Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1390:A1501
Extra
PDB:
ATOM 1 O3' U A1389 -36.776 106.952 61.946 1.00 17.84 O
ATOM 2 P G A1390 -36.720 105.645 62.862 1.00 10.98 P
ATOM 3 OP1 G A1390 -35.275 105.392 63.192 1.00 10.98 O
ATOM 4 OP2 G A1390 -37.491 104.587 62.147 1.00 10.98 O
ATOM 5 O5' G A1390 -37.518 106.106 64.177 1.00 10.98 O
ATOM 6 C5' G A1390 -36.847 106.716 65.274 1.00 10.98 C
ATOM 7 C4' G A1390 -37.793 107.018 66.415 1.00 10.98 C
ATOM 8 O4' G A1390 -38.989 107.675 65.914 1.00 10.98 O
ATOM 9 C3' G A1390 -38.333 105.823 67.174 1.00 10.98 C
ATOM 10 O3' G A1390 -37.423 105.311 68.115 1.00 10.98 O
ATOM 11 C2' G A1390 -39.589 106.383 67.799 1.00 10.98 C
ATOM 12 O2' G A1390 -39.262 107.224 68.900 1.00 10.98 O
ATOM 13 C1' G A1390 -40.111 107.250 66.659 1.00 10.98 C
ATOM 14 N9 G A1390 -41.001 106.498 65.757 1.00 10.66 N
ATOM 15 C8 G A1390 -40.603 105.924 64.584 1.00 10.66 C
ATOM 16 N7 G A1390 -41.560 105.345 63.939 1.00 10.66 N
ATOM 17 C5 G A1390 -42.670 105.543 64.743 1.00 10.66 C
ATOM 18 C6 G A1390 -44.021 105.130 64.565 1.00 10.66 C
ATOM 19 O6 G A1390 -44.552 104.491 63.648 1.00 10.66 O
ATOM 20 N1 G A1390 -44.821 105.539 65.595 1.00 10.66 N
ATOM 21 C2 G A1390 -44.388 106.247 66.652 1.00 10.66 C
ATOM 22 N2 G A1390 -45.366 106.520 67.511 1.00 10.66 N
ATOM 23 N3 G A1390 -43.143 106.639 66.850 1.00 10.66 N
ATOM 24 C4 G A1390 -42.339 106.256 65.861 1.00 10.66 C
ATOM 25 P U A1391 -37.253 103.721 68.261 1.00 12.98 P
ATOM 26 OP1 U A1391 -36.003 103.471 69.059 1.00 12.98 O
ATOM 27 OP2 U A1391 -37.347 103.152 66.888 1.00 12.98 O
ATOM 28 O5' U A1391 -38.551 103.308 69.099 1.00 12.98 O
TER
ATOM 1 O3' A B1500 -42.058 109.692 69.451 1.00 3.11 O
ATOM 2 P A B1501 -40.758 110.631 69.244 1.00 18.19 P
ATOM 3 OP1 A B1501 -40.847 111.211 67.894 1.00 18.19 O
ATOM 4 OP2 A B1501 -39.568 109.818 69.587 1.00 18.19 O
ATOM 5 O5' A B1501 -40.957 111.771 70.322 1.00 18.19 O
ATOM 6 C5' A B1501 -39.863 112.176 71.126 1.00 18.19 C
ATOM 7 C4' A B1501 -40.126 113.478 71.830 1.00 18.19 C
ATOM 8 O4' A B1501 -39.975 114.572 70.889 1.00 18.19 O
ATOM 9 C3' A B1501 -41.518 113.629 72.417 1.00 18.19 C
ATOM 10 O3' A B1501 -41.447 114.507 73.540 1.00 18.19 O
ATOM 11 C2' A B1501 -42.258 114.312 71.279 1.00 18.19 C
ATOM 12 O2' A B1501 -43.439 114.979 71.650 1.00 18.19 O
ATOM 13 C1' A B1501 -41.193 115.279 70.796 1.00 18.19 C
ATOM 14 N9 A B1501 -41.359 115.704 69.418 1.00 19.04 N
ATOM 15 C8 A B1501 -41.298 114.925 68.302 1.00 19.04 C
ATOM 16 N7 A B1501 -41.472 115.600 67.195 1.00 19.04 N
ATOM 17 C5 A B1501 -41.654 116.914 67.631 1.00 19.04 C
ATOM 18 C6 A B1501 -41.886 118.128 66.949 1.00 19.04 C
ATOM 19 N6 A B1501 -41.979 118.259 65.612 1.00 19.04 N
ATOM 20 N1 A B1501 -42.017 119.234 67.721 1.00 19.04 N
ATOM 21 C2 A B1501 -41.920 119.137 69.054 1.00 19.04 C
ATOM 22 N3 A B1501 -41.705 118.062 69.796 1.00 19.04 N
ATOM 23 C4 A B1501 -41.581 116.981 69.011 1.00 19.04 C
