Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0107:0119
Extra
PDB:
ATOM 1 O3' G A 106 87.457 150.776 30.864 1.00 58.86 O
ATOM 2 P A A 107 87.281 150.195 32.343 1.00 59.11 P
ATOM 3 OP1 A A 107 88.266 149.098 32.492 1.00 58.44 O
ATOM 4 OP2 A A 107 85.838 149.930 32.574 1.00 60.37 O
ATOM 5 O5' A A 107 87.706 151.405 33.282 1.00 57.73 O
ATOM 6 C5' A A 107 89.071 151.822 33.371 1.00 56.18 C
ATOM 7 C4' A A 107 89.191 152.963 34.341 1.00 55.31 C
ATOM 8 O4' A A 107 88.527 154.138 33.809 1.00 53.07 O
ATOM 9 C3' A A 107 88.476 152.743 35.657 1.00 56.59 C
ATOM 10 O3' A A 107 89.199 151.890 36.531 1.00 61.02 O
ATOM 11 C2' A A 107 88.323 154.165 36.171 1.00 54.20 C
ATOM 12 O2' A A 107 89.530 154.680 36.695 1.00 53.11 O
ATOM 13 C1' A A 107 87.979 154.898 34.877 1.00 52.03 C
ATOM 14 N9 A A 107 86.537 155.028 34.668 1.00 50.14 N
ATOM 15 C8 A A 107 85.703 154.258 33.888 1.00 49.90 C
ATOM 16 N7 A A 107 84.451 154.655 33.899 1.00 47.81 N
ATOM 17 C5 A A 107 84.460 155.756 34.745 1.00 47.77 C
ATOM 18 C6 A A 107 83.444 156.637 35.167 1.00 46.71 C
ATOM 19 N6 A A 107 82.176 156.558 34.759 1.00 46.69 N
ATOM 20 N1 A A 107 83.783 157.621 36.028 1.00 46.88 N
ATOM 21 C2 A A 107 85.062 157.717 36.419 1.00 48.85 C
ATOM 22 N3 A A 107 86.110 156.962 36.081 1.00 48.90 N
ATOM 23 C4 A A 107 85.736 155.989 35.234 1.00 48.67 C
ATOM 24 P G A 108 88.391 150.866 37.473 1.00 62.17 P
ATOM 25 OP1 G A 108 89.409 149.987 38.125 1.00 61.18 O
ATOM 26 OP2 G A 108 87.288 150.259 36.678 1.00 61.58 O
ATOM 27 O5' G A 108 87.757 151.799 38.596 1.00 57.46 O
TER
ATOM 1 O3' C B 118 85.355 147.677 25.509 1.00 60.69 O
ATOM 2 P A B 119 86.956 147.710 25.466 1.00 57.87 P
ATOM 3 OP1 A B 119 87.321 149.100 25.107 1.00 59.04 O
ATOM 4 OP2 A B 119 87.454 146.593 24.639 1.00 58.09 O
ATOM 5 O5' A B 119 87.384 147.390 26.963 1.00 56.93 O
ATOM 6 C5' A B 119 87.824 148.418 27.869 1.00 56.06 C
ATOM 7 C4' A B 119 87.847 147.868 29.273 1.00 55.91 C
ATOM 8 O4' A B 119 86.497 147.777 29.792 1.00 56.63 O
ATOM 9 C3' A B 119 88.404 146.459 29.338 1.00 54.87 C
ATOM 10 O3' A B 119 89.804 146.497 29.508 1.00 56.65 O
ATOM 11 C2' A B 119 87.674 145.845 30.520 1.00 54.53 C
ATOM 12 O2' A B 119 88.270 146.212 31.749 1.00 53.24 O
ATOM 13 C1' A B 119 86.297 146.508 30.397 1.00 55.34 C
ATOM 14 N9 A B 119 85.291 145.792 29.602 1.00 53.86 N
ATOM 15 C8 A B 119 84.738 146.226 28.422 1.00 53.55 C
ATOM 16 N7 A B 119 83.822 145.428 27.941 1.00 52.76 N
ATOM 17 C5 A B 119 83.769 144.391 28.854 1.00 52.68 C
ATOM 18 C6 A B 119 82.979 143.237 28.915 1.00 52.17 C
ATOM 19 N6 A B 119 82.049 142.930 28.007 1.00 50.86 N
ATOM 20 N1 A B 119 83.172 142.401 29.955 1.00 51.74 N
ATOM 21 C2 A B 119 84.096 142.720 30.868 1.00 51.75 C
ATOM 22 N3 A B 119 84.896 143.779 30.923 1.00 52.71 N
ATOM 23 C4 A B 119 84.680 144.590 29.877 1.00 53.05 C
