Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01817:01837
Extra
PDB:
ATOM 1 O3' A A1816 115.246 121.216 57.647 1.00 52.51 O
ATOM 2 P A A1817 113.725 120.922 58.076 1.00 52.91 P
ATOM 3 OP1 A A1817 113.556 119.450 58.003 1.00 52.31 O
ATOM 4 OP2 A A1817 112.832 121.815 57.269 1.00 51.94 O
ATOM 5 O5' A A1817 113.660 121.324 59.615 1.00 48.58 O
ATOM 6 C5' A A1817 114.361 120.549 60.605 1.00 47.73 C
ATOM 7 C4' A A1817 114.293 121.232 61.948 1.00 47.42 C
ATOM 8 O4' A A1817 114.885 122.552 61.834 1.00 47.74 O
ATOM 9 C3' A A1817 112.886 121.500 62.453 1.00 47.39 C
ATOM 10 O3' A A1817 112.345 120.360 63.113 1.00 48.51 O
ATOM 11 C2' A A1817 113.099 122.684 63.380 1.00 46.46 C
ATOM 12 O2' A A1817 113.688 122.289 64.599 1.00 47.44 O
ATOM 13 C1' A A1817 114.134 123.485 62.594 1.00 44.99 C
ATOM 14 N9 A A1817 113.565 124.463 61.665 1.00 42.07 N
ATOM 15 C8 A A1817 113.480 124.363 60.298 1.00 41.50 C
ATOM 16 N7 A A1817 112.964 125.421 59.722 1.00 39.99 N
ATOM 17 C5 A A1817 112.683 126.270 60.779 1.00 37.10 C
ATOM 18 C6 A A1817 112.131 127.551 60.825 1.00 38.23 C
ATOM 19 N6 A A1817 111.770 128.245 59.741 1.00 38.29 N
ATOM 20 N1 A A1817 111.962 128.115 62.033 1.00 39.63 N
ATOM 21 C2 A A1817 112.341 127.429 63.116 1.00 42.26 C
ATOM 22 N3 A A1817 112.886 126.220 63.199 1.00 41.55 N
ATOM 23 C4 A A1817 113.031 125.688 61.980 1.00 39.43 C
ATOM 24 P U A1818 110.843 119.887 62.781 1.00 48.54 P
ATOM 25 OP1 U A1818 110.511 118.770 63.696 1.00 47.40 O
ATOM 26 OP2 U A1818 110.708 119.708 61.310 1.00 45.54 O
ATOM 27 O5' U A1818 109.963 121.147 63.184 1.00 47.29 O
TER
ATOM 1 O3' G B1836 111.852 132.843 66.353 1.00 50.99 O
ATOM 2 P U B1837 110.702 132.740 67.501 1.00 52.04 P
ATOM 3 OP1 U B1837 109.501 133.462 67.007 1.00 52.90 O
ATOM 4 OP2 U B1837 111.242 133.093 68.843 1.00 49.40 O
ATOM 5 O5' U B1837 110.357 131.182 67.510 1.00 49.92 O
ATOM 6 C5' U B1837 109.859 130.552 66.313 1.00 49.02 C
ATOM 7 C4' U B1837 110.035 129.054 66.372 1.00 48.48 C
ATOM 8 O4' U B1837 111.440 128.703 66.429 1.00 47.50 O
ATOM 9 C3' U B1837 109.443 128.362 67.579 1.00 48.29 C
ATOM 10 O3' U B1837 108.046 128.186 67.421 1.00 47.50 O
ATOM 11 C2' U B1837 110.203 127.042 67.592 1.00 47.55 C
ATOM 12 O2' U B1837 109.729 126.121 66.633 1.00 49.14 O
ATOM 13 C1' U B1837 111.596 127.495 67.155 1.00 45.91 C
ATOM 14 N1 U B1837 112.520 127.730 68.272 1.00 42.95 N
ATOM 15 C2 U B1837 113.313 126.679 68.692 1.00 44.68 C
ATOM 16 O2 U B1837 113.252 125.556 68.216 1.00 45.60 O
ATOM 17 N3 U B1837 114.181 126.985 69.702 1.00 45.08 N
ATOM 18 C4 U B1837 114.327 128.194 70.324 1.00 44.34 C
ATOM 19 O4 U B1837 115.200 128.332 71.173 1.00 46.90 O
ATOM 20 C5 U B1837 113.457 129.208 69.856 1.00 43.44 C
ATOM 21 C6 U B1837 112.604 128.947 68.870 1.00 42.02 C
