Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1688:1920
Extra
PDB:
ATOM 1 O3' C A 687 79.002 -59.320 62.744 1.00 50.10 O
ATOM 2 P A A 688 77.421 -59.092 62.681 1.00 52.28 P
ATOM 3 OP1 A A 688 76.916 -59.297 64.080 1.00 52.26 O
ATOM 4 OP2 A A 688 76.878 -59.945 61.579 1.00 52.49 O
ATOM 5 O5' A A 688 77.316 -57.548 62.261 1.00 51.77 O
ATOM 6 C5' A A 688 77.591 -56.504 63.182 1.00 51.48 C
ATOM 7 C4' A A 688 77.586 -55.168 62.498 1.00 51.07 C
ATOM 8 O4' A A 688 78.416 -55.222 61.317 1.00 51.24 O
ATOM 9 C3' A A 688 76.246 -54.716 61.964 1.00 50.71 C
ATOM 10 O3' A A 688 75.414 -54.160 62.962 1.00 50.39 O
ATOM 11 C2' A A 688 76.622 -53.741 60.856 1.00 50.50 C
ATOM 12 O2' A A 688 76.931 -52.467 61.377 1.00 50.17 O
ATOM 13 C1' A A 688 77.901 -54.356 60.321 1.00 50.91 C
ATOM 14 N9 A A 688 77.635 -55.117 59.096 1.00 51.13 N
ATOM 15 C8 A A 688 77.645 -56.451 58.827 1.00 51.55 C
ATOM 16 N7 A A 688 77.334 -56.744 57.593 1.00 51.63 N
ATOM 17 C5 A A 688 77.071 -55.520 57.037 1.00 51.23 C
ATOM 18 C6 A A 688 76.670 -55.150 55.748 1.00 51.11 C
ATOM 19 N6 A A 688 76.440 -56.054 54.780 1.00 51.41 N
ATOM 20 N1 A A 688 76.506 -53.818 55.496 1.00 50.69 N
ATOM 21 C2 A A 688 76.752 -52.973 56.504 1.00 50.43 C
ATOM 22 N3 A A 688 77.120 -53.218 57.756 1.00 50.51 N
ATOM 23 C4 A A 688 77.249 -54.521 57.951 1.00 50.92 C
ATOM 24 P C A 689 73.923 -54.697 63.142 1.00 43.28 P
ATOM 25 OP1 C A 689 73.350 -53.951 64.260 1.00 42.96 O
ATOM 26 OP2 C A 689 73.977 -56.184 63.231 1.00 43.74 O
ATOM 27 O5' C A 689 73.255 -54.263 61.784 1.00 43.06 O
TER
ATOM 1 O3' C B 919 78.183 -45.105 59.112 1.00 37.27 O
ATOM 2 P U B 920 79.079 -45.931 58.075 1.00 42.65 P
ATOM 3 OP1 U B 920 79.890 -46.878 58.880 1.00 43.01 O
ATOM 4 OP2 U B 920 79.762 -44.952 57.177 1.00 42.56 O
ATOM 5 O5' U B 920 78.011 -46.722 57.238 1.00 42.70 O
ATOM 6 C5' U B 920 77.636 -48.030 57.583 1.00 42.96 C
ATOM 7 C4' U B 920 76.863 -48.624 56.472 1.00 43.04 C
ATOM 8 O4' U B 920 75.883 -47.664 56.032 1.00 42.65 O
ATOM 9 C3' U B 920 77.651 -48.876 55.236 1.00 43.29 C
ATOM 10 O3' U B 920 78.424 -50.044 55.329 1.00 43.74 O
ATOM 11 C2' U B 920 76.570 -48.911 54.161 1.00 43.19 C
ATOM 12 O2' U B 920 75.860 -50.146 54.194 1.00 43.41 O
ATOM 13 C1' U B 920 75.634 -47.835 54.665 1.00 42.72 C
ATOM 14 N1 U B 920 75.818 -46.548 54.008 1.00 42.46 N
ATOM 15 C2 U B 920 75.344 -46.348 52.715 1.00 42.42 C
ATOM 16 O2 U B 920 74.871 -47.232 52.015 1.00 42.62 O
ATOM 17 N3 U B 920 75.530 -45.073 52.260 1.00 42.16 N
ATOM 18 C4 U B 920 76.081 -44.034 52.948 1.00 41.95 C
ATOM 19 O4 U B 920 76.147 -42.953 52.424 1.00 41.74 O
ATOM 20 C5 U B 920 76.486 -44.307 54.277 1.00 42.00 C
ATOM 21 C6 U B 920 76.332 -45.539 54.774 1.00 42.24 C