ATOM 24 P A B 120 90.717 145.443 28.734 1.00 58.72 P
ATOM 25 OP1 A B 120 92.130 145.587 29.185 1.00 60.05 O
ATOM 26 OP2 A B 120 90.379 145.534 27.287 1.00 57.63 O
ATOM 27 O5' A B 120 90.224 144.050 29.306 1.00 59.46 O
TER
ATOM 2 P A A 107 87.281 150.195 32.343 1.00 59.11 P
ATOM 3 OP1 A A 107 88.266 149.098 32.492 1.00 58.44 O
ATOM 4 OP2 A A 107 85.838 149.930 32.574 1.00 60.37 O
ATOM 5 O5' A A 107 87.706 151.405 33.282 1.00 57.73 O
ATOM 6 C5' A A 107 89.071 151.822 33.371 1.00 56.18 C
ATOM 7 C4' A A 107 89.191 152.963 34.341 1.00 55.31 C
ATOM 8 O4' A A 107 88.527 154.138 33.809 1.00 53.07 O
ATOM 9 C3' A A 107 88.476 152.743 35.657 1.00 56.59 C
ATOM 10 O3' A A 107 89.199 151.890 36.531 1.00 61.02 O
ATOM 11 C2' A A 107 88.323 154.165 36.171 1.00 54.20 C
ATOM 12 O2' A A 107 89.530 154.680 36.695 1.00 53.11 O
ATOM 13 C1' A A 107 87.979 154.898 34.877 1.00 52.03 C
ATOM 14 N9 A A 107 86.537 155.028 34.668 1.00 50.14 N
ATOM 15 C8 A A 107 85.703 154.258 33.888 1.00 49.90 C
ATOM 16 N7 A A 107 84.451 154.655 33.899 1.00 47.81 N
ATOM 17 C5 A A 107 84.460 155.756 34.745 1.00 47.77 C
ATOM 18 C6 A A 107 83.444 156.637 35.167 1.00 46.71 C
ATOM 19 N6 A A 107 82.176 156.558 34.759 1.00 46.69 N
ATOM 20 N1 A A 107 83.783 157.621 36.028 1.00 46.88 N
ATOM 21 C2 A A 107 85.062 157.717 36.419 1.00 48.85 C
ATOM 22 N3 A A 107 86.110 156.962 36.081 1.00 48.90 N
ATOM 23 C4 A A 107 85.736 155.989 35.234 1.00 48.67 C
ATOM 24 P G A 108 88.391 150.866 37.473 1.00 62.17 P
ATOM 25 OP1 G A 108 89.409 149.987 38.125 1.00 61.18 O
ATOM 26 OP2 G A 108 87.288 150.259 36.678 1.00 61.58 O
ATOM 27 O5' G A 108 87.757 151.799 38.596 1.00 57.46 O
TER
ATOM 1 O3' C B 118 85.355 147.677 25.509 1.00 60.69 O
ATOM 2 P A B 119 86.956 147.710 25.466 1.00 57.87 P
ATOM 3 OP1 A B 119 87.321 149.100 25.107 1.00 59.04 O
ATOM 4 OP2 A B 119 87.454 146.593 24.639 1.00 58.09 O
ATOM 5 O5' A B 119 87.384 147.390 26.963 1.00 56.93 O
ATOM 6 C5' A B 119 87.824 148.418 27.869 1.00 56.06 C
ATOM 7 C4' A B 119 87.847 147.868 29.273 1.00 55.91 C
ATOM 8 O4' A B 119 86.497 147.777 29.792 1.00 56.63 O
ATOM 9 C3' A B 119 88.404 146.459 29.338 1.00 54.87 C
ATOM 10 O3' A B 119 89.804 146.497 29.508 1.00 56.65 O
ATOM 11 C2' A B 119 87.674 145.845 30.520 1.00 54.53 C
ATOM 12 O2' A B 119 88.270 146.212 31.749 1.00 53.24 O
ATOM 13 C1' A B 119 86.297 146.508 30.397 1.00 55.34 C
ATOM 14 N9 A B 119 85.291 145.792 29.602 1.00 53.86 N
ATOM 15 C8 A B 119 84.738 146.226 28.422 1.00 53.55 C
ATOM 16 N7 A B 119 83.822 145.428 27.941 1.00 52.76 N
ATOM 17 C5 A B 119 83.769 144.391 28.854 1.00 52.68 C
ATOM 18 C6 A B 119 82.979 143.237 28.915 1.00 52.17 C
ATOM 19 N6 A B 119 82.049 142.930 28.007 1.00 50.86 N
ATOM 20 N1 A B 119 83.172 142.401 29.955 1.00 51.74 N
ATOM 21 C2 A B 119 84.096 142.720 30.868 1.00 51.75 C
