ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0107:0119

Extra

PDB:
ATOM 1 O3' G A 106 87.183 150.607 30.559 1.00 46.01 O
ATOM 2 P A A 107 86.907 149.942 31.987 1.00 47.49 P
ATOM 3 OP1 A A 107 87.810 148.776 32.100 1.00 46.62 O
ATOM 4 OP2 A A 107 85.447 149.759 32.118 1.00 49.16 O
ATOM 5 O5' A A 107 87.340 151.053 33.042 1.00 46.47 O
ATOM 6 C5' A A 107 88.701 151.493 33.136 1.00 44.22 C
ATOM 7 C4' A A 107 88.803 152.679 34.062 1.00 43.03 C
ATOM 8 O4' A A 107 88.149 153.835 33.483 1.00 42.61 O
ATOM 9 C3' A A 107 88.097 152.525 35.389 1.00 44.23 C
ATOM 10 O3' A A 107 88.848 151.745 36.289 1.00 47.55 O
ATOM 11 C2' A A 107 87.955 153.968 35.841 1.00 43.22 C
ATOM 12 O2' A A 107 89.164 154.495 36.357 1.00 43.98 O
ATOM 13 C1' A A 107 87.614 154.648 34.517 1.00 40.72 C
ATOM 14 N9 A A 107 86.173 154.750 34.316 1.00 38.25 N
ATOM 15 C8 A A 107 85.352 153.906 33.609 1.00 39.50 C
ATOM 16 N7 A A 107 84.090 154.264 33.617 1.00 38.69 N
ATOM 17 C5 A A 107 84.081 155.425 34.377 1.00 38.17 C
ATOM 18 C6 A A 107 83.046 156.296 34.759 1.00 37.92 C
ATOM 19 N6 A A 107 81.769 156.130 34.405 1.00 39.16 N
ATOM 20 N1 A A 107 83.372 157.356 35.528 1.00 37.64 N
ATOM 21 C2 A A 107 84.655 157.522 35.879 1.00 38.73 C
ATOM 22 N3 A A 107 85.718 156.777 35.577 1.00 37.53 N
ATOM 23 C4 A A 107 85.358 155.733 34.816 1.00 37.71 C
ATOM 24 P G A 108 88.093 150.694 37.226 1.00 49.30 P
ATOM 25 OP1 G A 108 89.146 149.841 37.848 1.00 48.37 O
ATOM 26 OP2 G A 108 87.016 150.070 36.409 1.00 49.58 O
ATOM 27 O5' G A 108 87.445 151.596 38.368 1.00 46.55 O
TER

ATOM 1 O3' C B 118 85.044 147.303 25.167 1.00 53.93 O
ATOM 2 P A B 119 86.614 147.606 25.103 1.00 49.74 P
ATOM 3 OP1 A B 119 86.751 149.053 24.880 1.00 50.24 O
ATOM 4 OP2 A B 119 87.257 146.662 24.171 1.00 50.31 O
ATOM 5 O5' A B 119 87.132 147.249 26.561 1.00 48.57 O
ATOM 6 C5' A B 119 87.518 148.269 27.497 1.00 46.92 C
ATOM 7 C4' A B 119 87.445 147.719 28.894 1.00 45.64 C
ATOM 8 O4' A B 119 86.061 147.596 29.284 1.00 45.03 O
ATOM 9 C3' A B 119 87.999 146.312 28.997 1.00 44.48 C
ATOM 10 O3' A B 119 89.386 146.336 29.213 1.00 46.01 O
ATOM 11 C2' A B 119 87.232 145.718 30.160 1.00 43.61 C
ATOM 12 O2' A B 119 87.760 146.113 31.404 1.00 43.91 O
ATOM 13 C1' A B 119 85.865 146.369 29.966 1.00 43.76 C
ATOM 14 N9 A B 119 84.896 145.582 29.207 1.00 41.78 N
ATOM 15 C8 A B 119 84.292 145.922 28.027 1.00 41.26 C
ATOM 16 N7 A B 119 83.391 145.066 27.631 1.00 42.48 N
ATOM 17 C5 A B 119 83.419 144.077 28.601 1.00 43.60 C
ATOM 18 C6 A B 119 82.687 142.887 28.761 1.00 43.74 C
ATOM 19 N6 A B 119 81.747 142.480 27.912 1.00 43.39 N
ATOM 20 N1 A B 119 82.961 142.121 29.838 1.00 43.55 N
ATOM 21 C2 A B 119 83.913 142.529 30.686 1.00 44.63 C
ATOM 22 N3 A B 119 84.668 143.627 30.644 1.00 44.58 N
ATOM 23 C4 A B 119 84.362 144.371 29.566 1.00 43.56 C
ATOM 24 P A B 120 90.305 145.288 28.453 1.00 47.84 P
ATOM 25 OP1 A B 120 91.707 145.523 28.857 1.00 49.85 O
ATOM 26 OP2 A B 120 89.926 145.314 27.018 1.00 48.25 O
ATOM 27 O5' A B 120 89.857 143.904 29.079 1.00 50.45 O
TER

Atoms:
OP1: (87.810,148.776,32.100)
OP2: (85.447,149.759,32.118)
C3': (88.097,152.525,35.389)
C1': (87.614,154.648,34.517)
C5': (88.701,151.493,33.136)
O4': (88.149,153.835,33.483)
C8: (85.352,153.906,33.609)
O2': (89.164,154.495,36.357)
C6: (83.046,156.296,34.759)
C5: (84.081,155.425,34.377)
C4: (85.358,155.733,34.816)
P: (86.907,149.942,31.987)
C4': (88.803,152.679,34.062)
C2': (87.955,153.968,35.841)
C2: (84.655,157.522,35.879)
N1: (83.372,157.356,35.528)
N3: (85.718,156.777,35.577)
N6: (81.769,156.130,34.405)
N7: (84.090,154.264,33.617)
N9: (86.173,154.750,34.316)
O5': (87.340,151.053,33.042)
O3': (88.848,151.745,36.289)
OP1: (86.751,149.053,24.880)
OP2: (87.257,146.662,24.171)
C3': (87.999,146.312,28.997)
C1': (85.865,146.369,29.966)
C5': (87.518,148.269,27.497)
O4': (86.061,147.596,29.284)
C8: (84.292,145.922,28.027)
O2': (87.760,146.113,31.404)
C6: (82.687,142.887,28.761)
C5: (83.419,144.077,28.601)
C4: (84.362,144.371,29.566)
P: (86.614,147.606,25.103)
C4': (87.445,147.719,28.894)
C2': (87.232,145.718,30.160)
C2: (83.913,142.529,30.686)
N1: (82.961,142.121,29.838)
N3: (84.668,143.627,30.644)
N6: (81.747,142.480,27.912)
N7: (83.391,145.066,27.631)
N9: (84.896,145.582,29.207)
O5': (87.132,147.249,26.561)
O3': (89.386,146.336,29.213)
Image (generated by PyMOL):
PyMOL image
show in jmol