ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A918:B79

Extra

PDB:
ATOM 1 O3' G A 917 116.738 -89.528-130.887 1.00 52.76 O
ATOM 2 P A A 918 117.123 -88.016-130.464 1.00 58.68 P
ATOM 3 OP1 A A 918 116.237 -87.633-129.346 1.00 66.31 O
ATOM 4 OP2 A A 918 117.108 -87.197-131.705 1.00 67.34 O
ATOM 5 O5' A A 918 118.602 -88.148-129.922 1.00 62.43 O
ATOM 6 C5' A A 918 119.233 -89.404-129.877 1.00 63.34 C
ATOM 7 C4' A A 918 118.905 -90.156-128.616 1.00 54.04 C
ATOM 8 O4' A A 918 119.150 -91.567-128.852 1.00 51.55 O
ATOM 9 C3' A A 918 119.757 -89.784-127.395 1.00 46.30 C
ATOM 10 O3' A A 918 119.103 -88.872-126.532 1.00 55.97 O
ATOM 11 C2' A A 918 120.058 -91.117-126.739 1.00 52.29 C
ATOM 12 O2' A A 918 118.988 -91.511-125.906 1.00 63.17 O
ATOM 13 C1' A A 918 120.093 -92.045-127.942 1.00 60.87 C
ATOM 14 N9 A A 918 121.410 -92.021-128.611 1.00 67.20 N
ATOM 15 C8 A A 918 121.749 -91.316-129.742 1.00 56.57 C
ATOM 16 N7 A A 918 122.984 -91.477-130.119 1.00 55.57 N
ATOM 17 C5 A A 918 123.498 -92.347-129.170 1.00 57.95 C
ATOM 18 C6 A A 918 124.767 -92.921-129.006 1.00 55.24 C
ATOM 19 N6 A A 918 125.784 -92.690-129.830 1.00 56.43 N
ATOM 20 N1 A A 918 124.959 -93.752-127.960 1.00 59.52 N
ATOM 21 C2 A A 918 123.930 -93.985-127.135 1.00 59.01 C
ATOM 22 N3 A A 918 122.692 -93.507-127.183 1.00 58.41 N
ATOM 23 C4 A A 918 122.543 -92.689-128.235 1.00 58.36 C
ATOM 24 P A A 919 119.918 -88.117-125.361 1.00 59.09 P
ATOM 25 OP1 A A 919 118.948 -87.769-124.295 1.00 67.36 O
ATOM 26 OP2 A A 919 120.691 -87.015-126.006 1.00 68.05 O
ATOM 27 O5' A A 919 120.904 -89.239-124.832 1.00 54.29 O
TER

ATOM 1 O3' C B 78 126.513 -98.979-128.245 1.00 61.96 O
ATOM 2 P U B 79 127.709 -99.227-127.204 1.00 60.27 P
ATOM 3 OP1 U B 79 128.945 -99.365-128.010 1.00 75.65 O
ATOM 4 OP2 U B 79 127.308-100.344-126.313 1.00 63.73 O
ATOM 5 O5' U B 79 127.742 -97.865-126.374 1.00 46.88 O
ATOM 6 C5' U B 79 127.399 -96.631-126.981 1.00 51.92 C
ATOM 7 C4' U B 79 126.788 -95.688-125.979 1.00 56.68 C
ATOM 8 O4' U B 79 125.514 -96.209-125.526 1.00 60.55 O
ATOM 9 C3' U B 79 127.583 -95.475-124.693 1.00 60.63 C
ATOM 10 O3' U B 79 128.629 -94.525-124.850 1.00 66.40 O
ATOM 11 C2' U B 79 126.517 -95.039-123.688 1.00 59.61 C
ATOM 12 O2' U B 79 126.322 -93.635-123.749 1.00 57.86 O
ATOM 13 C1' U B 79 125.252 -95.743-124.215 1.00 66.65 C
ATOM 14 N1 U B 79 124.843 -96.882-123.353 1.00 80.17 N
ATOM 15 C2 U B 79 124.297 -96.492-122.159 1.00 79.33 C
ATOM 16 O2 U B 79 124.163 -95.325-121.863 1.00 83.80 O
ATOM 17 N3 U B 79 123.913 -97.493-121.323 1.00 82.41 N
ATOM 18 C4 U B 79 124.016 -98.840-121.550 1.00 85.46 C
ATOM 19 O4 U B 79 123.618 -99.615-120.672 1.00 92.83 O
ATOM 20 C5 U B 79 124.590 -99.177-122.820 1.00 81.07 C
ATOM 21 C6 U B 79 124.979 -98.213-123.664 1.00 80.84 C
ATOM 22 P G B 80 129.842 -94.441-123.783 1.00 62.54 P
ATOM 23 OP1 G B 80 131.003 -93.856-124.512 1.00 62.04 O
ATOM 24 OP2 G B 80 129.987 -95.791-123.162 1.00 51.76 O
ATOM 25 O5' G B 80 129.307 -93.386-122.706 1.00 56.97 O
TER

Atoms:
OP1: (116.237,-87.633,-129.346)
OP2: (117.108,-87.197,-131.705)
C3': (119.757,-89.784,-127.395)
C1': (120.093,-92.045,-127.942)
C5': (119.233,-89.404,-129.877)
O4': (119.150,-91.567,-128.852)
C8: (121.749,-91.316,-129.742)
O2': (118.988,-91.511,-125.906)
C6: (124.767,-92.921,-129.006)
C5: (123.498,-92.347,-129.170)
C4: (122.543,-92.689,-128.235)
P: (117.123,-88.016,-130.464)
C4': (118.905,-90.156,-128.616)
C2': (120.058,-91.117,-126.739)
C2: (123.930,-93.985,-127.135)
N1: (124.959,-93.752,-127.960)
N3: (122.692,-93.507,-127.183)
N6: (125.784,-92.690,-129.830)
N7: (122.984,-91.477,-130.119)
N9: (121.410,-92.021,-128.611)
O5': (118.602,-88.148,-129.922)
O3': (119.103,-88.872,-126.532)
C4: (124.016,-98.840,-121.550)
N3: (123.913,-97.493,-121.323)
OP1: (128.945,-99.365,-128.010)
OP2: (127.308,-100.344,-126.313)
C2: (124.297,-96.492,-122.159)
C1': (125.252,-95.743,-124.215)
C3': (127.583,-95.475,-124.693)
O5': (127.742,-97.865,-126.374)
O4': (125.514,-96.209,-125.526)
C5': (127.399,-96.631,-126.981)
P: (127.709,-99.227,-127.204)
C4': (126.788,-95.688,-125.979)
C2': (126.517,-95.039,-123.688)
O2': (126.322,-93.635,-123.749)
N1: (124.843,-96.882,-123.353)
O4: (123.618,-99.615,-120.672)
O2: (124.163,-95.325,-121.863)
C6: (124.979,-98.213,-123.664)
C5: (124.590,-99.177,-122.820)
O3': (128.629,-94.525,-124.850)
Image (generated by PyMOL):
PyMOL image
show in jmol