.316 33.001 1.00 44.77 O
ATOM 6 C5' A A 107 88.677 151.663 33.174 1.00 42.79 C
ATOM 7 C4' A A 107 88.808 152.793 34.161 1.00 41.82 C
ATOM 8 O4' A A 107 88.174 153.982 33.626 1.00 41.34 O
ATOM 9 C3' A A 107 88.087 152.583 35.475 1.00 42.83 C
ATOM 10 O3' A A 107 88.814 151.753 36.360 1.00 44.53 O
ATOM 11 C2' A A 107 87.941 154.008 35.980 1.00 41.31 C
ATOM 12 O2' A A 107 89.158 154.508 36.494 1.00 44.21 O
ATOM 13 C1' A A 107 87.601 154.737 34.683 1.00 38.01 C
ATOM 14 N9 A A 107 86.165 154.823 34.441 1.00 35.64 N
ATOM 15 C8 A A 107 85.389 153.969 33.698 1.00 35.78 C
ATOM 16 N7 A A 107 84.124 154.309 33.650 1.00 34.46 N
ATOM 17 C5 A A 107 84.062 155.465 34.412 1.00 33.56 C
ATOM 18 C6 A A 107 82.996 156.319 34.748 1.00 33.42 C
ATOM 19 N6 A A 107 81.742 156.143 34.326 1.00 32.13 N
ATOM 20 N1 A A 107 83.266 157.375 35.540 1.00 34.59 N
ATOM 21 C2 A A 107 84.528 157.560 35.952 1.00 36.96 C
ATOM 22 N3 A A 107 85.617 156.832 35.695 1.00 36.69 N
ATOM 23 C4 A A 107 85.311 155.788 34.912 1.00 34.37 C
ATOM 24 P G A 108 88.017 150.755 37.331 1.00 46.96 P
ATOM 25 OP1 G A 108 89.042 149.919 38.013 1.00 46.69 O
ATOM 26 OP2 G A 108 86.923 150.105 36.559 1.00 45.21 O
ATOM 27 O5' G A 108 87.381 151.721 38.425 1.00 42.99 O
TER
ATOM 1 O3' C B 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 2 P A B 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 3 OP1 A B 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 4 OP2 A B 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 5 O5' A B 119 87.078 147.287 26.686 1.00 45.01 O
ATOM 6 C5' A B 119 87.516 148.301 27.610 1.00 42.05 C
ATOM 7 C4' A B 119 87.462 147.762 29.015 1.00 40.99 C
ATOM 8 O4' A B 119 86.080 147.637 29.429 1.00 41.40 O
ATOM 9 C3' A B 119 88.027 146.359 29.129 1.00 40.73 C
ATOM 10 O3' A B 119 89.423 146.387 29.315 1.00 42.35 O
ATOM 11 C2' A B 119 87.273 145.777 30.312 1.00 41.00 C
ATOM 12 O2' A B 119 87.783 146.188 31.562 1.00 41.48 O
ATOM 13 C1' A B 119 85.897 146.409 30.117 1.00 41.42 C
ATOM 14 N9 A B 119 84.948 145.595 29.355 1.00 40.35 N
ATOM 15 C8 A B 119 84.377 145.893 28.141 1.00 39.86 C
ATOM 16 N7 A B 119 83.488 145.020 27.747 1.00 40.34 N
ATOM 17 C5 A B 119 83.484 144.069 28.756 1.00 41.12 C
ATOM 18 C6 A B 119 82.735 142.896 28.945 1.00 40.44 C
ATOM 19 N6 A B 119 81.797 142.478 28.097 1.00 38.20 N
ATOM 20 N1 A B 119 82.981 142.165 30.054 1.00 40.79 N
ATOM 21 C2 A B 119 83.915 142.597 30.911 1.00 40.32 C
ATOM 22 N3 A B 119 84.675 143.688 30.850 1.00 40.80 N
ATOM 23 C4 A B 119 84.403 144.394 29.738 1.00 40.90 C
ATOM 24 P A B 120 90.327 145.295 28.589 1.00 44.63 P
ATOM 25 OP1 A B 120 91.737 145.447 29.029 1.00 46.56 O
ATOM 26 OP2 A B 120 89.991 145.331 27.146 1.00 43.97 O
ATOM 27 O5' A B 120 89.790 143.931 29.191 1.00 45.48 O