ATOM 22 P C B1838 107.112 128.151 68.717 1.00 48.60 P
ATOM 23 OP1 C B1838 105.703 128.033 68.257 1.00 48.55 O
ATOM 24 OP2 C B1838 107.504 129.278 69.612 1.00 49.86 O
ATOM 25 O5' C B1838 107.551 126.811 69.447 1.00 47.40 O
TER
ATOM 2 P A A1817 113.725 120.922 58.076 1.00 52.91 P
ATOM 3 OP1 A A1817 113.556 119.450 58.003 1.00 52.31 O
ATOM 4 OP2 A A1817 112.832 121.815 57.269 1.00 51.94 O
ATOM 5 O5' A A1817 113.660 121.324 59.615 1.00 48.58 O
ATOM 6 C5' A A1817 114.361 120.549 60.605 1.00 47.73 C
ATOM 7 C4' A A1817 114.293 121.232 61.948 1.00 47.42 C
ATOM 8 O4' A A1817 114.885 122.552 61.834 1.00 47.74 O
ATOM 9 C3' A A1817 112.886 121.500 62.453 1.00 47.39 C
ATOM 10 O3' A A1817 112.345 120.360 63.113 1.00 48.51 O
ATOM 11 C2' A A1817 113.099 122.684 63.380 1.00 46.46 C
ATOM 12 O2' A A1817 113.688 122.289 64.599 1.00 47.44 O
ATOM 13 C1' A A1817 114.134 123.485 62.594 1.00 44.99 C
ATOM 14 N9 A A1817 113.565 124.463 61.665 1.00 42.07 N
ATOM 15 C8 A A1817 113.480 124.363 60.298 1.00 41.50 C
ATOM 16 N7 A A1817 112.964 125.421 59.722 1.00 39.99 N
ATOM 17 C5 A A1817 112.683 126.270 60.779 1.00 37.10 C
ATOM 18 C6 A A1817 112.131 127.551 60.825 1.00 38.23 C
ATOM 19 N6 A A1817 111.770 128.245 59.741 1.00 38.29 N
ATOM 20 N1 A A1817 111.962 128.115 62.033 1.00 39.63 N
ATOM 21 C2 A A1817 112.341 127.429 63.116 1.00 42.26 C
ATOM 22 N3 A A1817 112.886 126.220 63.199 1.00 41.55 N
ATOM 23 C4 A A1817 113.031 125.688 61.980 1.00 39.43 C
ATOM 24 P U A1818 110.843 119.887 62.781 1.00 48.54 P
ATOM 25 OP1 U A1818 110.511 118.770 63.696 1.00 47.40 O
ATOM 26 OP2 U A1818 110.708 119.708 61.310 1.00 45.54 O
ATOM 27 O5' U A1818 109.963 121.147 63.184 1.00 47.29 O
TER
ATOM 1 O3' G B1836 111.852 132.843 66.353 1.00 50.99 O
ATOM 2 P U B1837 110.702 132.740 67.501 1.00 52.04 P
ATOM 3 OP1 U B1837 109.501 133.462 67.007 1.00 52.90 O
ATOM 4 OP2 U B1837 111.242 133.093 68.843 1.00 49.40 O
ATOM 5 O5' U B1837 110.357 131.182 67.510 1.00 49.92 O
ATOM 6 C5' U B1837 109.859 130.552 66.313 1.00 49.02 C
ATOM 7 C4' U B1837 110.035 129.054 66.372 1.00 48.48 C
ATOM 8 O4' U B1837 111.440 128.703 66.429 1.00 47.50 O
ATOM 9 C3' U B1837 109.443 128.362 67.579 1.00 48.29 C
ATOM 10 O3' U B1837 108.046 128.186 67.421 1.00 47.50 O
ATOM 11 C2' U B1837 110.203 127.042 67.592 1.00 47.55 C
ATOM 12 O2' U B1837 109.729 126.121 66.633 1.00 49.14 O
ATOM 13 C1' U B1837 111.596 127.495 67.155 1.00 45.91 C
ATOM 14 N1 U B1837 112.520 127.730 68.272 1.00 42.95 N
ATOM 15 C2 U B1837 113.313 126.679 68.692 1.00 44.68 C
ATOM 16 O2 U B1837 113.252 125.556 68.216 1.00 45.60 O
ATOM 17 N3 U B1837 114.181 126.985 69.702 1.00 45.08 N
ATOM 18 C4 U B1837 114.327 128.194 70.324 1.00 44.34 C
ATOM 19 O4 U B1837 115.200 128.332 71.173 1.00 46.90 O
ATOM 20 C5 U B1837 113.457 129.208 69.856 1.00 43.44 C
