Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A1363:A1469
Extra
PDB:
ATOM 1 O3' U A1362 183.779 121.594 -26.822 1.00 65.92 O
ATOM 2 P G A1363 182.784 120.623 -26.003 1.00 47.19 P
ATOM 3 OP1 G A1363 181.587 120.455 -26.861 1.00 44.46 O
ATOM 4 OP2 G A1363 182.624 121.090 -24.606 1.00 44.46 O
ATOM 5 O5' G A1363 183.556 119.237 -25.911 1.00 47.19 O
ATOM 6 C5' G A1363 183.934 118.508 -27.098 1.00 47.19 C
ATOM 7 C4' G A1363 184.814 117.337 -26.724 1.00 47.19 C
ATOM 8 O4' G A1363 186.136 117.803 -26.369 1.00 47.19 O
ATOM 9 C3' G A1363 184.331 116.597 -25.492 1.00 47.19 C
ATOM 10 O3' G A1363 183.386 115.606 -25.803 1.00 47.19 O
ATOM 11 C2' G A1363 185.597 115.993 -24.919 1.00 47.19 C
ATOM 12 O2' G A1363 185.906 114.773 -25.536 1.00 47.19 O
ATOM 13 C1' G A1363 186.630 117.059 -25.270 1.00 47.19 C
ATOM 14 N9 G A1363 186.823 117.982 -24.165 1.00 44.46 N
ATOM 15 C8 G A1363 186.157 119.161 -23.964 1.00 44.46 C
ATOM 16 N7 G A1363 186.527 119.777 -22.880 1.00 44.46 N
ATOM 17 C5 G A1363 187.500 118.955 -22.337 1.00 44.46 C
ATOM 18 C6 G A1363 188.262 119.106 -21.159 1.00 44.46 C
ATOM 19 O6 G A1363 188.227 120.027 -20.334 1.00 44.46 O
ATOM 20 N1 G A1363 189.133 118.037 -20.976 1.00 44.46 N
ATOM 21 C2 G A1363 189.244 116.960 -21.820 1.00 44.46 C
ATOM 22 N2 G A1363 190.116 116.020 -21.459 1.00 44.46 N
ATOM 23 N3 G A1363 188.541 116.817 -22.930 1.00 44.46 N
ATOM 24 C4 G A1363 187.692 117.843 -23.121 1.00 44.46 C
ATOM 25 P U A1364 182.346 115.153 -24.683 1.00 43.96 P
ATOM 26 OP1 U A1364 181.417 114.191 -25.364 1.00 56.86 O
ATOM 27 OP2 U A1364 181.805 116.387 -24.041 1.00 56.86 O
ATOM 28 O5' U A1364 183.250 114.386 -23.623 1.00 43.96 O
TER
ATOM 1 O3' A B1468 190.699 114.488 -26.863 1.00 45.02 O
ATOM 2 P A B1469 189.751 115.219 -27.940 1.00 48.37 P
ATOM 3 OP1 A B1469 190.059 116.665 -27.974 1.00 61.75 O
ATOM 4 OP2 A B1469 188.345 114.779 -27.766 1.00 61.75 O
ATOM 5 O5' A B1469 190.289 114.656 -29.322 1.00 48.37 O
ATOM 6 C5' A B1469 189.858 113.384 -29.825 1.00 48.37 C
ATOM 7 C4' A B1469 191.007 112.691 -30.497 1.00 48.37 C
ATOM 8 O4' A B1469 191.533 113.568 -31.528 1.00 48.37 O
ATOM 9 C3' A B1469 192.165 112.371 -29.570 1.00 48.37 C
ATOM 10 O3' A B1469 192.436 110.981 -29.328 1.00 48.37 O
ATOM 11 C2' A B1469 193.259 113.378 -29.905 1.00 48.37 C
ATOM 12 O2' A B1469 194.581 112.892 -29.805 1.00 48.37 O
ATOM 13 C1' A B1469 192.912 113.802 -31.327 1.00 48.37 C
ATOM 14 N9 A B1469 193.141 115.238 -31.492 1.00 61.75 N
ATOM 15 C8 A B1469 192.611 116.255 -30.736 1.00 61.75 C
ATOM 16 N7 A B1469 193.007 117.448 -31.101 1.00 61.75 N
ATOM 17 C5 A B1469 193.851 117.203 -32.172 1.00 61.75 C
ATOM 18 C6 A B1469 194.597 118.058 -33.001 1.00 61.75 C
ATOM 19 N6 A B1469 194.622 119.388 -32.870 1.00 61.75 N
ATOM 20 N1 A B1469 195.332 117.495 -33.980 1.00 61.75 N
ATOM 21 C2 A B1469 195.317 116.165 -34.104 1.00 61.75 C
ATOM 22 N3 A B1469 194.664 115.258 -33.386 1.00 61.75 N
ATOM 23 C4 A B1469 193.939 115.848 -32.426 1.00 61.75 C
ATOM 24 P G B1470 192.575 109.940 -30.540 1.00 41.98 P