TER
ATOM 2 P A A 107 86.870 150.050 32.131 1.00 45.71 P
ATOM 3 OP1 A A 107 87.918 149.003 32.263 1.00 42.89 O
ATOM 4 OP2 A A 107 85.462 149.732 32.467 1.00 47.01 O
ATOM 5 O5' A A 107 87.293 151.316 33.001 1.00 44.77 O
ATOM 6 C5' A A 107 88.677 151.663 33.174 1.00 42.79 C
ATOM 7 C4' A A 107 88.808 152.793 34.161 1.00 41.82 C
ATOM 8 O4' A A 107 88.174 153.982 33.626 1.00 41.34 O
ATOM 9 C3' A A 107 88.087 152.583 35.475 1.00 42.83 C
ATOM 10 O3' A A 107 88.814 151.753 36.360 1.00 44.53 O
ATOM 11 C2' A A 107 87.941 154.008 35.980 1.00 41.31 C
ATOM 12 O2' A A 107 89.158 154.508 36.494 1.00 44.21 O
ATOM 13 C1' A A 107 87.601 154.737 34.683 1.00 38.01 C
ATOM 14 N9 A A 107 86.165 154.823 34.441 1.00 35.64 N
ATOM 15 C8 A A 107 85.389 153.969 33.698 1.00 35.78 C
ATOM 16 N7 A A 107 84.124 154.309 33.650 1.00 34.46 N
ATOM 17 C5 A A 107 84.062 155.465 34.412 1.00 33.56 C
ATOM 18 C6 A A 107 82.996 156.319 34.748 1.00 33.42 C
ATOM 19 N6 A A 107 81.742 156.143 34.326 1.00 32.13 N
ATOM 20 N1 A A 107 83.266 157.375 35.540 1.00 34.59 N
ATOM 21 C2 A A 107 84.528 157.560 35.952 1.00 36.96 C
ATOM 22 N3 A A 107 85.617 156.832 35.695 1.00 36.69 N
ATOM 23 C4 A A 107 85.311 155.788 34.912 1.00 34.37 C
ATOM 24 P G A 108 88.017 150.755 37.331 1.00 46.96 P
ATOM 25 OP1 G A 108 89.042 149.919 38.013 1.00 46.69 O
ATOM 26 OP2 G A 108 86.923 150.105 36.559 1.00 45.21 O
ATOM 27 O5' G A 108 87.381 151.721 38.425 1.00 42.99 O
TER
ATOM 1 O3' C B 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 2 P A B 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 3 OP1 A B 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 4 OP2 A B 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 5 O5' A B 119 87.078 147.287 26.686 1.00 45.01 O
ATOM 6 C5' A B 119 87.516 148.301 27.610 1.00 42.05 C
ATOM 7 C4' A B 119 87.462 147.762 29.015 1.00 40.99 C
ATOM 8 O4' A B 119 86.080 147.637 29.429 1.00 41.40 O
ATOM 9 C3' A B 119 88.027 146.359 29.129 1.00 40.73 C
ATOM 10 O3' A B 119 89.423 146.387 29.315 1.00 42.35 O
ATOM 11 C2' A B 119 87.273 145.777 30.312 1.00 41.00 C
ATOM 12 O2' A B 119 87.783 146.188 31.562 1.00 41.48 O
ATOM 13 C1' A B 119 85.897 146.409 30.117 1.00 41.42 C
ATOM 14 N9 A B 119 84.948 145.595 29.355 1.00 40.35 N
ATOM 15 C8 A B 119 84.377 145.893 28.141 1.00 39.86 C
ATOM 16 N7 A B 119 83.488 145.020 27.747 1.00 40.34 N
ATOM 17 C5 A B 119 83.484 144.069 28.756 1.00 41.12 C
ATOM 18 C6 A B 119 82.735 142.896 28.945 1.00 40.44 C
ATOM 19 N6 A B 119 81.797 142.478 28.097 1.00 38.20 N
ATOM 20 N1 A B 119 82.981 142.165 30.054 1.00 40.79 N
ATOM 21 C2 A B 119 83.915 142.597 30.911 1.00 40.32 C
ATOM 22 N3 A B 119 84.675 143.688 30.850 1.00 40.80 N
ATOM 23 C4 A B 119 84.403 144.394 29.738 1.00 40.90 C