ATOM 21 C6 U B1837 112.604 128.947 68.870 1.00 42.02 C
ATOM 22 P C B1838 107.112 128.151 68.717 1.00 48.60 P
ATOM 23 OP1 C B1838 105.703 128.033 68.257 1.00 48.55 O
ATOM 24 OP2 C B1838 107.504 129.278 69.612 1.00 49.86 O
ATOM 25 O5' C B1838 107.551 126.811 69.447 1.00 47.40 O
TER
Atoms:
OP1: (113.556,119.450,58.003)
OP2: (112.832,121.815,57.269)
C3': (112.886,121.500,62.453)
C1': (114.134,123.485,62.594)
C5': (114.361,120.549,60.605)
O4': (114.885,122.552,61.834)
C8: (113.480,124.363,60.298)
O2': (113.688,122.289,64.599)
C6: (112.131,127.551,60.825)
C5: (112.683,126.270,60.779)
C4: (113.031,125.688,61.980)
P: (113.725,120.922,58.076)
C4': (114.293,121.232,61.948)
C2': (113.099,122.684,63.380)
C2: (112.341,127.429,63.116)
N1: (111.962,128.115,62.033)
N3: (112.886,126.220,63.199)
N6: (111.770,128.245,59.741)
N7: (112.964,125.421,59.722)
N9: (113.565,124.463,61.665)
O5': (113.660,121.324,59.615)
O3': (112.345,120.360,63.113)
OP2: (112.832,121.815,57.269)
C3': (112.886,121.500,62.453)
C1': (114.134,123.485,62.594)
C5': (114.361,120.549,60.605)
O4': (114.885,122.552,61.834)
C8: (113.480,124.363,60.298)
O2': (113.688,122.289,64.599)
C6: (112.131,127.551,60.825)
C5: (112.683,126.270,60.779)
C4: (113.031,125.688,61.980)
P: (113.725,120.922,58.076)
C4': (114.293,121.232,61.948)
C2': (113.099,122.684,63.380)
C2: (112.341,127.429,63.116)
N1: (111.962,128.115,62.033)
N3: (112.886,126.220,63.199)
N6: (111.770,128.245,59.741)
N7: (112.964,125.421,59.722)
N9: (113.565,124.463,61.665)
O5': (113.660,121.324,59.615)
O3': (112.345,120.360,63.113)
C4: (114.327,128.194,70.324)
N3: (114.181,126.985,69.702)
OP1: (109.501,133.462,67.007)
OP2: (111.242,133.093,68.843)
C2: (113.313,126.679,68.692)
C1': (111.596,127.495,67.155)
C3': (109.443,128.362,67.579)
O5': (110.357,131.182,67.510)
O4': (111.440,128.703,66.429)
C5': (109.859,130.552,66.313)
P: (110.702,132.740,67.501)
C4': (110.035,129.054,66.372)
C2': (110.203,127.042,67.592)
O2': (109.729,126.121,66.633)
N1: (112.520,127.730,68.272)
O4: (115.200,128.332,71.173)
O2: (113.252,125.556,68.216)
C6: (112.604,128.947,68.870)
C5: (113.457,129.208,69.856)
O3': (108.046,128.186,67.421)
N3: (114.181,126.985,69.702)
OP1: (109.501,133.462,67.007)
OP2: (111.242,133.093,68.843)
C2: (113.313,126.679,68.692)
C1': (111.596,127.495,67.155)
C3': (109.443,128.362,67.579)
O5': (110.357,131.182,67.510)
O4': (111.440,128.703,66.429)
C5': (109.859,130.552,66.313)
P: (110.702,132.740,67.501)
C4': (110.035,129.054,66.372)
C2': (110.203,127.042,67.592)
O2': (109.729,126.121,66.633)
N1: (112.520,127.730,68.272)
O4: (115.200,128.332,71.173)
O2: (113.252,125.556,68.216)
C6: (112.604,128.947,68.870)
C5: (113.457,129.208,69.856)
O3': (108.046,128.186,67.421)
Image (generated by PyMOL):