ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:02104:02079

Extra

PDB:
ATOM 1 O3' G A2103 120.954 110.390 40.339 1.00 52.99 O
ATOM 2 P A A2104 121.779 109.048 39.991 1.00 53.42 P
ATOM 3 OP1 A A2104 121.345 107.998 40.963 1.00 51.39 O
ATOM 4 OP2 A A2104 123.231 109.379 39.869 1.00 52.84 O
ATOM 5 O5' A A2104 121.232 108.642 38.552 1.00 52.81 O
ATOM 6 C5' A A2104 120.321 107.541 38.391 1.00 54.39 C
ATOM 7 C4' A A2104 118.893 108.033 38.446 1.00 54.69 C
ATOM 8 O4' A A2104 118.756 109.198 37.589 1.00 55.47 O
ATOM 9 C3' A A2104 117.841 107.040 37.964 1.00 54.87 C
ATOM 10 O3' A A2104 116.602 107.375 38.592 1.00 57.14 O
ATOM 11 C2' A A2104 117.745 107.402 36.487 1.00 54.10 C
ATOM 12 O2' A A2104 116.541 106.999 35.878 1.00 55.90 O
ATOM 13 C1' A A2104 117.822 108.925 36.566 1.00 54.26 C
ATOM 14 N9 A A2104 118.281 109.565 35.338 1.00 53.67 N
ATOM 15 C8 A A2104 119.554 109.960 35.012 1.00 52.93 C
ATOM 16 N7 A A2104 119.654 110.488 33.817 1.00 54.60 N
ATOM 17 C5 A A2104 118.357 110.442 33.322 1.00 53.97 C
ATOM 18 C6 A A2104 117.798 110.837 32.096 1.00 54.02 C
ATOM 19 N6 A A2104 118.510 111.362 31.091 1.00 54.92 N
ATOM 20 N1 A A2104 116.468 110.662 31.927 1.00 53.82 N
ATOM 21 C2 A A2104 115.762 110.113 32.923 1.00 52.90 C
ATOM 22 N3 A A2104 116.175 109.690 34.114 1.00 53.16 N
ATOM 23 C4 A A2104 117.499 109.885 34.253 1.00 54.33 C
ATOM 24 P C A2105 115.827 106.304 39.512 1.00 57.28 P
ATOM 25 OP1 C A2105 116.576 105.009 39.520 1.00 56.22 O
ATOM 26 OP2 C A2105 114.403 106.324 39.070 1.00 56.33 O
ATOM 27 O5' C A2105 115.886 106.970 40.964 1.00 54.41 O
TER

ATOM 1 O3' C B2078 108.835 110.150 31.902 1.00 52.27 O
ATOM 2 P U B2079 110.264 110.206 31.163 1.00 56.25 P
ATOM 3 OP1 U B2079 111.215 110.953 32.030 1.00 57.34 O
ATOM 4 OP2 U B2079 110.047 110.649 29.759 1.00 56.37 O
ATOM 5 O5' U B2079 110.781 108.703 31.132 1.00 53.19 O
ATOM 6 C5' U B2079 111.990 108.381 30.436 1.00 52.47 C
ATOM 7 C4' U B2079 112.804 107.383 31.220 1.00 52.04 C
ATOM 8 O4' U B2079 113.300 108.005 32.437 1.00 50.51 O
ATOM 9 C3' U B2079 112.086 106.103 31.653 1.00 52.49 C
ATOM 10 O3' U B2079 113.008 105.017 31.580 1.00 55.45 O
ATOM 11 C2' U B2079 111.777 106.384 33.124 1.00 51.18 C
ATOM 12 O2' U B2079 111.667 105.212 33.915 1.00 52.22 O
ATOM 13 C1' U B2079 113.027 107.158 33.527 1.00 49.82 C
ATOM 14 N1 U B2079 112.950 107.959 34.758 1.00 48.00 N
ATOM 15 C2 U B2079 113.541 107.431 35.892 1.00 46.91 C
ATOM 16 O2 U B2079 114.045 106.317 35.925 1.00 47.85 O
ATOM 17 N3 U B2079 113.515 108.248 36.992 1.00 45.75 N
ATOM 18 C4 U B2079 112.955 109.499 37.084 1.00 46.25 C
ATOM 19 O4 U B2079 113.113 110.149 38.117 1.00 48.04 O
ATOM 20 C5 U B2079 112.319 109.960 35.888 1.00 46.38 C
ATOM 21 C6 U B2079 112.339 109.195 34.791 1.00 47.87 C
ATOM 22 P G B2080 113.354 104.343 30.155 1.00 58.60 P
ATOM 23 OP1 G B2080 112.259 104.657 29.179 1.00 53.59 O
ATOM 24 OP2 G B2080 113.711 102.925 30.428 1.00 57.23 O
ATOM 25 O5' G B2080 114.698 105.088 29.706 1.00 58.62 O
TER

Atoms:
OP1: (121.345,107.998,40.963)
OP2: (123.231,109.379,39.869)
C3': (117.841,107.040,37.964)
C1': (117.822,108.925,36.566)
C5': (120.321,107.541,38.391)
O4': (118.756,109.198,37.589)
C8: (119.554,109.960,35.012)
O2': (116.541,106.999,35.878)
C6: (117.798,110.837,32.096)
C5: (118.357,110.442,33.322)
C4: (117.499,109.885,34.253)
P: (121.779,109.048,39.991)
C4': (118.893,108.033,38.446)
C2': (117.745,107.402,36.487)
C2: (115.762,110.113,32.923)
N1: (116.468,110.662,31.927)
N3: (116.175,109.690,34.114)
N6: (118.510,111.362,31.091)
N7: (119.654,110.488,33.817)
N9: (118.281,109.565,35.338)
O5': (121.232,108.642,38.552)
O3': (116.602,107.375,38.592)
C4: (112.955,109.499,37.084)
N3: (113.515,108.248,36.992)
OP1: (111.215,110.953,32.030)
OP2: (110.047,110.649,29.759)
C2: (113.541,107.431,35.892)
C1': (113.027,107.158,33.527)
C3': (112.086,106.103,31.653)
O5': (110.781,108.703,31.132)
O4': (113.300,108.005,32.437)
C5': (111.990,108.381,30.436)
P: (110.264,110.206,31.163)
C4': (112.804,107.383,31.220)
C2': (111.777,106.384,33.124)
O2': (111.667,105.212,33.915)
N1: (112.950,107.959,34.758)
O4: (113.113,110.149,38.117)
O2: (114.045,106.317,35.925)
C6: (112.339,109.195,34.791)
C5: (112.319,109.960,35.888)
O3': (113.008,105.017,31.580)
Image (generated by PyMOL):
PyMOL image
show in jmol