ATOM 24 P A B 120 90.327 145.295 28.589 1.00 44.63 P
ATOM 25 OP1 A B 120 91.737 145.447 29.029 1.00 46.56 O
ATOM 26 OP2 A B 120 89.991 145.331 27.146 1.00 43.97 O
ATOM 27 O5' A B 120 89.790 143.931 29.191 1.00 45.48 O
TER
Atoms:
OP1: (87.918,149.003,32.263)
OP2: (85.462,149.732,32.467)
C3': (88.087,152.583,35.475)
C1': (87.601,154.737,34.683)
C5': (88.677,151.663,33.174)
O4': (88.174,153.982,33.626)
C8: (85.389,153.969,33.698)
O2': (89.158,154.508,36.494)
C6: (82.996,156.319,34.748)
C5: (84.062,155.465,34.412)
C4: (85.311,155.788,34.912)
P: (86.870,150.050,32.131)
C4': (88.808,152.793,34.161)
C2': (87.941,154.008,35.980)
C2: (84.528,157.560,35.952)
N1: (83.266,157.375,35.540)
N3: (85.617,156.832,35.695)
N6: (81.742,156.143,34.326)
N7: (84.124,154.309,33.650)
N9: (86.165,154.823,34.441)
O5': (87.293,151.316,33.001)
O3': (88.814,151.753,36.360)
OP2: (85.462,149.732,32.467)
C3': (88.087,152.583,35.475)
C1': (87.601,154.737,34.683)
C5': (88.677,151.663,33.174)
O4': (88.174,153.982,33.626)
C8: (85.389,153.969,33.698)
O2': (89.158,154.508,36.494)
C6: (82.996,156.319,34.748)
C5: (84.062,155.465,34.412)
C4: (85.311,155.788,34.912)
P: (86.870,150.050,32.131)
C4': (88.808,152.793,34.161)
C2': (87.941,154.008,35.980)
C2: (84.528,157.560,35.952)
N1: (83.266,157.375,35.540)
N3: (85.617,156.832,35.695)
N6: (81.742,156.143,34.326)
N7: (84.124,154.309,33.650)
N9: (86.165,154.823,34.441)
O5': (87.293,151.316,33.001)
O3': (88.814,151.753,36.360)
OP1: (86.686,149.106,25.029)
OP2: (87.211,146.727,24.269)
C3': (88.027,146.359,29.129)
C1': (85.897,146.409,30.117)
C5': (87.516,148.301,27.610)
O4': (86.080,147.637,29.429)
C8: (84.377,145.893,28.141)
O2': (87.783,146.188,31.562)
C6: (82.735,142.896,28.945)
C5: (83.484,144.069,28.756)
C4: (84.403,144.394,29.738)
P: (86.560,147.653,25.226)
C4': (87.462,147.762,29.015)
C2': (87.273,145.777,30.312)
C2: (83.915,142.597,30.911)
N1: (82.981,142.165,30.054)
N3: (84.675,143.688,30.850)
N6: (81.797,142.478,28.097)
N7: (83.488,145.020,27.747)
N9: (84.948,145.595,29.355)
O5': (87.078,147.287,26.686)
O3': (89.423,146.387,29.315)
OP2: (87.211,146.727,24.269)
C3': (88.027,146.359,29.129)
C1': (85.897,146.409,30.117)
C5': (87.516,148.301,27.610)
O4': (86.080,147.637,29.429)
C8: (84.377,145.893,28.141)
O2': (87.783,146.188,31.562)
C6: (82.735,142.896,28.945)
C5: (83.484,144.069,28.756)
C4: (84.403,144.394,29.738)
P: (86.560,147.653,25.226)
C4': (87.462,147.762,29.015)
C2': (87.273,145.777,30.312)
C2: (83.915,142.597,30.911)
N1: (82.981,142.165,30.054)
N3: (84.675,143.688,30.850)
N6: (81.797,142.478,28.097)
N7: (83.488,145.020,27.747)
N9: (84.948,145.595,29.355)
O5': (87.078,147.287,26.686)
O3': (89.423,146.387,29.315)
Image (generated by PyMOL):