ATOM 22 P C B 921 79.721 -50.201 54.417 1.00 50.23 P
ATOM 23 OP1 C B 921 80.367 -51.487 54.808 1.00 50.69 O
ATOM 24 OP2 C B 921 80.495 -48.946 54.534 1.00 50.02 O
ATOM 25 O5' C B 921 79.095 -50.335 52.967 1.00 50.25 O
TER
ATOM 2 P A A 688 77.421 -59.092 62.681 1.00 52.28 P
ATOM 3 OP1 A A 688 76.916 -59.297 64.080 1.00 52.26 O
ATOM 4 OP2 A A 688 76.878 -59.945 61.579 1.00 52.49 O
ATOM 5 O5' A A 688 77.316 -57.548 62.261 1.00 51.77 O
ATOM 6 C5' A A 688 77.591 -56.504 63.182 1.00 51.48 C
ATOM 7 C4' A A 688 77.586 -55.168 62.498 1.00 51.07 C
ATOM 8 O4' A A 688 78.416 -55.222 61.317 1.00 51.24 O
ATOM 9 C3' A A 688 76.246 -54.716 61.964 1.00 50.71 C
ATOM 10 O3' A A 688 75.414 -54.160 62.962 1.00 50.39 O
ATOM 11 C2' A A 688 76.622 -53.741 60.856 1.00 50.50 C
ATOM 12 O2' A A 688 76.931 -52.467 61.377 1.00 50.17 O
ATOM 13 C1' A A 688 77.901 -54.356 60.321 1.00 50.91 C
ATOM 14 N9 A A 688 77.635 -55.117 59.096 1.00 51.13 N
ATOM 15 C8 A A 688 77.645 -56.451 58.827 1.00 51.55 C
ATOM 16 N7 A A 688 77.334 -56.744 57.593 1.00 51.63 N
ATOM 17 C5 A A 688 77.071 -55.520 57.037 1.00 51.23 C
ATOM 18 C6 A A 688 76.670 -55.150 55.748 1.00 51.11 C
ATOM 19 N6 A A 688 76.440 -56.054 54.780 1.00 51.41 N
ATOM 20 N1 A A 688 76.506 -53.818 55.496 1.00 50.69 N
ATOM 21 C2 A A 688 76.752 -52.973 56.504 1.00 50.43 C
ATOM 22 N3 A A 688 77.120 -53.218 57.756 1.00 50.51 N
ATOM 23 C4 A A 688 77.249 -54.521 57.951 1.00 50.92 C
ATOM 24 P C A 689 73.923 -54.697 63.142 1.00 43.28 P
ATOM 25 OP1 C A 689 73.350 -53.951 64.260 1.00 42.96 O
ATOM 26 OP2 C A 689 73.977 -56.184 63.231 1.00 43.74 O
ATOM 27 O5' C A 689 73.255 -54.263 61.784 1.00 43.06 O
TER
ATOM 1 O3' C B 919 78.183 -45.105 59.112 1.00 37.27 O
ATOM 2 P U B 920 79.079 -45.931 58.075 1.00 42.65 P
ATOM 3 OP1 U B 920 79.890 -46.878 58.880 1.00 43.01 O
ATOM 4 OP2 U B 920 79.762 -44.952 57.177 1.00 42.56 O
ATOM 5 O5' U B 920 78.011 -46.722 57.238 1.00 42.70 O
ATOM 6 C5' U B 920 77.636 -48.030 57.583 1.00 42.96 C
ATOM 7 C4' U B 920 76.863 -48.624 56.472 1.00 43.04 C
ATOM 8 O4' U B 920 75.883 -47.664 56.032 1.00 42.65 O
ATOM 9 C3' U B 920 77.651 -48.876 55.236 1.00 43.29 C
ATOM 10 O3' U B 920 78.424 -50.044 55.329 1.00 43.74 O
ATOM 11 C2' U B 920 76.570 -48.911 54.161 1.00 43.19 C
ATOM 12 O2' U B 920 75.860 -50.146 54.194 1.00 43.41 O
ATOM 13 C1' U B 920 75.634 -47.835 54.665 1.00 42.72 C
ATOM 14 N1 U B 920 75.818 -46.548 54.008 1.00 42.46 N
ATOM 15 C2 U B 920 75.344 -46.348 52.715 1.00 42.42 C
ATOM 16 O2 U B 920 74.871 -47.232 52.015 1.00 42.62 O
ATOM 17 N3 U B 920 75.530 -45.073 52.260 1.00 42.16 N
ATOM 18 C4 U B 920 76.081 -44.034 52.948 1.00 41.95 C
ATOM 19 O4 U B 920 76.147 -42.953 52.424 1.00 41.74 O