ATOM 24 P G B1502 -41.082 113.932 75.004 1.00 0.05 P
ATOM 25 OP1 G B1502 -41.085 115.093 75.955 1.00 0.05 O
ATOM 26 OP2 G B1502 -39.834 113.115 74.873 1.00 0.05 O
ATOM 27 O5' G B1502 -42.320 112.980 75.288 1.00 0.05 O
TER
ATOM 2 P G A1390 -36.720 105.645 62.862 1.00 10.98 P
ATOM 3 OP1 G A1390 -35.275 105.392 63.192 1.00 10.98 O
ATOM 4 OP2 G A1390 -37.491 104.587 62.147 1.00 10.98 O
ATOM 5 O5' G A1390 -37.518 106.106 64.177 1.00 10.98 O
ATOM 6 C5' G A1390 -36.847 106.716 65.274 1.00 10.98 C
ATOM 7 C4' G A1390 -37.793 107.018 66.415 1.00 10.98 C
ATOM 8 O4' G A1390 -38.989 107.675 65.914 1.00 10.98 O
ATOM 9 C3' G A1390 -38.333 105.823 67.174 1.00 10.98 C
ATOM 10 O3' G A1390 -37.423 105.311 68.115 1.00 10.98 O
ATOM 11 C2' G A1390 -39.589 106.383 67.799 1.00 10.98 C
ATOM 12 O2' G A1390 -39.262 107.224 68.900 1.00 10.98 O
ATOM 13 C1' G A1390 -40.111 107.250 66.659 1.00 10.98 C
ATOM 14 N9 G A1390 -41.001 106.498 65.757 1.00 10.66 N
ATOM 15 C8 G A1390 -40.603 105.924 64.584 1.00 10.66 C
ATOM 16 N7 G A1390 -41.560 105.345 63.939 1.00 10.66 N
ATOM 17 C5 G A1390 -42.670 105.543 64.743 1.00 10.66 C
ATOM 18 C6 G A1390 -44.021 105.130 64.565 1.00 10.66 C
ATOM 19 O6 G A1390 -44.552 104.491 63.648 1.00 10.66 O
ATOM 20 N1 G A1390 -44.821 105.539 65.595 1.00 10.66 N
ATOM 21 C2 G A1390 -44.388 106.247 66.652 1.00 10.66 C
ATOM 22 N2 G A1390 -45.366 106.520 67.511 1.00 10.66 N
ATOM 23 N3 G A1390 -43.143 106.639 66.850 1.00 10.66 N
ATOM 24 C4 G A1390 -42.339 106.256 65.861 1.00 10.66 C
ATOM 25 P U A1391 -37.253 103.721 68.261 1.00 12.98 P
ATOM 26 OP1 U A1391 -36.003 103.471 69.059 1.00 12.98 O
ATOM 27 OP2 U A1391 -37.347 103.152 66.888 1.00 12.98 O
ATOM 28 O5' U A1391 -38.551 103.308 69.099 1.00 12.98 O
TER
ATOM 1 O3' A B1500 -42.058 109.692 69.451 1.00 3.11 O
ATOM 2 P A B1501 -40.758 110.631 69.244 1.00 18.19 P
ATOM 3 OP1 A B1501 -40.847 111.211 67.894 1.00 18.19 O
ATOM 4 OP2 A B1501 -39.568 109.818 69.587 1.00 18.19 O
ATOM 5 O5' A B1501 -40.957 111.771 70.322 1.00 18.19 O
ATOM 6 C5' A B1501 -39.863 112.176 71.126 1.00 18.19 C
ATOM 7 C4' A B1501 -40.126 113.478 71.830 1.00 18.19 C
ATOM 8 O4' A B1501 -39.975 114.572 70.889 1.00 18.19 O
ATOM 9 C3' A B1501 -41.518 113.629 72.417 1.00 18.19 C
ATOM 10 O3' A B1501 -41.447 114.507 73.540 1.00 18.19 O
ATOM 11 C2' A B1501 -42.258 114.312 71.279 1.00 18.19 C
ATOM 12 O2' A B1501 -43.439 114.979 71.650 1.00 18.19 O
ATOM 13 C1' A B1501 -41.193 115.279 70.796 1.00 18.19 C
ATOM 14 N9 A B1501 -41.359 115.704 69.418 1.00 19.04 N
ATOM 15 C8 A B1501 -41.298 114.925 68.302 1.00 19.04 C
ATOM 16 N7 A B1501 -41.472 115.600 67.195 1.00 19.04 N
ATOM 17 C5 A B1501 -41.654 116.914 67.631 1.00 19.04 C
ATOM 18 C6 A B1501 -41.886 118.128 66.949 1.00 19.04 C
ATOM 19 N6 A B1501 -41.979 118.259 65.612 1.00 19.04 N
ATOM 20 N1 A B1501 -42.017 119.234 67.721 1.00 19.04 N
ATOM 21 C2 A B1501 -41.920 119.137 69.054 1.00 19.04 C
ATOM 22 N3 A B1501 -41.705 118.062 69.796 1.00 19.04 N