ATOM 25 OP1 G B1470 192.844 110.689 -31.792 1.00 43.50 O
ATOM 26 OP2 G B1470 191.458 108.976 -30.489 1.00 43.50 O
ATOM 27 O5' G B1470 193.851 109.112 -30.105 1.00 41.98 O
TER
ATOM 2 P G A1363 182.784 120.623 -26.003 1.00 47.19 P
ATOM 3 OP1 G A1363 181.587 120.455 -26.861 1.00 44.46 O
ATOM 4 OP2 G A1363 182.624 121.090 -24.606 1.00 44.46 O
ATOM 5 O5' G A1363 183.556 119.237 -25.911 1.00 47.19 O
ATOM 6 C5' G A1363 183.934 118.508 -27.098 1.00 47.19 C
ATOM 7 C4' G A1363 184.814 117.337 -26.724 1.00 47.19 C
ATOM 8 O4' G A1363 186.136 117.803 -26.369 1.00 47.19 O
ATOM 9 C3' G A1363 184.331 116.597 -25.492 1.00 47.19 C
ATOM 10 O3' G A1363 183.386 115.606 -25.803 1.00 47.19 O
ATOM 11 C2' G A1363 185.597 115.993 -24.919 1.00 47.19 C
ATOM 12 O2' G A1363 185.906 114.773 -25.536 1.00 47.19 O
ATOM 13 C1' G A1363 186.630 117.059 -25.270 1.00 47.19 C
ATOM 14 N9 G A1363 186.823 117.982 -24.165 1.00 44.46 N
ATOM 15 C8 G A1363 186.157 119.161 -23.964 1.00 44.46 C
ATOM 16 N7 G A1363 186.527 119.777 -22.880 1.00 44.46 N
ATOM 17 C5 G A1363 187.500 118.955 -22.337 1.00 44.46 C
ATOM 18 C6 G A1363 188.262 119.106 -21.159 1.00 44.46 C
ATOM 19 O6 G A1363 188.227 120.027 -20.334 1.00 44.46 O
ATOM 20 N1 G A1363 189.133 118.037 -20.976 1.00 44.46 N
ATOM 21 C2 G A1363 189.244 116.960 -21.820 1.00 44.46 C
ATOM 22 N2 G A1363 190.116 116.020 -21.459 1.00 44.46 N
ATOM 23 N3 G A1363 188.541 116.817 -22.930 1.00 44.46 N
ATOM 24 C4 G A1363 187.692 117.843 -23.121 1.00 44.46 C
ATOM 25 P U A1364 182.346 115.153 -24.683 1.00 43.96 P
ATOM 26 OP1 U A1364 181.417 114.191 -25.364 1.00 56.86 O
ATOM 27 OP2 U A1364 181.805 116.387 -24.041 1.00 56.86 O
ATOM 28 O5' U A1364 183.250 114.386 -23.623 1.00 43.96 O
TER
ATOM 1 O3' A B1468 190.699 114.488 -26.863 1.00 45.02 O
ATOM 2 P A B1469 189.751 115.219 -27.940 1.00 48.37 P
ATOM 3 OP1 A B1469 190.059 116.665 -27.974 1.00 61.75 O
ATOM 4 OP2 A B1469 188.345 114.779 -27.766 1.00 61.75 O
ATOM 5 O5' A B1469 190.289 114.656 -29.322 1.00 48.37 O
ATOM 6 C5' A B1469 189.858 113.384 -29.825 1.00 48.37 C
ATOM 7 C4' A B1469 191.007 112.691 -30.497 1.00 48.37 C
ATOM 8 O4' A B1469 191.533 113.568 -31.528 1.00 48.37 O
ATOM 9 C3' A B1469 192.165 112.371 -29.570 1.00 48.37 C
ATOM 10 O3' A B1469 192.436 110.981 -29.328 1.00 48.37 O
ATOM 11 C2' A B1469 193.259 113.378 -29.905 1.00 48.37 C
ATOM 12 O2' A B1469 194.581 112.892 -29.805 1.00 48.37 O
ATOM 13 C1' A B1469 192.912 113.802 -31.327 1.00 48.37 C
ATOM 14 N9 A B1469 193.141 115.238 -31.492 1.00 61.75 N
ATOM 15 C8 A B1469 192.611 116.255 -30.736 1.00 61.75 C
ATOM 16 N7 A B1469 193.007 117.448 -31.101 1.00 61.75 N
ATOM 17 C5 A B1469 193.851 117.203 -32.172 1.00 61.75 C
ATOM 18 C6 A B1469 194.597 118.058 -33.001 1.00 61.75 C
ATOM 19 N6 A B1469 194.622 119.388 -32.870 1.00 61.75 N
ATOM 20 N1 A B1469 195.332 117.495 -33.980 1.00 61.75 N
ATOM 21 C2 A B1469 195.317 116.165 -34.104 1.00 61.75 C
ATOM 22 N3 A B1469 194.664 115.258 -33.386 1.00 61.75 N
