ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A941:A924

Extra

PDB:
ATOM 1 O3' A A 940 -76.598 101.876 75.423 1.00 25.47 O
ATOM 2 P A A 941 -78.177 101.601 75.567 1.00 46.03 P
ATOM 3 OP1 A A 941 -78.363 100.166 75.898 1.00 69.01 O
ATOM 4 OP2 A A 941 -78.859 102.169 74.379 1.00 70.78 O
ATOM 5 O5' A A 941 -78.612 102.460 76.834 1.00 28.21 O
ATOM 6 C5' A A 941 -78.097 102.145 78.131 1.00 26.87 C
ATOM 7 C4' A A 941 -79.196 101.589 79.001 1.00 26.48 C
ATOM 8 O4' A A 941 -78.622 101.168 80.271 1.00 26.70 O
ATOM 9 C3' A A 941 -80.280 102.582 79.385 1.00 26.45 C
ATOM 10 O3' A A 941 -81.288 102.724 78.403 1.00 26.08 O
ATOM 11 C2' A A 941 -80.802 102.016 80.700 1.00 26.94 C
ATOM 12 O2' A A 941 -81.741 100.976 80.511 1.00 26.47 O
ATOM 13 C1' A A 941 -79.509 101.492 81.337 1.00 27.03 C
ATOM 14 N9 A A 941 -78.871 102.536 82.156 1.00 43.10 N
ATOM 15 C8 A A 941 -77.770 103.315 81.849 1.00 43.15 C
ATOM 16 N7 A A 941 -77.497 104.225 82.751 1.00 44.25 N
ATOM 17 C5 A A 941 -78.464 104.021 83.727 1.00 43.25 C
ATOM 18 C6 A A 941 -78.724 104.668 84.939 1.00 43.86 C
ATOM 19 N6 A A 941 -78.004 105.693 85.393 1.00 44.83 N
ATOM 20 N1 A A 941 -79.765 104.224 85.681 1.00 44.67 N
ATOM 21 C2 A A 941 -80.484 103.195 85.223 1.00 45.75 C
ATOM 22 N3 A A 941 -80.336 102.502 84.100 1.00 44.08 N
ATOM 23 C4 A A 941 -79.300 102.973 83.385 1.00 42.84 C
ATOM 24 P C A 942 -82.057 104.129 78.267 1.00 26.45 P
ATOM 25 OP1 C A 942 -83.160 103.936 77.296 1.00 43.92 O
ATOM 26 OP2 C A 942 -81.040 105.189 78.024 1.00 42.35 O
ATOM 27 O5' C A 942 -82.719 104.341 79.705 1.00 27.86 O
TER

ATOM 1 O3' G B 923 -89.215 101.801 84.931 1.00 17.22 O
ATOM 2 P U B 924 -88.954 101.053 86.346 1.00 20.34 P
ATOM 3 OP1 U B 924 -88.695 99.626 86.014 1.00 47.43 O
ATOM 4 OP2 U B 924 -90.038 101.397 87.312 1.00 43.83 O
ATOM 5 O5' U B 924 -87.586 101.679 86.867 1.00 39.51 O
ATOM 6 C5' U B 924 -86.375 101.481 86.119 1.00 39.05 C
ATOM 7 C4' U B 924 -85.212 102.183 86.776 1.00 38.98 C
ATOM 8 O4' U B 924 -85.410 103.621 86.735 1.00 40.12 O
ATOM 9 C3' U B 924 -84.963 101.896 88.245 1.00 38.31 C
ATOM 10 O3' U B 924 -84.262 100.697 88.490 1.00 38.48 O
ATOM 11 C2' U B 924 -84.132 103.094 88.658 1.00 38.98 C
ATOM 12 O2' U B 924 -82.795 102.960 88.214 1.00 39.23 O
ATOM 13 C1' U B 924 -84.814 104.214 87.878 1.00 39.29 C
ATOM 14 N1 U B 924 -85.864 104.849 88.695 1.00 32.15 N
ATOM 15 C2 U B 924 -85.461 105.673 89.740 1.00 30.34 C
ATOM 16 O2 U B 924 -84.292 105.902 89.993 1.00 30.68 O
ATOM 17 N3 U B 924 -86.478 106.219 90.476 1.00 28.71 N
ATOM 18 C4 U B 924 -87.825 106.041 90.281 1.00 27.45 C
ATOM 19 O4 U B 924 -88.626 106.623 91.015 1.00 24.84 O
ATOM 20 C5 U B 924 -88.161 105.183 89.184 1.00 29.74 C
ATOM 21 C6 U B 924 -87.193 104.631 88.449 1.00 31.37 C
ATOM 22 P G B 925 -84.365 100.027 89.942 1.00 13.84 P
ATOM 23 OP1 G B 925 -83.727 98.693 89.889 1.00 14.62 O
ATOM 24 OP2 G B 925 -85.783 100.142 90.401 1.00 12.81 O
ATOM 25 O5' G B 925 -83.469 100.977 90.857 1.00 48.50 O
TER

Atoms:
OP1: (-78.363,100.166,75.898)
OP2: (-78.859,102.169,74.379)
C3': (-80.280,102.582,79.385)
C1': (-79.509,101.492,81.337)
C5': (-78.097,102.145,78.131)
O4': (-78.622,101.168,80.271)
C8: (-77.770,103.315,81.849)
O2': (-81.741,100.976,80.511)
C6: (-78.724,104.668,84.939)
C5: (-78.464,104.021,83.727)
C4: (-79.300,102.973,83.385)
P: (-78.177,101.601,75.567)
C4': (-79.196,101.589,79.001)
C2': (-80.802,102.016,80.700)
C2: (-80.484,103.195,85.223)
N1: (-79.765,104.224,85.681)
N3: (-80.336,102.502,84.100)
N6: (-78.004,105.693,85.393)
N7: (-77.497,104.225,82.751)
N9: (-78.871,102.536,82.156)
O5': (-78.612,102.460,76.834)
O3': (-81.288,102.724,78.403)
C4: (-87.825,106.041,90.281)
N3: (-86.478,106.219,90.476)
OP1: (-88.695,99.626,86.014)
OP2: (-90.038,101.397,87.312)
C2: (-85.461,105.673,89.740)
C1': (-84.814,104.214,87.878)
C3': (-84.963,101.896,88.245)
O5': (-87.586,101.679,86.867)
O4': (-85.410,103.621,86.735)
C5': (-86.375,101.481,86.119)
P: (-88.954,101.053,86.346)
C4': (-85.212,102.183,86.776)
C2': (-84.132,103.094,88.658)
O2': (-82.795,102.960,88.214)
N1: (-85.864,104.849,88.695)
O4: (-88.626,106.623,91.015)
O2: (-84.292,105.902,89.993)
C6: (-87.193,104.631,88.449)
C5: (-88.161,105.183,89.184)
O3': (-84.262,100.697,88.490)
Image (generated by PyMOL):
PyMOL image
show in jmol