ATOM 22 N3 A B 119 84.896 143.779 30.923 1.00 52.71 N
ATOM 23 C4 A B 119 84.680 144.590 29.877 1.00 53.05 C
ATOM 24 P A B 120 90.717 145.443 28.734 1.00 58.72 P
ATOM 25 OP1 A B 120 92.130 145.587 29.185 1.00 60.05 O
ATOM 26 OP2 A B 120 90.379 145.534 27.287 1.00 57.63 O
ATOM 27 O5' A B 120 90.224 144.050 29.306 1.00 59.46 O
TER
Atoms:
OP1: (88.266,149.098,32.492)
OP2: (85.838,149.930,32.574)
C3': (88.476,152.743,35.657)
C1': (87.979,154.898,34.877)
C5': (89.071,151.822,33.371)
O4': (88.527,154.138,33.809)
C8: (85.703,154.258,33.888)
O2': (89.530,154.680,36.695)
C6: (83.444,156.637,35.167)
C5: (84.460,155.756,34.745)
C4: (85.736,155.989,35.234)
P: (87.281,150.195,32.343)
C4': (89.191,152.963,34.341)
C2': (88.323,154.165,36.171)
C2: (85.062,157.717,36.419)
N1: (83.783,157.621,36.028)
N3: (86.110,156.962,36.081)
N6: (82.176,156.558,34.759)
N7: (84.451,154.655,33.899)
N9: (86.537,155.028,34.668)
O5': (87.706,151.405,33.282)
O3': (89.199,151.890,36.531)
OP2: (85.838,149.930,32.574)
C3': (88.476,152.743,35.657)
C1': (87.979,154.898,34.877)
C5': (89.071,151.822,33.371)
O4': (88.527,154.138,33.809)
C8: (85.703,154.258,33.888)
O2': (89.530,154.680,36.695)
C6: (83.444,156.637,35.167)
C5: (84.460,155.756,34.745)
C4: (85.736,155.989,35.234)
P: (87.281,150.195,32.343)
C4': (89.191,152.963,34.341)
C2': (88.323,154.165,36.171)
C2: (85.062,157.717,36.419)
N1: (83.783,157.621,36.028)
N3: (86.110,156.962,36.081)
N6: (82.176,156.558,34.759)
N7: (84.451,154.655,33.899)
N9: (86.537,155.028,34.668)
O5': (87.706,151.405,33.282)
O3': (89.199,151.890,36.531)
OP1: (87.321,149.100,25.107)
OP2: (87.454,146.593,24.639)
C3': (88.404,146.459,29.338)
C1': (86.297,146.508,30.397)
C5': (87.824,148.418,27.869)
O4': (86.497,147.777,29.792)
C8: (84.738,146.226,28.422)
O2': (88.270,146.212,31.749)
C6: (82.979,143.237,28.915)
C5: (83.769,144.391,28.854)
C4: (84.680,144.590,29.877)
P: (86.956,147.710,25.466)
C4': (87.847,147.868,29.273)
C2': (87.674,145.845,30.520)
C2: (84.096,142.720,30.868)
N1: (83.172,142.401,29.955)
N3: (84.896,143.779,30.923)
N6: (82.049,142.930,28.007)
N7: (83.822,145.428,27.941)
N9: (85.291,145.792,29.602)
O5': (87.384,147.390,26.963)
O3': (89.804,146.497,29.508)
OP2: (87.454,146.593,24.639)
C3': (88.404,146.459,29.338)
C1': (86.297,146.508,30.397)
C5': (87.824,148.418,27.869)
O4': (86.497,147.777,29.792)
C8: (84.738,146.226,28.422)
O2': (88.270,146.212,31.749)
C6: (82.979,143.237,28.915)
C5: (83.769,144.391,28.854)
C4: (84.680,144.590,29.877)
P: (86.956,147.710,25.466)
C4': (87.847,147.868,29.273)
C2': (87.674,145.845,30.520)
C2: (84.096,142.720,30.868)
N1: (83.172,142.401,29.955)
N3: (84.896,143.779,30.923)
N6: (82.049,142.930,28.007)
N7: (83.822,145.428,27.941)
N9: (85.291,145.792,29.602)
O5': (87.384,147.390,26.963)
O3': (89.804,146.497,29.508)
Image (generated by PyMOL):