ATOM 23 C4 A B1469 193.939 115.848 -32.426 1.00 61.75 C
ATOM 24 P G B1470 192.575 109.940 -30.540 1.00 41.98 P
ATOM 25 OP1 G B1470 192.844 110.689 -31.792 1.00 43.50 O
ATOM 26 OP2 G B1470 191.458 108.976 -30.489 1.00 43.50 O
ATOM 27 O5' G B1470 193.851 109.112 -30.105 1.00 41.98 O
TER
Atoms:
OP1: (181.587,120.455,-26.861)
OP2: (182.624,121.090,-24.606)
C3': (184.331,116.597,-25.492)
C1': (186.630,117.059,-25.270)
C5': (183.934,118.508,-27.098)
O6: (188.227,120.027,-20.334)
O4': (186.136,117.803,-26.369)
C8: (186.157,119.161,-23.964)
C2: (189.244,116.960,-21.820)
C6: (188.262,119.106,-21.159)
C5: (187.500,118.955,-22.337)
C4: (187.692,117.843,-23.121)
P: (182.784,120.623,-26.003)
C4': (184.814,117.337,-26.724)
C2': (185.597,115.993,-24.919)
O2': (185.906,114.773,-25.536)
N1: (189.133,118.037,-20.976)
N2: (190.116,116.020,-21.459)
N3: (188.541,116.817,-22.930)
N7: (186.527,119.777,-22.880)
N9: (186.823,117.982,-24.165)
O5': (183.556,119.237,-25.911)
O3': (183.386,115.606,-25.803)
OP2: (182.624,121.090,-24.606)
C3': (184.331,116.597,-25.492)
C1': (186.630,117.059,-25.270)
C5': (183.934,118.508,-27.098)
O6: (188.227,120.027,-20.334)
O4': (186.136,117.803,-26.369)
C8: (186.157,119.161,-23.964)
C2: (189.244,116.960,-21.820)
C6: (188.262,119.106,-21.159)
C5: (187.500,118.955,-22.337)
C4: (187.692,117.843,-23.121)
P: (182.784,120.623,-26.003)
C4': (184.814,117.337,-26.724)
C2': (185.597,115.993,-24.919)
O2': (185.906,114.773,-25.536)
N1: (189.133,118.037,-20.976)
N2: (190.116,116.020,-21.459)
N3: (188.541,116.817,-22.930)
N7: (186.527,119.777,-22.880)
N9: (186.823,117.982,-24.165)
O5': (183.556,119.237,-25.911)
O3': (183.386,115.606,-25.803)
OP1: (190.059,116.665,-27.974)
OP2: (188.345,114.779,-27.766)
C3': (192.165,112.371,-29.570)
C1': (192.912,113.802,-31.327)
C5': (189.858,113.384,-29.825)
O4': (191.533,113.568,-31.528)
C8: (192.611,116.255,-30.736)
O2': (194.581,112.892,-29.805)
C6: (194.597,118.058,-33.001)
C5: (193.851,117.203,-32.172)
C4: (193.939,115.848,-32.426)
P: (189.751,115.219,-27.940)
C4': (191.007,112.691,-30.497)
C2': (193.259,113.378,-29.905)
C2: (195.317,116.165,-34.104)
N1: (195.332,117.495,-33.980)
N3: (194.664,115.258,-33.386)
N6: (194.622,119.388,-32.870)
N7: (193.007,117.448,-31.101)
N9: (193.141,115.238,-31.492)
O5': (190.289,114.656,-29.322)
O3': (192.436,110.981,-29.328)
OP2: (188.345,114.779,-27.766)
C3': (192.165,112.371,-29.570)
C1': (192.912,113.802,-31.327)
C5': (189.858,113.384,-29.825)
O4': (191.533,113.568,-31.528)
C8: (192.611,116.255,-30.736)
O2': (194.581,112.892,-29.805)
C6: (194.597,118.058,-33.001)
C5: (193.851,117.203,-32.172)
C4: (193.939,115.848,-32.426)
P: (189.751,115.219,-27.940)
C4': (191.007,112.691,-30.497)
C2': (193.259,113.378,-29.905)
C2: (195.317,116.165,-34.104)
N1: (195.332,117.495,-33.980)
N3: (194.664,115.258,-33.386)
N6: (194.622,119.388,-32.870)
N7: (193.007,117.448,-31.101)
N9: (193.141,115.238,-31.492)
O5': (190.289,114.656,-29.322)
O3': (192.436,110.981,-29.328)
Image (generated by PyMOL):