ATOM 23 C4 A B1501 -41.581 116.981 69.011 1.00 19.04 C
ATOM 24 P G B1502 -41.082 113.932 75.004 1.00 0.05 P
ATOM 25 OP1 G B1502 -41.085 115.093 75.955 1.00 0.05 O
ATOM 26 OP2 G B1502 -39.834 113.115 74.873 1.00 0.05 O
ATOM 27 O5' G B1502 -42.320 112.980 75.288 1.00 0.05 O
TER
Atoms:
OP1: (-35.275,105.392,63.192)
OP2: (-37.491,104.587,62.147)
C3': (-38.333,105.823,67.174)
C1': (-40.111,107.250,66.659)
C5': (-36.847,106.716,65.274)
O6: (-44.552,104.491,63.648)
O4': (-38.989,107.675,65.914)
C8: (-40.603,105.924,64.584)
C2: (-44.388,106.247,66.652)
C6: (-44.021,105.130,64.565)
C5: (-42.670,105.543,64.743)
C4: (-42.339,106.256,65.861)
P: (-36.720,105.645,62.862)
C4': (-37.793,107.018,66.415)
C2': (-39.589,106.383,67.799)
O2': (-39.262,107.224,68.900)
N1: (-44.821,105.539,65.595)
N2: (-45.366,106.520,67.511)
N3: (-43.143,106.639,66.850)
N7: (-41.560,105.345,63.939)
N9: (-41.001,106.498,65.757)
O5': (-37.518,106.106,64.177)
O3': (-37.423,105.311,68.115)
OP2: (-37.491,104.587,62.147)
C3': (-38.333,105.823,67.174)
C1': (-40.111,107.250,66.659)
C5': (-36.847,106.716,65.274)
O6: (-44.552,104.491,63.648)
O4': (-38.989,107.675,65.914)
C8: (-40.603,105.924,64.584)
C2: (-44.388,106.247,66.652)
C6: (-44.021,105.130,64.565)
C5: (-42.670,105.543,64.743)
C4: (-42.339,106.256,65.861)
P: (-36.720,105.645,62.862)
C4': (-37.793,107.018,66.415)
C2': (-39.589,106.383,67.799)
O2': (-39.262,107.224,68.900)
N1: (-44.821,105.539,65.595)
N2: (-45.366,106.520,67.511)
N3: (-43.143,106.639,66.850)
N7: (-41.560,105.345,63.939)
N9: (-41.001,106.498,65.757)
O5': (-37.518,106.106,64.177)
O3': (-37.423,105.311,68.115)
OP1: (-40.847,111.211,67.894)
OP2: (-39.568,109.818,69.587)
C3': (-41.518,113.629,72.417)
C1': (-41.193,115.279,70.796)
C5': (-39.863,112.176,71.126)
O4': (-39.975,114.572,70.889)
C8: (-41.298,114.925,68.302)
O2': (-43.439,114.979,71.650)
C6: (-41.886,118.128,66.949)
C5: (-41.654,116.914,67.631)
C4: (-41.581,116.981,69.011)
P: (-40.758,110.631,69.244)
C4': (-40.126,113.478,71.830)
C2': (-42.258,114.312,71.279)
C2: (-41.920,119.137,69.054)
N1: (-42.017,119.234,67.721)
N3: (-41.705,118.062,69.796)
N6: (-41.979,118.259,65.612)
N7: (-41.472,115.600,67.195)
N9: (-41.359,115.704,69.418)
O5': (-40.957,111.771,70.322)
O3': (-41.447,114.507,73.540)
OP2: (-39.568,109.818,69.587)
C3': (-41.518,113.629,72.417)
C1': (-41.193,115.279,70.796)
C5': (-39.863,112.176,71.126)
O4': (-39.975,114.572,70.889)
C8: (-41.298,114.925,68.302)
O2': (-43.439,114.979,71.650)
C6: (-41.886,118.128,66.949)
C5: (-41.654,116.914,67.631)
C4: (-41.581,116.981,69.011)
P: (-40.758,110.631,69.244)
C4': (-40.126,113.478,71.830)
C2': (-42.258,114.312,71.279)
C2: (-41.920,119.137,69.054)
N1: (-42.017,119.234,67.721)
N3: (-41.705,118.062,69.796)
N6: (-41.979,118.259,65.612)
N7: (-41.472,115.600,67.195)
N9: (-41.359,115.704,69.418)
O5': (-40.957,111.771,70.322)
O3': (-41.447,114.507,73.540)
Image (generated by PyMOL):