ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0899:01001

Extra

PDB:
ATOM 1 O3' G A 898 35.467 90.283 83.389 1.00 32.02 O
ATOM 2 P A A 899 35.696 90.631 84.943 1.00 32.65 P
ATOM 3 OP1 A A 899 36.162 89.391 85.607 1.00 27.82 O
ATOM 4 OP2 A A 899 34.508 91.348 85.465 1.00 31.16 O
ATOM 5 O5' A A 899 36.884 91.694 84.926 1.00 34.41 O
ATOM 6 C5' A A 899 38.230 91.306 85.225 1.00 30.08 C
ATOM 7 C4' A A 899 38.951 90.930 83.960 1.00 30.78 C
ATOM 8 O4' A A 899 38.814 91.991 82.980 1.00 30.10 O
ATOM 9 C3' A A 899 40.442 90.740 84.152 1.00 31.55 C
ATOM 10 O3' A A 899 40.729 89.409 84.552 1.00 31.49 O
ATOM 11 C2' A A 899 41.007 91.100 82.787 1.00 31.27 C
ATOM 12 O2' A A 899 40.894 90.039 81.867 1.00 31.09 O
ATOM 13 C1' A A 899 40.069 92.239 82.368 1.00 31.90 C
ATOM 14 N9 A A 899 40.510 93.570 82.795 1.00 33.11 N
ATOM 15 C8 A A 899 39.798 94.473 83.544 1.00 32.54 C
ATOM 16 N7 A A 899 40.422 95.600 83.748 1.00 32.91 N
ATOM 17 C5 A A 899 41.634 95.433 83.092 1.00 34.09 C
ATOM 18 C6 A A 899 42.739 96.284 82.913 1.00 32.80 C
ATOM 19 N6 A A 899 42.804 97.527 83.390 1.00 32.13 N
ATOM 20 N1 A A 899 43.784 95.811 82.212 1.00 32.92 N
ATOM 21 C2 A A 899 43.717 94.572 81.719 1.00 34.26 C
ATOM 22 N3 A A 899 42.734 93.683 81.807 1.00 35.47 N
ATOM 23 C4 A A 899 41.708 94.181 82.515 1.00 33.98 C
ATOM 24 P A A 900 41.759 89.150 85.750 1.00 32.94 P
ATOM 25 OP1 A A 900 41.834 87.691 85.977 1.00 30.95 O
ATOM 26 OP2 A A 900 41.386 90.060 86.869 1.00 30.99 O
ATOM 27 O5' A A 900 43.160 89.625 85.161 1.00 34.04 O
TER

ATOM 1 O3' U B1000 45.805 98.708 77.812 1.00 31.70 O
ATOM 2 P U B1001 47.303 98.861 78.387 1.00 31.89 P
ATOM 3 OP1 U B1001 47.284 100.048 79.274 1.00 29.41 O
ATOM 4 OP2 U B1001 48.258 98.802 77.256 1.00 31.16 O
ATOM 5 O5' U B1001 47.534 97.571 79.292 1.00 30.98 O
ATOM 6 C5' U B1001 46.797 97.378 80.515 1.00 31.95 C
ATOM 7 C4' U B1001 47.158 96.053 81.142 1.00 31.84 C
ATOM 8 O4' U B1001 46.814 94.968 80.240 1.00 34.17 O
ATOM 9 C3' U B1001 48.636 95.851 81.397 1.00 31.21 C
ATOM 10 O3' U B1001 49.024 96.460 82.610 1.00 31.00 O
ATOM 11 C2' U B1001 48.755 94.340 81.455 1.00 31.83 C
ATOM 12 O2' U B1001 48.326 93.828 82.700 1.00 34.29 O
ATOM 13 C1' U B1001 47.772 93.927 80.359 1.00 30.93 C
ATOM 14 N1 U B1001 48.417 93.740 79.054 1.00 29.90 N
ATOM 15 C2 U B1001 49.133 92.574 78.853 1.00 30.18 C
ATOM 16 O2 U B1001 49.248 91.717 79.703 1.00 31.43 O
ATOM 17 N3 U B1001 49.711 92.453 77.613 1.00 30.41 N
ATOM 18 C4 U B1001 49.644 93.362 76.574 1.00 30.85 C
ATOM 19 O4 U B1001 50.169 93.088 75.494 1.00 33.21 O
ATOM 20 C5 U B1001 48.892 94.544 76.863 1.00 29.38 C
ATOM 21 C6 U B1001 48.318 94.689 78.059 1.00 29.22 C
ATOM 22 P C B1002 50.512 97.020 82.769 1.00 30.63 P
ATOM 23 OP1 C B1002 50.534 97.762 84.051 1.00 29.00 O
ATOM 24 OP2 C B1002 50.911 97.694 81.510 1.00 31.17 O
ATOM 25 O5' C B1002 51.414 95.720 82.891 1.00 29.40 O
TER

Atoms:
OP1: (36.162,89.391,85.607)
OP2: (34.508,91.348,85.465)
C3': (40.442,90.740,84.152)
C1': (40.069,92.239,82.368)
C5': (38.230,91.306,85.225)
O4': (38.814,91.991,82.980)
C8: (39.798,94.473,83.544)
O2': (40.894,90.039,81.867)
C6: (42.739,96.284,82.913)
C5: (41.634,95.433,83.092)
C4: (41.708,94.181,82.515)
P: (35.696,90.631,84.943)
C4': (38.951,90.930,83.960)
C2': (41.007,91.100,82.787)
C2: (43.717,94.572,81.719)
N1: (43.784,95.811,82.212)
N3: (42.734,93.683,81.807)
N6: (42.804,97.527,83.390)
N7: (40.422,95.600,83.748)
N9: (40.510,93.570,82.795)
O5': (36.884,91.694,84.926)
O3': (40.729,89.409,84.552)
C4: (49.644,93.362,76.574)
N3: (49.711,92.453,77.613)
OP1: (47.284,100.048,79.274)
OP2: (48.258,98.802,77.256)
C2: (49.133,92.574,78.853)
C1': (47.772,93.927,80.359)
C3': (48.636,95.851,81.397)
O5': (47.534,97.571,79.292)
O4': (46.814,94.968,80.240)
C5': (46.797,97.378,80.515)
P: (47.303,98.861,78.387)
C4': (47.158,96.053,81.142)
C2': (48.755,94.340,81.455)
O2': (48.326,93.828,82.700)
N1: (48.417,93.740,79.054)
O4: (50.169,93.088,75.494)
O2: (49.248,91.717,79.703)
C6: (48.318,94.689,78.059)
C5: (48.892,94.544,76.863)
O3': (49.024,96.460,82.610)
Image (generated by PyMOL):
PyMOL image
show in jmol