ATOM 20 C5 U B 920 76.486 -44.307 54.277 1.00 42.00 C
ATOM 21 C6 U B 920 76.332 -45.539 54.774 1.00 42.24 C
ATOM 22 P C B 921 79.721 -50.201 54.417 1.00 50.23 P
ATOM 23 OP1 C B 921 80.367 -51.487 54.808 1.00 50.69 O
ATOM 24 OP2 C B 921 80.495 -48.946 54.534 1.00 50.02 O
ATOM 25 O5' C B 921 79.095 -50.335 52.967 1.00 50.25 O
TER
Atoms:
OP1: (76.916,-59.297,64.080)
OP2: (76.878,-59.945,61.579)
C3': (76.246,-54.716,61.964)
C1': (77.901,-54.356,60.321)
C5': (77.591,-56.504,63.182)
O4': (78.416,-55.222,61.317)
C8: (77.645,-56.451,58.827)
O2': (76.931,-52.467,61.377)
C6: (76.670,-55.150,55.748)
C5: (77.071,-55.520,57.037)
C4: (77.249,-54.521,57.951)
P: (77.421,-59.092,62.681)
C4': (77.586,-55.168,62.498)
C2': (76.622,-53.741,60.856)
C2: (76.752,-52.973,56.504)
N1: (76.506,-53.818,55.496)
N3: (77.120,-53.218,57.756)
N6: (76.440,-56.054,54.780)
N7: (77.334,-56.744,57.593)
N9: (77.635,-55.117,59.096)
O5': (77.316,-57.548,62.261)
O3': (75.414,-54.160,62.962)
OP2: (76.878,-59.945,61.579)
C3': (76.246,-54.716,61.964)
C1': (77.901,-54.356,60.321)
C5': (77.591,-56.504,63.182)
O4': (78.416,-55.222,61.317)
C8: (77.645,-56.451,58.827)
O2': (76.931,-52.467,61.377)
C6: (76.670,-55.150,55.748)
C5: (77.071,-55.520,57.037)
C4: (77.249,-54.521,57.951)
P: (77.421,-59.092,62.681)
C4': (77.586,-55.168,62.498)
C2': (76.622,-53.741,60.856)
C2: (76.752,-52.973,56.504)
N1: (76.506,-53.818,55.496)
N3: (77.120,-53.218,57.756)
N6: (76.440,-56.054,54.780)
N7: (77.334,-56.744,57.593)
N9: (77.635,-55.117,59.096)
O5': (77.316,-57.548,62.261)
O3': (75.414,-54.160,62.962)
C4: (76.081,-44.034,52.948)
N3: (75.530,-45.073,52.260)
OP1: (79.890,-46.878,58.880)
OP2: (79.762,-44.952,57.177)
C2: (75.344,-46.348,52.715)
C1': (75.634,-47.835,54.665)
C3': (77.651,-48.876,55.236)
O5': (78.011,-46.722,57.238)
O4': (75.883,-47.664,56.032)
C5': (77.636,-48.030,57.583)
P: (79.079,-45.931,58.075)
C4': (76.863,-48.624,56.472)
C2': (76.570,-48.911,54.161)
O2': (75.860,-50.146,54.194)
N1: (75.818,-46.548,54.008)
O4: (76.147,-42.953,52.424)
O2: (74.871,-47.232,52.015)
C6: (76.332,-45.539,54.774)
C5: (76.486,-44.307,54.277)
O3': (78.424,-50.044,55.329)
N3: (75.530,-45.073,52.260)
OP1: (79.890,-46.878,58.880)
OP2: (79.762,-44.952,57.177)
C2: (75.344,-46.348,52.715)
C1': (75.634,-47.835,54.665)
C3': (77.651,-48.876,55.236)
O5': (78.011,-46.722,57.238)
O4': (75.883,-47.664,56.032)
C5': (77.636,-48.030,57.583)
P: (79.079,-45.931,58.075)
C4': (76.863,-48.624,56.472)
C2': (76.570,-48.911,54.161)
O2': (75.860,-50.146,54.194)
N1: (75.818,-46.548,54.008)
O4: (76.147,-42.953,52.424)
O2: (74.871,-47.232,52.015)
C6: (76.332,-45.539,54.774)
C5: (76.486,-44.307,54.277)
O3': (78.424,-50.044,55.329)
Image (generated by PyMOL):